| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is yflK [H]
Identifier: 53718577
GI number: 53718577
Start: 1087055
End: 1087744
Strand: Reverse
Name: yflK [H]
Synonym: BPSL0935
Alternate gene names: 53718577
Gene position: 1087744-1087055 (Counterclockwise)
Preceding gene: 53718578
Following gene: 53718575
Centisome position: 26.7
GC content: 69.57
Gene sequence:
>690_bases ATGCATCCGACAACCGCGAAGCTCGATGCGCTGCTGACCGGTGCGATACGGCCGCTCGCGGGCACGGCACGCACGAGCGC GATCGACAAGCAGCCGGTGCGCGAGCGCTCATGGCTCGCCCGCACCGGCTTCGCCGGCGACGAGCAGGCCGATCGCAAGC ATCACGGCGGCCCGGACAAGGCGGTCCATCACTATGCGTTCGATCACTATCCGCAGTGGATCGCCGAGATCGGTCCGCGC GACGTGCTGGCCCGGCCCGGCGCATTCGGCGAGAACCTGTCGACGCGCGGCGTCACCGAACGCGACGTGTGCGTCGGCGA TGTCTTCACGCTCGGCGGCGCGACGCTGCAGGTGTCGCAATCCCGGCAGCCGTGCTGGAAGCTCAACGCACGCTTCGGAC TGCCGAAGATGTCCGCGCGCGTGCAGCAGAGCGGGCGAACCGGCTGGTACTACCGCGTGCTCGACGAAGGCTGGGTGGAG CCCGACGCCGAGCTCGCGTTGCGCGAGCGGCCGTATCCGCAATGGCCGCTGTCGAACGTGCTCGACGTGCTGTACCGTCG CACGCTCGACGTCGGCGCGCTCGAAGCGCTATCGCGCATCGACGCGCTGCCGCCGTCATGGCGCCAGTTGTTCGAGCGGC GGCTGAAGGCGGGCGCGGTCGAGGACTGGACGAAGCGGCTCGACGAATGA
Upstream 100 bases:
>100_bases GCAAGCCGCTGCGCCCGCTCGACGAAGCGCGCACGCGCGAGCTCGCCGCGATTCTCGACGCGCTGCGCGACACCGCGCAC GCGTGAACGGAGCGGCGCGC
Downstream 100 bases:
>100_bases CGTGAACGCGCATGGAGCGGCGAACGCCGGCCAATCGGCGGTGGATCGCCGCTCCCGTTGTCTGGATGTCTTGTTGTCTT GATGTCTTGACGCGTCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MHPTTAKLDALLTGAIRPLAGTARTSAIDKQPVRERSWLARTGFAGDEQADRKHHGGPDKAVHHYAFDHYPQWIAEIGPR DVLARPGAFGENLSTRGVTERDVCVGDVFTLGGATLQVSQSRQPCWKLNARFGLPKMSARVQQSGRTGWYYRVLDEGWVE PDAELALRERPYPQWPLSNVLDVLYRRTLDVGALEALSRIDALPPSWRQLFERRLKAGAVEDWTKRLDE
Sequences:
>Translated_229_residues MHPTTAKLDALLTGAIRPLAGTARTSAIDKQPVRERSWLARTGFAGDEQADRKHHGGPDKAVHHYAFDHYPQWIAEIGPR DVLARPGAFGENLSTRGVTERDVCVGDVFTLGGATLQVSQSRQPCWKLNARFGLPKMSARVQQSGRTGWYYRVLDEGWVE PDAELALRERPYPQWPLSNVLDVLYRRTLDVGALEALSRIDALPPSWRQLFERRLKAGAVEDWTKRLDE >Mature_229_residues MHPTTAKLDALLTGAIRPLAGTARTSAIDKQPVRERSWLARTGFAGDEQADRKHHGGPDKAVHHYAFDHYPQWIAEIGPR DVLARPGAFGENLSTRGVTERDVCVGDVFTLGGATLQVSQSRQPCWKLNARFGLPKMSARVQQSGRTGWYYRVLDEGWVE PDAELALRERPYPQWPLSNVLDVLYRRTLDVGALEALSRIDALPPSWRQLFERRLKAGAVEDWTKRLDE
Specific function: Unknown
COG id: COG2258
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MOSC domain [H]
Homologues:
Organism=Escherichia coli, GI87082350, Length=217, Percent_Identity=37.3271889400922, Blast_Score=137, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005163 - InterPro: IPR005302 - InterPro: IPR015808 - InterPro: IPR011037 [H]
Pfam domain/function: PF03475 3-alpha; PF03473 MOSC [H]
EC number: NA
Molecular weight: Translated: 25779; Mature: 25779
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPTTAKLDALLTGAIRPLAGTARTSAIDKQPVRERSWLARTGFAGDEQADRKHHGGPDK CCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHH AVHHYAFDHYPQWIAEIGPRDVLARPGAFGENLSTRGVTERDVCVGDVFTLGGATLQVSQ HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECC SRQPCWKLNARFGLPKMSARVQQSGRTGWYYRVLDEGWVEPDAELALRERPYPQWPLSNV CCCCHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHH LDVLYRRTLDVGALEALSRIDALPPSWRQLFERRLKAGAVEDWTKRLDE HHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MHPTTAKLDALLTGAIRPLAGTARTSAIDKQPVRERSWLARTGFAGDEQADRKHHGGPDK CCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHH AVHHYAFDHYPQWIAEIGPRDVLARPGAFGENLSTRGVTERDVCVGDVFTLGGATLQVSQ HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECC SRQPCWKLNARFGLPKMSARVQQSGRTGWYYRVLDEGWVEPDAELALRERPYPQWPLSNV CCCCHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHH LDVLYRRTLDVGALEALSRIDALPPSWRQLFERRLKAGAVEDWTKRLDE HHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]