Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53718777

Identifier: 53718777

GI number: 53718777

Start: 1327141

End: 1329036

Strand: Reverse

Name: 53718777

Synonym: BPSL1142

Alternate gene names: NA

Gene position: 1329036-1327141 (Counterclockwise)

Preceding gene: 53718778

Following gene: 53718776

Centisome position: 32.62

GC content: 63.66

Gene sequence:

>1896_bases
ATGCCAATGAATCGACAAATTTCGAAATTTATCACCAAGCAAACCGCAAGCGTTTCGAATAAAGCGTTCTCGCGGTTCGA
GGTGAAGAACCTCGACGACGGGTCGCGAGTGCTCAAGGGCATTGCCTCCACGCCGACGCCCGATCGCGCGGGCGATACCG
TCGTCCCGCAAGGCATCCAGTTCAAGACGCCGTTCCCGCTGCTGTGGCAGCACGACCCGAGCAAGCCCATCGGCACCGTC
AACAAAATGACGGTCACAGCGGCCGGCGCGGAGGTTGAGGCGACGATCGCCCCGGCCGGCACTGCCGCTTACATCGACGA
GGCATACAACCTCATCAAAGCCGGTCTGGTGCCGGGCCTGTCCATCGGATTCCGTCCCATCGACGCCGAGTATGACAAGG
CGACTGGCGGCTTCCTCATCAAGTCCTGTGAGCTGTTCGAACTCAGCGCCGTGACGATCCCGGCAAACGCTGACGCCGCA
GTTCAATCGATCAAGGCGCATGACAAGTCCCGCGTGGGAGCGCCCGTCGTGCGTTTGAGTGCTCCCATCATCAAGGAATC
CGACATGACCATTGCTCAACAGCTCGCCGCACTCGCCAAGAAGCGCGCCGATCACCTCGCACGACAAAAGGCGCTGATGG
ATGGCGCAGCGGCCGACGGCACTCGCACGCTCAACGAGAACGAGGCGACGGAGTACGACCAAATCGGCCTCGAACTGAAG
TCGCTCGACACCCACGAAGCACGCCTCAAGGAACAGCAAGCGATCGAGGCCAAGTCGGCCGTTCCGGTCGCTGGCGGCCC
GGCAGCACACTCGCCCGTCATCGTGAAACCGAACGTCACCAAGGGCACGGCGTTCACGCGCTACGCGATCGCGCTCGCGC
GCTCGAAGGGCAACCTCATGCAAGCGGCTGAGATCGCGAAGCAATGGAAGGATTCGACGCCCGAAGTCGAAATCGTGCTC
AAGGCGGCAGTCGCGGCCGGCACGACGACTGATCCGGCGTGGGCCGGGCCGCTCGTCCAGTATCAGGACATGGCCTCCGA
ATTCATCGAACTGCTGCGCCCCGCAACGATCGTCGGCCGGATCGAAGGCATGCGCCGTGTGCCGTTCAACGTACGGGTCC
CCGGCCAGACGACGGGCTCGTCGGTCGGCTGGGTCGGCGAAGGCAAGCCCGCGCCGGTGTCGGCACTCGCATTCAACACG
ACGACGCTCGGCTTCTCGAAGGTGGCAGGCATCGTCGCGATCACGGAAGAGCTTGCGCGCTTCTCGACGCCGAGCGCCGA
AGGCGTCATCCAGCAGGATCTCATCTCGACGATTAGCCAGTTCCTCGACCAGCAGTTCATCGACCCGGCTGTGGCGGCCG
GCGCGAACGGACTGTCGCCCGCGTCGATCACGAACGGCGTCAAGGCCATTCCGGCATCGGGCAAGGATGCGGCAGCCGTG
CGCGCGGACGTGAAGAAGGTATTCCAGGCATACATCGCGGCCAACCTGTCGGTCGCGGGCGCGGTCTGGATCATGTCGGA
AACGACGGCTCTGTCGCTCTCGCTGATGCTGAATGTGATGGCGCAACCGGAATTTCCGGGCCTGACGATGGCGGGCGGCA
CATTCTTCGGTCTGCCCGCGATCCTCTCGCAGACGGTCGGCGACAACATCGTGCTTGCGAAGGCAAGCGAAATCCTGTTC
GCCGACGACGGCGGTGTGACGCTCGACGTGAGCCGCGAAGCATCGCTGCAAATGGACAGCGCACCCGTTGCCGGTGCAAC
GGAGCTGGTGTCGCTGTGGCAAAACGGCTTCATCGCCATGAAGGCCGAGCGCTTCATCAACTGGAAGCGCCGCCGCGTCG
AGGGCGTTCAGTACATCTCCGGCGCGGCCTACGGCGACGCAGCGCAAGCGGGCTAA

Upstream 100 bases:

>100_bases
AACAAAATGCGACAGAATCCGAAATTGAGCCGCAAATGTTCTTCATTTAGTCTTGACATTGGCACTTTATGCGTGATAAT
GACGACACTCACGCAACCAA

Downstream 100 bases:

>100_bases
GCGGAGAACGCCATGCAAACCTATGAGGTGGCCGTGGCGTTCCCGTACAAGGGACGCATGCGGCAAGTTGGCGAGCGGAT
CGAGGTCGAACAAGAACAGC

Product: putative phage-like protein

Products: NA

Alternate protein names: Phage Head Protein/Prohead Proteinase; Caudovirus Prohead Protease; Phage-Related Protein; Phage Capsid Protein HK; HK97 Family Phage Prohead Protease; Phage Prohead Protease; Phage Head Maturation Protease; Bacteriophage Protein; Head Protein/Prohead Protease; Peptidase U

Number of amino acids: Translated: 631; Mature: 630

Protein sequence:

>631_residues
MPMNRQISKFITKQTASVSNKAFSRFEVKNLDDGSRVLKGIASTPTPDRAGDTVVPQGIQFKTPFPLLWQHDPSKPIGTV
NKMTVTAAGAEVEATIAPAGTAAYIDEAYNLIKAGLVPGLSIGFRPIDAEYDKATGGFLIKSCELFELSAVTIPANADAA
VQSIKAHDKSRVGAPVVRLSAPIIKESDMTIAQQLAALAKKRADHLARQKALMDGAAADGTRTLNENEATEYDQIGLELK
SLDTHEARLKEQQAIEAKSAVPVAGGPAAHSPVIVKPNVTKGTAFTRYAIALARSKGNLMQAAEIAKQWKDSTPEVEIVL
KAAVAAGTTTDPAWAGPLVQYQDMASEFIELLRPATIVGRIEGMRRVPFNVRVPGQTTGSSVGWVGEGKPAPVSALAFNT
TTLGFSKVAGIVAITEELARFSTPSAEGVIQQDLISTISQFLDQQFIDPAVAAGANGLSPASITNGVKAIPASGKDAAAV
RADVKKVFQAYIAANLSVAGAVWIMSETTALSLSLMLNVMAQPEFPGLTMAGGTFFGLPAILSQTVGDNIVLAKASEILF
ADDGGVTLDVSREASLQMDSAPVAGATELVSLWQNGFIAMKAERFINWKRRRVEGVQYISGAAYGDAAQAG

Sequences:

>Translated_631_residues
MPMNRQISKFITKQTASVSNKAFSRFEVKNLDDGSRVLKGIASTPTPDRAGDTVVPQGIQFKTPFPLLWQHDPSKPIGTV
NKMTVTAAGAEVEATIAPAGTAAYIDEAYNLIKAGLVPGLSIGFRPIDAEYDKATGGFLIKSCELFELSAVTIPANADAA
VQSIKAHDKSRVGAPVVRLSAPIIKESDMTIAQQLAALAKKRADHLARQKALMDGAAADGTRTLNENEATEYDQIGLELK
SLDTHEARLKEQQAIEAKSAVPVAGGPAAHSPVIVKPNVTKGTAFTRYAIALARSKGNLMQAAEIAKQWKDSTPEVEIVL
KAAVAAGTTTDPAWAGPLVQYQDMASEFIELLRPATIVGRIEGMRRVPFNVRVPGQTTGSSVGWVGEGKPAPVSALAFNT
TTLGFSKVAGIVAITEELARFSTPSAEGVIQQDLISTISQFLDQQFIDPAVAAGANGLSPASITNGVKAIPASGKDAAAV
RADVKKVFQAYIAANLSVAGAVWIMSETTALSLSLMLNVMAQPEFPGLTMAGGTFFGLPAILSQTVGDNIVLAKASEILF
ADDGGVTLDVSREASLQMDSAPVAGATELVSLWQNGFIAMKAERFINWKRRRVEGVQYISGAAYGDAAQAG
>Mature_630_residues
PMNRQISKFITKQTASVSNKAFSRFEVKNLDDGSRVLKGIASTPTPDRAGDTVVPQGIQFKTPFPLLWQHDPSKPIGTVN
KMTVTAAGAEVEATIAPAGTAAYIDEAYNLIKAGLVPGLSIGFRPIDAEYDKATGGFLIKSCELFELSAVTIPANADAAV
QSIKAHDKSRVGAPVVRLSAPIIKESDMTIAQQLAALAKKRADHLARQKALMDGAAADGTRTLNENEATEYDQIGLELKS
LDTHEARLKEQQAIEAKSAVPVAGGPAAHSPVIVKPNVTKGTAFTRYAIALARSKGNLMQAAEIAKQWKDSTPEVEIVLK
AAVAAGTTTDPAWAGPLVQYQDMASEFIELLRPATIVGRIEGMRRVPFNVRVPGQTTGSSVGWVGEGKPAPVSALAFNTT
TLGFSKVAGIVAITEELARFSTPSAEGVIQQDLISTISQFLDQQFIDPAVAAGANGLSPASITNGVKAIPASGKDAAAVR
ADVKKVFQAYIAANLSVAGAVWIMSETTALSLSLMLNVMAQPEFPGLTMAGGTFFGLPAILSQTVGDNIVLAKASEILFA
DDGGVTLDVSREASLQMDSAPVAGATELVSLWQNGFIAMKAERFINWKRRRVEGVQYISGAAYGDAAQAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66386; Mature: 66255

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMNRQISKFITKQTASVSNKAFSRFEVKNLDDGSRVLKGIASTPTPDRAGDTVVPQGIQ
CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEE
FKTPFPLLWQHDPSKPIGTVNKMTVTAAGAEVEATIAPAGTAAYIDEAYNLIKAGLVPGL
ECCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
SIGFRPIDAEYDKATGGFLIKSCELFELSAVTIPANADAAVQSIKAHDKSRVGAPVVRLS
CCCCEECCCCCCCCCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEC
APIIKESDMTIAQQLAALAKKRADHLARQKALMDGAAADGTRTLNENEATEYDQIGLELK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEE
SLDTHEARLKEQQAIEAKSAVPVAGGPAAHSPVIVKPNVTKGTAFTRYAIALARSKGNLM
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHH
QAAEIAKQWKDSTPEVEIVLKAAVAAGTTTDPAWAGPLVQYQDMASEFIELLRPATIVGR
HHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
IEGMRRVPFNVRVPGQTTGSSVGWVGEGKPAPVSALAFNTTTLGFSKVAGIVAITEELAR
HCCCEECCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCHHCCHHHHHHHHHHHHHHHH
FSTPSAEGVIQQDLISTISQFLDQQFIDPAVAAGANGLSPASITNGVKAIPASGKDAAAV
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHCCCCEECCCCCCCHHHH
RADVKKVFQAYIAANLSVAGAVWIMSETTALSLSLMLNVMAQPEFPGLTMAGGTFFGLPA
HHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
ILSQTVGDNIVLAKASEILFADDGGVTLDVSREASLQMDSAPVAGATELVSLWQNGFIAM
HHHHHCCCCEEEEECCEEEEECCCCEEEEECCCCCCEECCCCCCCHHHHHHHHHCCEEEE
KAERFINWKRRRVEGVQYISGAAYGDAAQAG
EHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PMNRQISKFITKQTASVSNKAFSRFEVKNLDDGSRVLKGIASTPTPDRAGDTVVPQGIQ
CCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEE
FKTPFPLLWQHDPSKPIGTVNKMTVTAAGAEVEATIAPAGTAAYIDEAYNLIKAGLVPGL
ECCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
SIGFRPIDAEYDKATGGFLIKSCELFELSAVTIPANADAAVQSIKAHDKSRVGAPVVRLS
CCCCEECCCCCCCCCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEC
APIIKESDMTIAQQLAALAKKRADHLARQKALMDGAAADGTRTLNENEATEYDQIGLELK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEE
SLDTHEARLKEQQAIEAKSAVPVAGGPAAHSPVIVKPNVTKGTAFTRYAIALARSKGNLM
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHH
QAAEIAKQWKDSTPEVEIVLKAAVAAGTTTDPAWAGPLVQYQDMASEFIELLRPATIVGR
HHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
IEGMRRVPFNVRVPGQTTGSSVGWVGEGKPAPVSALAFNTTTLGFSKVAGIVAITEELAR
HCCCEECCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCHHCCHHHHHHHHHHHHHHHH
FSTPSAEGVIQQDLISTISQFLDQQFIDPAVAAGANGLSPASITNGVKAIPASGKDAAAV
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHCCCCEECCCCCCCHHHH
RADVKKVFQAYIAANLSVAGAVWIMSETTALSLSLMLNVMAQPEFPGLTMAGGTFFGLPA
HHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
ILSQTVGDNIVLAKASEILFADDGGVTLDVSREASLQMDSAPVAGATELVSLWQNGFIAM
HHHHHCCCCEEEEECCEEEEECCCCEEEEECCCCCCEECCCCCCCHHHHHHHHHCCEEEE
KAERFINWKRRRVEGVQYISGAAYGDAAQAG
EHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA