| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719303
Identifier: 53719303
GI number: 53719303
Start: 1959699
End: 1960790
Strand: Reverse
Name: 53719303
Synonym: BPSL1679
Alternate gene names: NA
Gene position: 1960790-1959699 (Counterclockwise)
Preceding gene: 53719304
Following gene: 53719302
Centisome position: 48.12
GC content: 68.32
Gene sequence:
>1092_bases ATGGGACGCATCCTGTCTTCGAAGGACGTTGAAGCCGCCGTCAAGGGCGGCTCGGTTTTCGCATGCGGCGGCGGCGGCTG GGCCGACCACGGCCGCGAACTCGGCATGCTCGCGGTCACGATCGGCCGCCCCGAACTGGTCGCCATCGACGAATTGCCGG ACGACGCATGGATCGCCACGGCCGCCGCAATCGGCGCGCCGGGCGGCCTCACCGACTGGCAAATGCTCGGCGCCGACTAC GTGAAGGCCGCTCAGCTCGTGCAGGAAGCGCTCGGCGCACCGCTCGCGGGGCTCATCATCGGGCAGAACGGCATGTCGAG CACGCTTAACGCGTGGCTGCCGTCCGCGCTGCTCGGCGCCAAGGTCGTCGACGCGGTCGCCGATCTGCGCGCCCATCCGA CCGGCGACATGGGCTCGCTCGGTCTCGCGTCGAGCTCCGAACCGATGATCCAGGCAGCCGCCGGAGGCAACCGCGCGAAG CATGCGTACATGGAAGTCGTCGTGCGCGGCGCGACCGCCAAGGTATCGCCGGTATTGCGCAAGGCCGCCGACATGGCCGG CGGCTTCATCGCGAGCTGCCGCAACCCCATCCGCGCATCGTACGTGCGCCGGCATGCGGCGCTCGGCGGCATCAGTCGCG CGCTCGCGCTCGGCGAAGCAATCATCGACGCCGAGCGGCGCGGCGGCAGCGCGGTGATCGATGCGATCTGCGCAGCCACG CAAGGCGAGATCATCGTGAGCGGCAAAGTCGAGCGCAATACGCTCGCCTACACGCGCGAGGCGTTCGACGTCGGACTCGT CTATCTCGGCGAGGGCGCCAAGCGCGCGGTCATTCATGTGATGAACGAACACATGGCGGTAGACGACGCGCACGGCGAGC GGATCGCGACCTACCCCGACGTGATCACGACGCTCGACAGCGACGGCCGCCCTGTCAGCGCCGGGCAGTTAAAGGAAGGG ATGGAGATTCACGTGCTGCGGGTGACGAAGACACACATTCCGCTGTCGTCGTCGGTGTTCGATCCCGCGATCTACCCGCC GGTCGAAACCGCGCTCGGCATCTCGATCGCCGACTATGCGCTCGCCCGCTGA
Upstream 100 bases:
>100_bases CTCAATATTCGGTGTCCCTAGAATCGTTTGGACAGTACCGCCATACAAGGTTTTCCGCCCGGCGCGTACAGCCCTTTCCT CCTATCAGGACAAACGACAC
Downstream 100 bases:
>100_bases ACGCAAAGGCACGGCACGATGAACCGCACCTTCGAAGTCACGTCCGGCGATACGCTGCGCTGCAAAGGCTGGCGCCAGGA GGCGCTGCTGCGTCTTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MGRILSSKDVEAAVKGGSVFACGGGGWADHGRELGMLAVTIGRPELVAIDELPDDAWIATAAAIGAPGGLTDWQMLGADY VKAAQLVQEALGAPLAGLIIGQNGMSSTLNAWLPSALLGAKVVDAVADLRAHPTGDMGSLGLASSSEPMIQAAAGGNRAK HAYMEVVVRGATAKVSPVLRKAADMAGGFIASCRNPIRASYVRRHAALGGISRALALGEAIIDAERRGGSAVIDAICAAT QGEIIVSGKVERNTLAYTREAFDVGLVYLGEGAKRAVIHVMNEHMAVDDAHGERIATYPDVITTLDSDGRPVSAGQLKEG MEIHVLRVTKTHIPLSSSVFDPAIYPPVETALGISIADYALAR
Sequences:
>Translated_363_residues MGRILSSKDVEAAVKGGSVFACGGGGWADHGRELGMLAVTIGRPELVAIDELPDDAWIATAAAIGAPGGLTDWQMLGADY VKAAQLVQEALGAPLAGLIIGQNGMSSTLNAWLPSALLGAKVVDAVADLRAHPTGDMGSLGLASSSEPMIQAAAGGNRAK HAYMEVVVRGATAKVSPVLRKAADMAGGFIASCRNPIRASYVRRHAALGGISRALALGEAIIDAERRGGSAVIDAICAAT QGEIIVSGKVERNTLAYTREAFDVGLVYLGEGAKRAVIHVMNEHMAVDDAHGERIATYPDVITTLDSDGRPVSAGQLKEG MEIHVLRVTKTHIPLSSSVFDPAIYPPVETALGISIADYALAR >Mature_362_residues GRILSSKDVEAAVKGGSVFACGGGGWADHGRELGMLAVTIGRPELVAIDELPDDAWIATAAAIGAPGGLTDWQMLGADYV KAAQLVQEALGAPLAGLIIGQNGMSSTLNAWLPSALLGAKVVDAVADLRAHPTGDMGSLGLASSSEPMIQAAAGGNRAKH AYMEVVVRGATAKVSPVLRKAADMAGGFIASCRNPIRASYVRRHAALGGISRALALGEAIIDAERRGGSAVIDAICAATQ GEIIVSGKVERNTLAYTREAFDVGLVYLGEGAKRAVIHVMNEHMAVDDAHGERIATYPDVITTLDSDGRPVSAGQLKEGM EIHVLRVTKTHIPLSSSVFDPAIYPPVETALGISIADYALAR
Specific function: Unknown
COG id: COG3535
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37517; Mature: 37386
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRILSSKDVEAAVKGGSVFACGGGGWADHGRELGMLAVTIGRPELVAIDELPDDAWIAT CCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHH AAAIGAPGGLTDWQMLGADYVKAAQLVQEALGAPLAGLIIGQNGMSSTLNAWLPSALLGA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHH KVVDAVADLRAHPTGDMGSLGLASSSEPMIQAAAGGNRAKHAYMEVVVRGATAKVSPVLR HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHH KAADMAGGFIASCRNPIRASYVRRHAALGGISRALALGEAIIDAERRGGSAVIDAICAAT HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC QGEIIVSGKVERNTLAYTREAFDVGLVYLGEGAKRAVIHVMNEHMAVDDAHGERIATYPD CCCEEEECCCCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCEEECCCCCEEECCCH VITTLDSDGRPVSAGQLKEGMEIHVLRVTKTHIPLSSSVFDPAIYPPVETALGISIADYA HHHCCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHH LAR HCC >Mature Secondary Structure GRILSSKDVEAAVKGGSVFACGGGGWADHGRELGMLAVTIGRPELVAIDELPDDAWIAT CCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHH AAAIGAPGGLTDWQMLGADYVKAAQLVQEALGAPLAGLIIGQNGMSSTLNAWLPSALLGA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHH KVVDAVADLRAHPTGDMGSLGLASSSEPMIQAAAGGNRAKHAYMEVVVRGATAKVSPVLR HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHH KAADMAGGFIASCRNPIRASYVRRHAALGGISRALALGEAIIDAERRGGSAVIDAICAAT HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC QGEIIVSGKVERNTLAYTREAFDVGLVYLGEGAKRAVIHVMNEHMAVDDAHGERIATYPD CCCEEEECCCCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCEEECCCCCEEECCCH VITTLDSDGRPVSAGQLKEGMEIHVLRVTKTHIPLSSSVFDPAIYPPVETALGISIADYA HHHCCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHH LAR HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA