| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718875
Identifier: 53718875
GI number: 53718875
Start: 1424445
End: 1425113
Strand: Reverse
Name: 53718875
Synonym: BPSL1240
Alternate gene names: NA
Gene position: 1425113-1424445 (Counterclockwise)
Preceding gene: 53718878
Following gene: 53718874
Centisome position: 34.98
GC content: 74.74
Gene sequence:
>669_bases ATGCCCAGCTCCGACGCTCCCCGCGCCGGTCGCCGCGTGGTGCTCGATTCGAACGTCTGGATCGATATCCTCGTGTTCGA CGACCCCGCCGCCCGCCCGATCCGCGATGCCCTCGAGACGGGCGCCATCACGGCGCTCATCGACGTCCGCTGCCTGATCG AGCTCGAACGCGTGCTCGACTACCCGCAGTTCAAGGCGCGCGCGGTCGACAAGGCCGCCGCGCTCGCCACGGTCGCGCGC CTGTCGGAGCGCGTCGCGGGGCCCGAACGCGGCGACGCGCGCGCGCACGCCGCGACGGCGGCGGGCGCGCACGCATCGCC CGCCCTCGCCGCGTCGCCCGCGCACATCGCCGATAGCGGAAATGCGCGAAGCGGCGCGTGCGGCACGCCTGCGCCGCACG CGCGAGCGTGCCCACCGCCTTGCGCCGACGCGGCCGCGCGCGCTCCCGCCGACGACGCACCGCCGCGCCCGCTGCCGAAA TGCCGGGACCGCGACGATCAGAAATTCCTCGAGCTCGCTTATACGGCGCGCGCCGACTGGCTCGTCTCGAAGGATCGCGC GCTGTTGAAGCTCACCCGCCGCACCGAGCGCGACTTCGGCTTCCGGATCGCGCAGCCCGCGCCGTTCGCCGCGAGCGCGC TCGCGGCCGACGCATCCGAGCCGGCGTAA
Upstream 100 bases:
>100_bases TTTCGTAGTCGAGCGATTTCGCCGGGGAGAGAACGATTATCATAGAGGCTCGCCGGCACGCCGTGCCGCGCAATCAGACG AAAACCACCGATTGTAACGA
Downstream 100 bases:
>100_bases GCGACGCACTCGCCCGAGCCGCCCCCACCCCTTTTCGCGCAAGCCATGATGAACGCACCGCACGACATGCCGACGACGCC CACTCTCCTCTCGCGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MPSSDAPRAGRRVVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKAAALATVAR LSERVAGPERGDARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPK CRDRDDQKFLELAYTARADWLVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA
Sequences:
>Translated_222_residues MPSSDAPRAGRRVVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKAAALATVAR LSERVAGPERGDARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPK CRDRDDQKFLELAYTARADWLVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA >Mature_221_residues PSSDAPRAGRRVVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKAAALATVARL SERVAGPERGDARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPKC RDRDDQKFLELAYTARADWLVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23396; Mature: 23264
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSDAPRAGRRVVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLD CCCCCCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHC YPQFKARAVDKAAALATVARLSERVAGPERGDARAHAATAAGAHASPALAASPAHIADSG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCC NARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLELAYTARADW CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA HHHCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCC >Mature Secondary Structure PSSDAPRAGRRVVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLD CCCCCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHC YPQFKARAVDKAAALATVARLSERVAGPERGDARAHAATAAGAHASPALAASPAHIADSG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCC NARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLELAYTARADW CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA HHHCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA