Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53718779

Identifier: 53718779

GI number: 53718779

Start: 1330589

End: 1331029

Strand: Reverse

Name: 53718779

Synonym: BPSL1144

Alternate gene names: NA

Gene position: 1331029-1330589 (Counterclockwise)

Preceding gene: 53718780

Following gene: 53718778

Centisome position: 32.67

GC content: 65.99

Gene sequence:

>441_bases
ATGGCTCAACGCGGGCGGAAATCCGCCGCATCGATCGTAACGGCGCCAGCAGCACCGGTTGCGTCGGAGCAGCGTCTCGC
GCCCCCGCTTCACCTGAGCGACGGCGAGCGGGCAGTCTGGGTCGAAGTCGTGAACGATCAGCCGGCAAGCGCATTCACTG
CGACGCACTCGCCGCTGCTCGAGCTGTATTGCCGACACATCACGAACGCGCGCGTGCTCGCCGACGAAGTGCTGAATTTC
GATCGCGCATGGCTCGCAGACGACGACGGCCTGAAACGCTACGACCGACTGCTCGCAATGTCTGAGCGCGAGAGCCGCGC
GGCCTCGTCGCTCGCGACGCGACTGCGCATCACGCGGCAAGCGGTCGAGCACCCCACGACGGTAGGCCGCGCGCTGGCGA
ACCAGAAGAAGGCAAAGAAACCATGGGAACTCCCCGCGTAA

Upstream 100 bases:

>100_bases
CGACCCCGGCCGGGGGGGGATGGTCGATTTTTCTTGCGTCGCATCGCGGGAAACCGCCCGTCCCCTTCGCTTTCATAAAC
GTGGACAAAAAAGGGAAAAA

Downstream 100 bases:

>100_bases
AGCGTGTCTCTCGCGGCGAGCGCAACGCCCGATGGATCGAGGAACACTGCCGCATCCCTGAAGGCCGGCTCGTCGGGCAG
CCCGTCAAGCTCACGAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MAQRGRKSAASIVTAPAAPVASEQRLAPPLHLSDGERAVWVEVVNDQPASAFTATHSPLLELYCRHITNARVLADEVLNF
DRAWLADDDGLKRYDRLLAMSERESRAASSLATRLRITRQAVEHPTTVGRALANQKKAKKPWELPA

Sequences:

>Translated_146_residues
MAQRGRKSAASIVTAPAAPVASEQRLAPPLHLSDGERAVWVEVVNDQPASAFTATHSPLLELYCRHITNARVLADEVLNF
DRAWLADDDGLKRYDRLLAMSERESRAASSLATRLRITRQAVEHPTTVGRALANQKKAKKPWELPA
>Mature_145_residues
AQRGRKSAASIVTAPAAPVASEQRLAPPLHLSDGERAVWVEVVNDQPASAFTATHSPLLELYCRHITNARVLADEVLNFD
RAWLADDDGLKRYDRLLAMSERESRAASSLATRLRITRQAVEHPTTVGRALANQKKAKKPWELPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16103; Mature: 15972

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRGRKSAASIVTAPAAPVASEQRLAPPLHLSDGERAVWVEVVNDQPASAFTATHSPLL
CCCCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHCHHHHH
ELYCRHITNARVLADEVLNFDRAWLADDDGLKRYDRLLAMSERESRAASSLATRLRITRQ
HHHHHHHCCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVEHPTTVGRALANQKKAKKPWELPA
HHHCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AQRGRKSAASIVTAPAAPVASEQRLAPPLHLSDGERAVWVEVVNDQPASAFTATHSPLL
CCCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHCHHHHH
ELYCRHITNARVLADEVLNFDRAWLADDDGLKRYDRLLAMSERESRAASSLATRLRITRQ
HHHHHHHCCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVEHPTTVGRALANQKKAKKPWELPA
HHHCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA