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The map label for this gene is ymfN [H]

Identifier: 53718778

GI number: 53718778

Start: 1329087

End: 1330607

Strand: Reverse

Name: ymfN [H]

Synonym: BPSL1143

Alternate gene names: 53718778

Gene position: 1330607-1329087 (Counterclockwise)

Preceding gene: 53718779

Following gene: 53718777

Centisome position: 32.66

GC content: 62.72

Gene sequence:

>1521_bases
ATGGGAACTCCCCGCGTAAAGCGTGTCTCTCGCGGCGAGCGCAACGCCCGATGGATCGAGGAACACTGCCGCATCCCTGA
AGGCCGGCTCGTCGGGCAGCCCGTCAAGCTCACGAAAGAGCAACGCGGCTGGATCAAGCGAATCTACGACACGCCGACGC
GCACGTTCATCCTCTCGATGGCGCGCAAGAACGCCAAGACGGCCCTCTCCGCATTCCTCGTGTTGCTTCACCTCGTCGGC
CCGGAAGCGCAGCCGAACAGCCAGCTCTACAGCGCAGCGCAGTCGCGCGACCAAGCGGCCGTGCTGTTCGAGCTGGCCGC
GAAGGTGGTTCGCATGTCGGAGGATCTATCGCAGTACGTCACGATCCGCGATACGGCAAAGGAGCTGCTGTGTCATGACC
TTGGCACGATCTACAAGGCGCTGTCGGCGGACGCGGCGACCAAGTTCGGCTTGAGCCCCGCGCTCACGATCCATGACGAG
CTGGGCCAAGTCAAAGGCCCGCGCTCCGAACTGTACGAAGCACTGGAGACGGCGAGCGCTGCGCAGGAAAGTCCGCTGTC
GATCGTTATCAGCACGCAGGCCCCCACCGATGGCGACCTGCTCAGCTTGCTCATCGACGACGCGCTCAGCGGCGCCGATC
CGCGCCTGAAGGTGGCGCTCTATACCGCGCCGCTCGACATGGACCCGTTCAGCGATGAGGCGATCCGACTGGCGAACCCG
CATTTCGATGTGTTCATGAACCGCGAAGAGGTGCGGCGCATGGCGTCGGACGCGAAGCGCCTGCCGAGCCGCGAATCGGC
CTATCGCAACTTGGTTTTGAATCAGCGCGTCGAAGCTCGCAATCCGTTCGTCGCGCGCGCGATCTGGATGGAGAACAGCG
GCGAACCCGCCGAATTGGACGGCGAAGACGTGTATGGCGGCCTCGATCTATCGAGCGTCAGTGACCTGACAGCGCTCGTG
CTGGTGTCGGAGGCCGGCGACGTTCATCCGACATTCTGGCTCCCCGAAGATGGTCTGGAAGCGAAGGCGCGCGCCGATCG
CGTGCCTTATGACGTATGGGCGCGGGACGGCCTGCTTCAGACGACGCCCGGCCGCGCTATCGAATACGAATTCGTCGCCG
AACACTTGCGCGGTGTGTTCGACCGGTGCAACGTGCGCGCGCTCGCGTTCGACCGCTACAACATGCGCTTCCTGAAACCA
TGGCTTGAGCGGGTCGGCTTCTCGGAAGAAGAGCTGAGCCGGTTCGTCGAATTCGGTCAGGGCTTCGTCTCCATGTCACC
GGCTATCCGCGAACTGGAAGCGCGCTTGCTCGCACGCAAGCTGCGGCATGGTGGGCATCCCGTGTTGCAAATGTGCGCCG
TGAACACGGTTGCCGTTTCCGATCCGGCGGGCAACCGCAAATTCACGAAACAGAAGTCGACCGGCCGCATTGACGGCATG
GTGGCTTTGGCGATGGCAGTCGGTGTCACGCAACAAAATGCGACAGAATCCGAAATTGAGCCGCAAATGTTCTTCATTTA
G

Upstream 100 bases:

>100_bases
CCTCGTCGCTCGCGACGCGACTGCGCATCACGCGGCAAGCGGTCGAGCACCCCACGACGGTAGGCCGCGCGCTGGCGAAC
CAGAAGAAGGCAAAGAAACC

Downstream 100 bases:

>100_bases
TCTTGACATTGGCACTTTATGCGTGATAATGACGACACTCACGCAACCAAATGCCAATGAATCGACAAATTTCGAAATTT
ATCACCAAGCAAACCGCAAG

Product: putative phage terminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MGTPRVKRVSRGERNARWIEEHCRIPEGRLVGQPVKLTKEQRGWIKRIYDTPTRTFILSMARKNAKTALSAFLVLLHLVG
PEAQPNSQLYSAAQSRDQAAVLFELAAKVVRMSEDLSQYVTIRDTAKELLCHDLGTIYKALSADAATKFGLSPALTIHDE
LGQVKGPRSELYEALETASAAQESPLSIVISTQAPTDGDLLSLLIDDALSGADPRLKVALYTAPLDMDPFSDEAIRLANP
HFDVFMNREEVRRMASDAKRLPSRESAYRNLVLNQRVEARNPFVARAIWMENSGEPAELDGEDVYGGLDLSSVSDLTALV
LVSEAGDVHPTFWLPEDGLEAKARADRVPYDVWARDGLLQTTPGRAIEYEFVAEHLRGVFDRCNVRALAFDRYNMRFLKP
WLERVGFSEEELSRFVEFGQGFVSMSPAIRELEARLLARKLRHGGHPVLQMCAVNTVAVSDPAGNRKFTKQKSTGRIDGM
VALAMAVGVTQQNATESEIEPQMFFI

Sequences:

>Translated_506_residues
MGTPRVKRVSRGERNARWIEEHCRIPEGRLVGQPVKLTKEQRGWIKRIYDTPTRTFILSMARKNAKTALSAFLVLLHLVG
PEAQPNSQLYSAAQSRDQAAVLFELAAKVVRMSEDLSQYVTIRDTAKELLCHDLGTIYKALSADAATKFGLSPALTIHDE
LGQVKGPRSELYEALETASAAQESPLSIVISTQAPTDGDLLSLLIDDALSGADPRLKVALYTAPLDMDPFSDEAIRLANP
HFDVFMNREEVRRMASDAKRLPSRESAYRNLVLNQRVEARNPFVARAIWMENSGEPAELDGEDVYGGLDLSSVSDLTALV
LVSEAGDVHPTFWLPEDGLEAKARADRVPYDVWARDGLLQTTPGRAIEYEFVAEHLRGVFDRCNVRALAFDRYNMRFLKP
WLERVGFSEEELSRFVEFGQGFVSMSPAIRELEARLLARKLRHGGHPVLQMCAVNTVAVSDPAGNRKFTKQKSTGRIDGM
VALAMAVGVTQQNATESEIEPQMFFI
>Mature_505_residues
GTPRVKRVSRGERNARWIEEHCRIPEGRLVGQPVKLTKEQRGWIKRIYDTPTRTFILSMARKNAKTALSAFLVLLHLVGP
EAQPNSQLYSAAQSRDQAAVLFELAAKVVRMSEDLSQYVTIRDTAKELLCHDLGTIYKALSADAATKFGLSPALTIHDEL
GQVKGPRSELYEALETASAAQESPLSIVISTQAPTDGDLLSLLIDDALSGADPRLKVALYTAPLDMDPFSDEAIRLANPH
FDVFMNREEVRRMASDAKRLPSRESAYRNLVLNQRVEARNPFVARAIWMENSGEPAELDGEDVYGGLDLSSVSDLTALVL
VSEAGDVHPTFWLPEDGLEAKARADRVPYDVWARDGLLQTTPGRAIEYEFVAEHLRGVFDRCNVRALAFDRYNMRFLKPW
LERVGFSEEELSRFVEFGQGFVSMSPAIRELEARLLARKLRHGGHPVLQMCAVNTVAVSDPAGNRKFTKQKSTGRIDGMV
ALAMAVGVTQQNATESEIEPQMFFI

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 56315; Mature: 56184

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTPRVKRVSRGERNARWIEEHCRIPEGRLVGQPVKLTKEQRGWIKRIYDTPTRTFILSM
CCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
ARKNAKTALSAFLVLLHLVGPEAQPNSQLYSAAQSRDQAAVLFELAAKVVRMSEDLSQYV
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TIRDTAKELLCHDLGTIYKALSADAATKFGLSPALTIHDELGQVKGPRSELYEALETASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHH
AQESPLSIVISTQAPTDGDLLSLLIDDALSGADPRLKVALYTAPLDMDPFSDEAIRLANP
HCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEECCC
HFDVFMNREEVRRMASDAKRLPSRESAYRNLVLNQRVEARNPFVARAIWMENSGEPAELD
CHHEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCCCCCCC
GEDVYGGLDLSSVSDLTALVLVSEAGDVHPTFWLPEDGLEAKARADRVPYDVWARDGLLQ
CCCCCCCCCHHHHHHHHHEEEEECCCCCCCEEECCCCCCCHHHHHCCCCHHHHHCCCCEE
TTPGRAIEYEFVAEHLRGVFDRCNVRALAFDRYNMRFLKPWLERVGFSEEELSRFVEFGQ
CCCCCEEEHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
GFVSMSPAIRELEARLLARKLRHGGHPVLQMCAVNTVAVSDPAGNRKFTKQKSTGRIDGM
CHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHH
VALAMAVGVTQQNATESEIEPQMFFI
HHHHHHHHCCCCCCCHHHCCCCEECC
>Mature Secondary Structure 
GTPRVKRVSRGERNARWIEEHCRIPEGRLVGQPVKLTKEQRGWIKRIYDTPTRTFILSM
CCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
ARKNAKTALSAFLVLLHLVGPEAQPNSQLYSAAQSRDQAAVLFELAAKVVRMSEDLSQYV
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TIRDTAKELLCHDLGTIYKALSADAATKFGLSPALTIHDELGQVKGPRSELYEALETASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHH
AQESPLSIVISTQAPTDGDLLSLLIDDALSGADPRLKVALYTAPLDMDPFSDEAIRLANP
HCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEECCC
HFDVFMNREEVRRMASDAKRLPSRESAYRNLVLNQRVEARNPFVARAIWMENSGEPAELD
CHHEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCCCCCCC
GEDVYGGLDLSSVSDLTALVLVSEAGDVHPTFWLPEDGLEAKARADRVPYDVWARDGLLQ
CCCCCCCCCHHHHHHHHHEEEEECCCCCCCEEECCCCCCCHHHHHCCCCHHHHHCCCCEE
TTPGRAIEYEFVAEHLRGVFDRCNVRALAFDRYNMRFLKPWLERVGFSEEELSRFVEFGQ
CCCCCEEEHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
GFVSMSPAIRELEARLLARKLRHGGHPVLQMCAVNTVAVSDPAGNRKFTKQKSTGRIDGM
CHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHH
VALAMAVGVTQQNATESEIEPQMFFI
HHHHHHHHCCCCCCCHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]