| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718878
Identifier: 53718878
GI number: 53718878
Start: 1427377
End: 1428036
Strand: Reverse
Name: 53718878
Synonym: BPSL1243
Alternate gene names: NA
Gene position: 1428036-1427377 (Counterclockwise)
Preceding gene: 53718879
Following gene: 53718875
Centisome position: 35.05
GC content: 63.94
Gene sequence:
>660_bases GTGCCTGGTGTCTCTATCGCGTTTATCTCATACCTCCAGATGGACAGTTTTCCCGCCTCGCTTCGCCTGCTCGGCGCGCT CGGCAAGCTGACGGCCTGTGCCGCGGGCCTGTCGCTCGTGCTCGCCGCGCCCGCGTTCGCCGACTTGCTCGATCAACGCG CCGAACTCGTCAACAAGTACGTCAACGAAATGCACGCCGATCCGCTCGTCGCGGATTGCGCCGCGCACGGCAACTTCATC GCCAGCACGTCGAGCGCTTTCGATCACGTCGAATTTGCGCCGAACGCGTTCGACAGCGGCAGCGCATCGATCACGCCCTG GAACGATTCGTTCGACGAAGGCAAGCAGCGCGTGAAAGTCGACAACATCGTGACCGTCGAGGGCCTCGGCGTGCGCGCGA GCGGCGGCGATCCGGAACCTCTGAAGTTCCGCTGCGGCTATGTCGGCACGCAAATGCTCGCGTTCAGTTGGAACGATCCG GTGCCGCCGGCGAAGCCGCGCGTCGAGCGCGCGACGTCATCGAAGAAGAAACTGCGCGCGCACTCGGGCAAAGGCAAGGT CAAGGCGAAAGCGACGGGCAAGAGCGGCAAGCGCGCCGTGTCGAAGAAATCGAGCACGACGAAGAAGGCCGCGAAGAAAC GCTCGACGCGCAAGTCGTGA
Upstream 100 bases:
>100_bases GCGCCATCGTACGCGCGCGCAGGCCATACGGGCAATCGCTCTACTGCGGCGCCAAAAAATTACGCTAAGATGGAACCCTG CTCTTCATCGGGCATCTCAT
Downstream 100 bases:
>100_bases CGCGATCGGCCGAACGCCGGATTCCGGACGACAGGTGCCGGACCGGACCGTCGAGCGCAACCGACGCGTAGCACTCGCCG TCACCCGCCCATCCGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MPGVSIAFISYLQMDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKYVNEMHADPLVADCAAHGNFI ASTSSAFDHVEFAPNAFDSGSASITPWNDSFDEGKQRVKVDNIVTVEGLGVRASGGDPEPLKFRCGYVGTQMLAFSWNDP VPPAKPRVERATSSKKKLRAHSGKGKVKAKATGKSGKRAVSKKSSTTKKAAKKRSTRKS
Sequences:
>Translated_219_residues MPGVSIAFISYLQMDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKYVNEMHADPLVADCAAHGNFI ASTSSAFDHVEFAPNAFDSGSASITPWNDSFDEGKQRVKVDNIVTVEGLGVRASGGDPEPLKFRCGYVGTQMLAFSWNDP VPPAKPRVERATSSKKKLRAHSGKGKVKAKATGKSGKRAVSKKSSTTKKAAKKRSTRKS >Mature_218_residues PGVSIAFISYLQMDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKYVNEMHADPLVADCAAHGNFIA STSSAFDHVEFAPNAFDSGSASITPWNDSFDEGKQRVKVDNIVTVEGLGVRASGGDPEPLKFRCGYVGTQMLAFSWNDPV PPAKPRVERATSSKKKLRAHSGKGKVKAKATGKSGKRAVSKKSSTTKKAAKKRSTRKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23226; Mature: 23095
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGVSIAFISYLQMDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKY CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNEMHADPLVADCAAHGNFIASTSSAFDHVEFAPNAFDSGSASITPWNDSFDEGKQRVKV HHHHCCCCHHHHHHHCCCEEECCCCHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHEEEE DNIVTVEGLGVRASGGDPEPLKFRCGYVGTQMLAFSWNDPVPPAKPRVERATSSKKKLRA CCEEEECCCEEECCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH HSGKGKVKAKATGKSGKRAVSKKSSTTKKAAKKRSTRKS CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PGVSIAFISYLQMDSFPASLRLLGALGKLTACAAGLSLVLAAPAFADLLDQRAELVNKY CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNEMHADPLVADCAAHGNFIASTSSAFDHVEFAPNAFDSGSASITPWNDSFDEGKQRVKV HHHHCCCCHHHHHHHCCCEEECCCCHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHEEEE DNIVTVEGLGVRASGGDPEPLKFRCGYVGTQMLAFSWNDPVPPAKPRVERATSSKKKLRA CCEEEECCCEEECCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH HSGKGKVKAKATGKSGKRAVSKKSSTTKKAAKKRSTRKS CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA