Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is ydfG [H]

Identifier: 53718765

GI number: 53718765

Start: 1313442

End: 1313894

Strand: Reverse

Name: ydfG [H]

Synonym: BPSL1129

Alternate gene names: 53718765

Gene position: 1313894-1313442 (Counterclockwise)

Preceding gene: 53718766

Following gene: 53718764

Centisome position: 32.25

GC content: 64.02

Gene sequence:

>453_bases
ATGGCACACGCCCCCCGCCTTCCGTATCCGAAACTCGCATCGAAGCCGTTCAACGCGCTGCTCCATCTGTCCGAAACCGT
GTGGGGCGGCTCGCTCGGCAAGCCACTCGTCGATCTGGTGTTTCTGCGCGTCTCGCAGATCAACGGCTGCGCGTACTGCA
TCGACATGCACTGGCGCGATCTCGTGAAGCTCGGCGTCAACGAGCGGCATCTGAACGCGGTCGCCGGCTGGCGCGAGGCG
CCCTTCTTCGACGCCCGCGAGCGCGCCGCGCTGCAATGGGCGGAAAGCGTCGCGCGGATTCCGCACACGGACCCGAGCGA
CGAAGCGTTCGCGCAGTTGCAGGCGCATTTTTCCGACGCGGAAATCGCCGAGCTCGGCTTCGCGATCGCAACGATCAATG
CTTGGAATCTGCTGAACGTGAGCTTCAGGAATCCGATTCCGGAGACGGTGTAG

Upstream 100 bases:

>100_bases
ATCTCCCGCGCGCGCGGCGAGCTGTCACAAACGCGGGCCCCGCCGCGTCTTGTAGGCGAGAGGGCCGCATCGGGCGGCCC
GCCTTCAGAGGAAACCGACC

Downstream 100 bases:

>100_bases
ACGGACAGACCGAGCCGGCCCGGCACGCTCGGAGAATGGCGGCTGATGTCCCGACTCCCGGACGCTGAGCGCCGGGTTCC
TGGCGCCGAGCGCGGGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MAHAPRLPYPKLASKPFNALLHLSETVWGGSLGKPLVDLVFLRVSQINGCAYCIDMHWRDLVKLGVNERHLNAVAGWREA
PFFDARERAALQWAESVARIPHTDPSDEAFAQLQAHFSDAEIAELGFAIATINAWNLLNVSFRNPIPETV

Sequences:

>Translated_150_residues
MAHAPRLPYPKLASKPFNALLHLSETVWGGSLGKPLVDLVFLRVSQINGCAYCIDMHWRDLVKLGVNERHLNAVAGWREA
PFFDARERAALQWAESVARIPHTDPSDEAFAQLQAHFSDAEIAELGFAIATINAWNLLNVSFRNPIPETV
>Mature_149_residues
AHAPRLPYPKLASKPFNALLHLSETVWGGSLGKPLVDLVFLRVSQINGCAYCIDMHWRDLVKLGVNERHLNAVAGWREAP
FFDARERAALQWAESVARIPHTDPSDEAFAQLQAHFSDAEIAELGFAIATINAWNLLNVSFRNPIPETV

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 16727; Mature: 16596

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHAPRLPYPKLASKPFNALLHLSETVWGGSLGKPLVDLVFLRVSQINGCAYCIDMHWRD
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHH
LVKLGVNERHLNAVAGWREAPFFDARERAALQWAESVARIPHTDPSDEAFAQLQAHFSDA
HHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
EIAELGFAIATINAWNLLNVSFRNPIPETV
HHHHHHHHHEEECCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
AHAPRLPYPKLASKPFNALLHLSETVWGGSLGKPLVDLVFLRVSQINGCAYCIDMHWRD
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHH
LVKLGVNERHLNAVAGWREAPFFDARERAALQWAESVARIPHTDPSDEAFAQLQAHFSDA
HHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
EIAELGFAIATINAWNLLNVSFRNPIPETV
HHHHHHHHHEEECCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]