| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718764
Identifier: 53718764
GI number: 53718764
Start: 1311772
End: 1312755
Strand: Reverse
Name: 53718764
Synonym: BPSL1128
Alternate gene names: NA
Gene position: 1312755-1311772 (Counterclockwise)
Preceding gene: 53718765
Following gene: 53718763
Centisome position: 32.22
GC content: 74.9
Gene sequence:
>984_bases TTGATGAGCGGCGGATTCCCGCGTTCTGCCTTCCGTCTTCCCCGTCCCGTCGCCGCTGCGGCACCCGTCGTCCTCGCCAC GCTCGCGCTGTCCGGTTGCGCGCTGTTCCGCGCGCCGCAAGCGAGCGCGCCCGTCGTGGAAGCCGTCGCCGTGCCCGTCG AGCCGGCGAGCGAGCCCATCGCGGCGCCCGAGCCCGCGAGCGCGCCCGAACCCGCCGAGACCGCGCCGCCGAAGAAGCCG CACCGCGAGGCCGCGCCGCCGCGCAAGCCCGCGCGCGTCGCGCCGCCGGCGCCCGCGCCGGCCCCCGCGCCCGCGCCGCT CGTGACGACGCGCGCAATCGAGCGCAGCCAGGTGCACGCGCTCCTCGACAGCGAGGTGCGGCGCGGCGGCAAGGTGATCG GCCGCGCGGTCGACATGACGGCGGACGCGAACGGCGCGCCGCGCGAGATGCTGGTGAACCTGCAAGGCTTCATGGGCGTC GGCGACCGCAAGGTCAGCTTCCCGTGGAAGCTGTTTCGCTTCACGCCGGGCGGCAGGCACGAGCCGGTCATCCTCGACAT GCCGGCCACTGCGCAGTTGCAGCCCGCCGACCGTCCGAAGGCGGTGCCGCTCACGGGCTCGACGCAGGCGGGCGCCGAAC CCGGCCAGATGCGGATCATCGACGCCGACGTCGAGCGCCCGAACGGCGCGAAGGTCGGCCGCGTCGTCGACGTGCTGATC GGCCGCGATGCGCAACCACAGGCGGTCGTGCTCGACGTCGGCGGCCTCGTCGATCCGGACCGGCGCACGATCGCCGCGAA CTGGTCGGCGCTGCGCTTCGCGCCGAAGGACAAATCGCTGCGCGCGCTGCTCGACCTGAACGACGCGCAACTGAAGGCGT CGCCGCCCTATGCGGGCGACAAGCCGATCCTCGCCGTCTCGCCCGCGGCCGGCGGCGCTCCCGCCGCCGCGCCGGCTACC GCTCGAGCAGGTGCGAAACGATGA
Upstream 100 bases:
>100_bases CTCACAGGTTAAACTCTGTCCTCCCGCGATGCCCTTCGGGCGTCAGCCATCATCGCCAGCGGCGCGCCCACCCGGCTCGC CCCCGTCCATGGAGTATTGC
Downstream 100 bases:
>100_bases CGGTCCGGCATACGGTCAGCGCGCGTAGCCTGCGCGCCCTCGACTGGCTCAACTTCTTCGTCGCGAACGTGCAGACAGGC TTCGGTCCGTTCATCGCGTC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MMSGGFPRSAFRLPRPVAAAAPVVLATLALSGCALFRAPQASAPVVEAVAVPVEPASEPIAAPEPASAPEPAETAPPKKP HREAAPPRKPARVAPPAPAPAPAPAPLVTTRAIERSQVHALLDSEVRRGGKVIGRAVDMTADANGAPREMLVNLQGFMGV GDRKVSFPWKLFRFTPGGRHEPVILDMPATAQLQPADRPKAVPLTGSTQAGAEPGQMRIIDADVERPNGAKVGRVVDVLI GRDAQPQAVVLDVGGLVDPDRRTIAANWSALRFAPKDKSLRALLDLNDAQLKASPPYAGDKPILAVSPAAGGAPAAAPAT ARAGAKR
Sequences:
>Translated_327_residues MMSGGFPRSAFRLPRPVAAAAPVVLATLALSGCALFRAPQASAPVVEAVAVPVEPASEPIAAPEPASAPEPAETAPPKKP HREAAPPRKPARVAPPAPAPAPAPAPLVTTRAIERSQVHALLDSEVRRGGKVIGRAVDMTADANGAPREMLVNLQGFMGV GDRKVSFPWKLFRFTPGGRHEPVILDMPATAQLQPADRPKAVPLTGSTQAGAEPGQMRIIDADVERPNGAKVGRVVDVLI GRDAQPQAVVLDVGGLVDPDRRTIAANWSALRFAPKDKSLRALLDLNDAQLKASPPYAGDKPILAVSPAAGGAPAAAPAT ARAGAKR >Mature_327_residues MMSGGFPRSAFRLPRPVAAAAPVVLATLALSGCALFRAPQASAPVVEAVAVPVEPASEPIAAPEPASAPEPAETAPPKKP HREAAPPRKPARVAPPAPAPAPAPAPLVTTRAIERSQVHALLDSEVRRGGKVIGRAVDMTADANGAPREMLVNLQGFMGV GDRKVSFPWKLFRFTPGGRHEPVILDMPATAQLQPADRPKAVPLTGSTQAGAEPGQMRIIDADVERPNGAKVGRVVDVLI GRDAQPQAVVLDVGGLVDPDRRTIAANWSALRFAPKDKSLRALLDLNDAQLKASPPYAGDKPILAVSPAAGGAPAAAPAT ARAGAKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33763; Mature: 33763
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSGGFPRSAFRLPRPVAAAAPVVLATLALSGCALFRAPQASAPVVEAVAVPVEPASEPI CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCCC AAPEPASAPEPAETAPPKKPHREAAPPRKPARVAPPAPAPAPAPAPLVTTRAIERSQVHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHH LLDSEVRRGGKVIGRAVDMTADANGAPREMLVNLQGFMGVGDRKVSFPWKLFRFTPGGRH HHHHHHHHCCCEEHEEEEECCCCCCCCHHHHEEHHHHCCCCCCEECCCEEEEEECCCCCC EPVILDMPATAQLQPADRPKAVPLTGSTQAGAEPGQMRIIDADVERPNGAKVGRVVDVLI CCEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH GRDAQPQAVVLDVGGLVDPDRRTIAANWSALRFAPKDKSLRALLDLNDAQLKASPPYAGD CCCCCCCEEEEECCCCCCCCCCEEEECCEEEEECCCCCCEEEEECCCCCEEEECCCCCCC KPILAVSPAAGGAPAAAPATARAGAKR CCEEEECCCCCCCCCCCCCHHHCCCCC >Mature Secondary Structure MMSGGFPRSAFRLPRPVAAAAPVVLATLALSGCALFRAPQASAPVVEAVAVPVEPASEPI CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCCC AAPEPASAPEPAETAPPKKPHREAAPPRKPARVAPPAPAPAPAPAPLVTTRAIERSQVHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHH LLDSEVRRGGKVIGRAVDMTADANGAPREMLVNLQGFMGVGDRKVSFPWKLFRFTPGGRH HHHHHHHHCCCEEHEEEEECCCCCCCCHHHHEEHHHHCCCCCCEECCCEEEEEECCCCCC EPVILDMPATAQLQPADRPKAVPLTGSTQAGAEPGQMRIIDADVERPNGAKVGRVVDVLI CCEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH GRDAQPQAVVLDVGGLVDPDRRTIAANWSALRFAPKDKSLRALLDLNDAQLKASPPYAGD CCCCCCCEEEEECCCCCCCCCCEEEECCEEEEECCCCCCEEEEECCCCCEEEECCCCCCC KPILAVSPAAGGAPAAAPATARAGAKR CCEEEECCCCCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA