| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718777
Identifier: 53718777
GI number: 53718777
Start: 1327141
End: 1329036
Strand: Reverse
Name: 53718777
Synonym: BPSL1142
Alternate gene names: NA
Gene position: 1329036-1327141 (Counterclockwise)
Preceding gene: 53718778
Following gene: 53718776
Centisome position: 32.62
GC content: 63.66
Gene sequence:
>1896_bases ATGCCAATGAATCGACAAATTTCGAAATTTATCACCAAGCAAACCGCAAGCGTTTCGAATAAAGCGTTCTCGCGGTTCGA GGTGAAGAACCTCGACGACGGGTCGCGAGTGCTCAAGGGCATTGCCTCCACGCCGACGCCCGATCGCGCGGGCGATACCG TCGTCCCGCAAGGCATCCAGTTCAAGACGCCGTTCCCGCTGCTGTGGCAGCACGACCCGAGCAAGCCCATCGGCACCGTC AACAAAATGACGGTCACAGCGGCCGGCGCGGAGGTTGAGGCGACGATCGCCCCGGCCGGCACTGCCGCTTACATCGACGA GGCATACAACCTCATCAAAGCCGGTCTGGTGCCGGGCCTGTCCATCGGATTCCGTCCCATCGACGCCGAGTATGACAAGG CGACTGGCGGCTTCCTCATCAAGTCCTGTGAGCTGTTCGAACTCAGCGCCGTGACGATCCCGGCAAACGCTGACGCCGCA GTTCAATCGATCAAGGCGCATGACAAGTCCCGCGTGGGAGCGCCCGTCGTGCGTTTGAGTGCTCCCATCATCAAGGAATC CGACATGACCATTGCTCAACAGCTCGCCGCACTCGCCAAGAAGCGCGCCGATCACCTCGCACGACAAAAGGCGCTGATGG ATGGCGCAGCGGCCGACGGCACTCGCACGCTCAACGAGAACGAGGCGACGGAGTACGACCAAATCGGCCTCGAACTGAAG TCGCTCGACACCCACGAAGCACGCCTCAAGGAACAGCAAGCGATCGAGGCCAAGTCGGCCGTTCCGGTCGCTGGCGGCCC GGCAGCACACTCGCCCGTCATCGTGAAACCGAACGTCACCAAGGGCACGGCGTTCACGCGCTACGCGATCGCGCTCGCGC GCTCGAAGGGCAACCTCATGCAAGCGGCTGAGATCGCGAAGCAATGGAAGGATTCGACGCCCGAAGTCGAAATCGTGCTC AAGGCGGCAGTCGCGGCCGGCACGACGACTGATCCGGCGTGGGCCGGGCCGCTCGTCCAGTATCAGGACATGGCCTCCGA ATTCATCGAACTGCTGCGCCCCGCAACGATCGTCGGCCGGATCGAAGGCATGCGCCGTGTGCCGTTCAACGTACGGGTCC CCGGCCAGACGACGGGCTCGTCGGTCGGCTGGGTCGGCGAAGGCAAGCCCGCGCCGGTGTCGGCACTCGCATTCAACACG ACGACGCTCGGCTTCTCGAAGGTGGCAGGCATCGTCGCGATCACGGAAGAGCTTGCGCGCTTCTCGACGCCGAGCGCCGA AGGCGTCATCCAGCAGGATCTCATCTCGACGATTAGCCAGTTCCTCGACCAGCAGTTCATCGACCCGGCTGTGGCGGCCG GCGCGAACGGACTGTCGCCCGCGTCGATCACGAACGGCGTCAAGGCCATTCCGGCATCGGGCAAGGATGCGGCAGCCGTG CGCGCGGACGTGAAGAAGGTATTCCAGGCATACATCGCGGCCAACCTGTCGGTCGCGGGCGCGGTCTGGATCATGTCGGA AACGACGGCTCTGTCGCTCTCGCTGATGCTGAATGTGATGGCGCAACCGGAATTTCCGGGCCTGACGATGGCGGGCGGCA CATTCTTCGGTCTGCCCGCGATCCTCTCGCAGACGGTCGGCGACAACATCGTGCTTGCGAAGGCAAGCGAAATCCTGTTC GCCGACGACGGCGGTGTGACGCTCGACGTGAGCCGCGAAGCATCGCTGCAAATGGACAGCGCACCCGTTGCCGGTGCAAC GGAGCTGGTGTCGCTGTGGCAAAACGGCTTCATCGCCATGAAGGCCGAGCGCTTCATCAACTGGAAGCGCCGCCGCGTCG AGGGCGTTCAGTACATCTCCGGCGCGGCCTACGGCGACGCAGCGCAAGCGGGCTAA
Upstream 100 bases:
>100_bases AACAAAATGCGACAGAATCCGAAATTGAGCCGCAAATGTTCTTCATTTAGTCTTGACATTGGCACTTTATGCGTGATAAT GACGACACTCACGCAACCAA
Downstream 100 bases:
>100_bases GCGGAGAACGCCATGCAAACCTATGAGGTGGCCGTGGCGTTCCCGTACAAGGGACGCATGCGGCAAGTTGGCGAGCGGAT CGAGGTCGAACAAGAACAGC
Product: putative phage-like protein
Products: NA
Alternate protein names: Phage Head Protein/Prohead Proteinase; Caudovirus Prohead Protease; Phage-Related Protein; Phage Capsid Protein HK; HK97 Family Phage Prohead Protease; Phage Prohead Protease; Phage Head Maturation Protease; Bacteriophage Protein; Head Protein/Prohead Protease; Peptidase U
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MPMNRQISKFITKQTASVSNKAFSRFEVKNLDDGSRVLKGIASTPTPDRAGDTVVPQGIQFKTPFPLLWQHDPSKPIGTV NKMTVTAAGAEVEATIAPAGTAAYIDEAYNLIKAGLVPGLSIGFRPIDAEYDKATGGFLIKSCELFELSAVTIPANADAA VQSIKAHDKSRVGAPVVRLSAPIIKESDMTIAQQLAALAKKRADHLARQKALMDGAAADGTRTLNENEATEYDQIGLELK SLDTHEARLKEQQAIEAKSAVPVAGGPAAHSPVIVKPNVTKGTAFTRYAIALARSKGNLMQAAEIAKQWKDSTPEVEIVL KAAVAAGTTTDPAWAGPLVQYQDMASEFIELLRPATIVGRIEGMRRVPFNVRVPGQTTGSSVGWVGEGKPAPVSALAFNT TTLGFSKVAGIVAITEELARFSTPSAEGVIQQDLISTISQFLDQQFIDPAVAAGANGLSPASITNGVKAIPASGKDAAAV RADVKKVFQAYIAANLSVAGAVWIMSETTALSLSLMLNVMAQPEFPGLTMAGGTFFGLPAILSQTVGDNIVLAKASEILF ADDGGVTLDVSREASLQMDSAPVAGATELVSLWQNGFIAMKAERFINWKRRRVEGVQYISGAAYGDAAQAG
Sequences:
>Translated_631_residues MPMNRQISKFITKQTASVSNKAFSRFEVKNLDDGSRVLKGIASTPTPDRAGDTVVPQGIQFKTPFPLLWQHDPSKPIGTV NKMTVTAAGAEVEATIAPAGTAAYIDEAYNLIKAGLVPGLSIGFRPIDAEYDKATGGFLIKSCELFELSAVTIPANADAA VQSIKAHDKSRVGAPVVRLSAPIIKESDMTIAQQLAALAKKRADHLARQKALMDGAAADGTRTLNENEATEYDQIGLELK SLDTHEARLKEQQAIEAKSAVPVAGGPAAHSPVIVKPNVTKGTAFTRYAIALARSKGNLMQAAEIAKQWKDSTPEVEIVL KAAVAAGTTTDPAWAGPLVQYQDMASEFIELLRPATIVGRIEGMRRVPFNVRVPGQTTGSSVGWVGEGKPAPVSALAFNT TTLGFSKVAGIVAITEELARFSTPSAEGVIQQDLISTISQFLDQQFIDPAVAAGANGLSPASITNGVKAIPASGKDAAAV RADVKKVFQAYIAANLSVAGAVWIMSETTALSLSLMLNVMAQPEFPGLTMAGGTFFGLPAILSQTVGDNIVLAKASEILF ADDGGVTLDVSREASLQMDSAPVAGATELVSLWQNGFIAMKAERFINWKRRRVEGVQYISGAAYGDAAQAG >Mature_630_residues PMNRQISKFITKQTASVSNKAFSRFEVKNLDDGSRVLKGIASTPTPDRAGDTVVPQGIQFKTPFPLLWQHDPSKPIGTVN KMTVTAAGAEVEATIAPAGTAAYIDEAYNLIKAGLVPGLSIGFRPIDAEYDKATGGFLIKSCELFELSAVTIPANADAAV QSIKAHDKSRVGAPVVRLSAPIIKESDMTIAQQLAALAKKRADHLARQKALMDGAAADGTRTLNENEATEYDQIGLELKS LDTHEARLKEQQAIEAKSAVPVAGGPAAHSPVIVKPNVTKGTAFTRYAIALARSKGNLMQAAEIAKQWKDSTPEVEIVLK AAVAAGTTTDPAWAGPLVQYQDMASEFIELLRPATIVGRIEGMRRVPFNVRVPGQTTGSSVGWVGEGKPAPVSALAFNTT TLGFSKVAGIVAITEELARFSTPSAEGVIQQDLISTISQFLDQQFIDPAVAAGANGLSPASITNGVKAIPASGKDAAAVR ADVKKVFQAYIAANLSVAGAVWIMSETTALSLSLMLNVMAQPEFPGLTMAGGTFFGLPAILSQTVGDNIVLAKASEILFA DDGGVTLDVSREASLQMDSAPVAGATELVSLWQNGFIAMKAERFINWKRRRVEGVQYISGAAYGDAAQAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66386; Mature: 66255
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMNRQISKFITKQTASVSNKAFSRFEVKNLDDGSRVLKGIASTPTPDRAGDTVVPQGIQ CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEE FKTPFPLLWQHDPSKPIGTVNKMTVTAAGAEVEATIAPAGTAAYIDEAYNLIKAGLVPGL ECCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC SIGFRPIDAEYDKATGGFLIKSCELFELSAVTIPANADAAVQSIKAHDKSRVGAPVVRLS CCCCEECCCCCCCCCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEC APIIKESDMTIAQQLAALAKKRADHLARQKALMDGAAADGTRTLNENEATEYDQIGLELK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEE SLDTHEARLKEQQAIEAKSAVPVAGGPAAHSPVIVKPNVTKGTAFTRYAIALARSKGNLM CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHH QAAEIAKQWKDSTPEVEIVLKAAVAAGTTTDPAWAGPLVQYQDMASEFIELLRPATIVGR HHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH IEGMRRVPFNVRVPGQTTGSSVGWVGEGKPAPVSALAFNTTTLGFSKVAGIVAITEELAR HCCCEECCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCHHCCHHHHHHHHHHHHHHHH FSTPSAEGVIQQDLISTISQFLDQQFIDPAVAAGANGLSPASITNGVKAIPASGKDAAAV CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHCCCCEECCCCCCCHHHH RADVKKVFQAYIAANLSVAGAVWIMSETTALSLSLMLNVMAQPEFPGLTMAGGTFFGLPA HHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH ILSQTVGDNIVLAKASEILFADDGGVTLDVSREASLQMDSAPVAGATELVSLWQNGFIAM HHHHHCCCCEEEEECCEEEEECCCCEEEEECCCCCCEECCCCCCCHHHHHHHHHCCEEEE KAERFINWKRRRVEGVQYISGAAYGDAAQAG EHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PMNRQISKFITKQTASVSNKAFSRFEVKNLDDGSRVLKGIASTPTPDRAGDTVVPQGIQ CCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEE FKTPFPLLWQHDPSKPIGTVNKMTVTAAGAEVEATIAPAGTAAYIDEAYNLIKAGLVPGL ECCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC SIGFRPIDAEYDKATGGFLIKSCELFELSAVTIPANADAAVQSIKAHDKSRVGAPVVRLS CCCCEECCCCCCCCCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEC APIIKESDMTIAQQLAALAKKRADHLARQKALMDGAAADGTRTLNENEATEYDQIGLELK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEE SLDTHEARLKEQQAIEAKSAVPVAGGPAAHSPVIVKPNVTKGTAFTRYAIALARSKGNLM CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHH QAAEIAKQWKDSTPEVEIVLKAAVAAGTTTDPAWAGPLVQYQDMASEFIELLRPATIVGR HHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH IEGMRRVPFNVRVPGQTTGSSVGWVGEGKPAPVSALAFNTTTLGFSKVAGIVAITEELAR HCCCEECCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCHHCCHHHHHHHHHHHHHHHH FSTPSAEGVIQQDLISTISQFLDQQFIDPAVAAGANGLSPASITNGVKAIPASGKDAAAV CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHCCCCEECCCCCCCHHHH RADVKKVFQAYIAANLSVAGAVWIMSETTALSLSLMLNVMAQPEFPGLTMAGGTFFGLPA HHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH ILSQTVGDNIVLAKASEILFADDGGVTLDVSREASLQMDSAPVAGATELVSLWQNGFIAM HHHHHCCCCEEEEECCEEEEECCCCEEEEECCCCCCEECCCCCCCHHHHHHHHHCCEEEE KAERFINWKRRRVEGVQYISGAAYGDAAQAG EHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA