Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53718875

Identifier: 53718875

GI number: 53718875

Start: 1424445

End: 1425113

Strand: Reverse

Name: 53718875

Synonym: BPSL1240

Alternate gene names: NA

Gene position: 1425113-1424445 (Counterclockwise)

Preceding gene: 53718878

Following gene: 53718874

Centisome position: 34.98

GC content: 74.74

Gene sequence:

>669_bases
ATGCCCAGCTCCGACGCTCCCCGCGCCGGTCGCCGCGTGGTGCTCGATTCGAACGTCTGGATCGATATCCTCGTGTTCGA
CGACCCCGCCGCCCGCCCGATCCGCGATGCCCTCGAGACGGGCGCCATCACGGCGCTCATCGACGTCCGCTGCCTGATCG
AGCTCGAACGCGTGCTCGACTACCCGCAGTTCAAGGCGCGCGCGGTCGACAAGGCCGCCGCGCTCGCCACGGTCGCGCGC
CTGTCGGAGCGCGTCGCGGGGCCCGAACGCGGCGACGCGCGCGCGCACGCCGCGACGGCGGCGGGCGCGCACGCATCGCC
CGCCCTCGCCGCGTCGCCCGCGCACATCGCCGATAGCGGAAATGCGCGAAGCGGCGCGTGCGGCACGCCTGCGCCGCACG
CGCGAGCGTGCCCACCGCCTTGCGCCGACGCGGCCGCGCGCGCTCCCGCCGACGACGCACCGCCGCGCCCGCTGCCGAAA
TGCCGGGACCGCGACGATCAGAAATTCCTCGAGCTCGCTTATACGGCGCGCGCCGACTGGCTCGTCTCGAAGGATCGCGC
GCTGTTGAAGCTCACCCGCCGCACCGAGCGCGACTTCGGCTTCCGGATCGCGCAGCCCGCGCCGTTCGCCGCGAGCGCGC
TCGCGGCCGACGCATCCGAGCCGGCGTAA

Upstream 100 bases:

>100_bases
TTTCGTAGTCGAGCGATTTCGCCGGGGAGAGAACGATTATCATAGAGGCTCGCCGGCACGCCGTGCCGCGCAATCAGACG
AAAACCACCGATTGTAACGA

Downstream 100 bases:

>100_bases
GCGACGCACTCGCCCGAGCCGCCCCCACCCCTTTTCGCGCAAGCCATGATGAACGCACCGCACGACATGCCGACGACGCC
CACTCTCCTCTCGCGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MPSSDAPRAGRRVVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKAAALATVAR
LSERVAGPERGDARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPK
CRDRDDQKFLELAYTARADWLVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA

Sequences:

>Translated_222_residues
MPSSDAPRAGRRVVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKAAALATVAR
LSERVAGPERGDARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPK
CRDRDDQKFLELAYTARADWLVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA
>Mature_221_residues
PSSDAPRAGRRVVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLDYPQFKARAVDKAAALATVARL
SERVAGPERGDARAHAATAAGAHASPALAASPAHIADSGNARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPKC
RDRDDQKFLELAYTARADWLVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23396; Mature: 23264

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSDAPRAGRRVVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLD
CCCCCCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
YPQFKARAVDKAAALATVARLSERVAGPERGDARAHAATAAGAHASPALAASPAHIADSG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCC
NARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLELAYTARADW
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA
HHHCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
PSSDAPRAGRRVVLDSNVWIDILVFDDPAARPIRDALETGAITALIDVRCLIELERVLD
CCCCCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
YPQFKARAVDKAAALATVARLSERVAGPERGDARAHAATAAGAHASPALAASPAHIADSG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCC
NARSGACGTPAPHARACPPPCADAAARAPADDAPPRPLPKCRDRDDQKFLELAYTARADW
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LVSKDRALLKLTRRTERDFGFRIAQPAPFAASALAADASEPA
HHHCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA