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The map label for this gene is dapA [H]

Identifier: 53718578

GI number: 53718578

Start: 1087759

End: 1088655

Strand: Reverse

Name: dapA [H]

Synonym: BPSL0936

Alternate gene names: 53718578

Gene position: 1088655-1087759 (Counterclockwise)

Preceding gene: 53718579

Following gene: 53718577

Centisome position: 26.72

GC content: 70.35

Gene sequence:

>897_bases
ATGTCCAACCTCTTGCAAGGCATCATCGCCTACCCCGTCACGCCCTTCTCGCCGGACGGCCGGCTCGACACGGCCGCGCT
CGGCGCGCTCATCGAACGCCTGATCGCGAGCGGCGTGCACGGCATCGCGCCGCTCGGCAGCACCGGCGAAAGCGCCTATC
TGTCCGACGCCGAATGGGAAGCCGCCGCGTCGGCCTCGATTCGCGCGGTCGAGCGCCGCGTGCCGACCGTCGTCGGCATT
TCCGATCTCACCACCGCGAACGCGGTGCGCCGCGCGAAATTCGCCGAACAGGCGGGCGCGGACGCGGTCATGGTGCTGCC
CGTGTCGTACTGGCGGCTCGACGACGAAGCGATCGTCGGCCACTACCGCGCGATCGGCGACGCGATCGGCATTCCGATCA
TGCTGTACAACAACCCGGCGACGAGCGGCATCGACATGTCGCCCGAGCTGATCGCGCGCATCTTCCGCACGGTCGACAAC
GTGACGATGGTCAAGGAGAGCACGGGCGACATCAAGCGCATGCACCGGCTCGCGCAACTGGGCGACGGCGCGATCCCGTT
CTACAACGGCAGCAATCCGATGGCGCTCGCCGCGCTCGCGGCCGGCGCGGCCGGCTGGTGCACCGCCGCGCCGAACCTGA
ACGCGCGCCTGCCGCTCGCGTTATACGACGCGATGCGCGCAAGCGATCTCGACACGGCGCGCGCCGTCTTTCATCGACAG
TTGCCGCTGTTGCAGTTCATCGTCTCGGGCGGGCTGCCCGTCACGGTGAAGGCCGGGCTGCGGCTCGCGGGCTTCGACGC
GGGCGAGCCGCGCAAGCCGCTGCGCCCGCTCGACGAAGCGCGCACGCGCGAGCTCGCCGCGATTCTCGACGCGCTGCGCG
ACACCGCGCACGCGTGA

Upstream 100 bases:

>100_bases
CCCCGACTGCCTCGACTGATCCGCCGAATCGCCCACGCGTCGCACCGGCGGCGAGCCGACGACACCCGAAAACATCGAAC
ATTCCGGAGCACCCCGACTC

Downstream 100 bases:

>100_bases
ACGGAGCGGCGCGCATGCATCCGACAACCGCGAAGCTCGATGCGCTGCTGACCGGTGCGATACGGCCGCTCGCGGGCACG
GCACGCACGAGCGCGATCGA

Product: putative dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSNLLQGIIAYPVTPFSPDGRLDTAALGALIERLIASGVHGIAPLGSTGESAYLSDAEWEAAASASIRAVERRVPTVVGI
SDLTTANAVRRAKFAEQAGADAVMVLPVSYWRLDDEAIVGHYRAIGDAIGIPIMLYNNPATSGIDMSPELIARIFRTVDN
VTMVKESTGDIKRMHRLAQLGDGAIPFYNGSNPMALAALAAGAAGWCTAAPNLNARLPLALYDAMRASDLDTARAVFHRQ
LPLLQFIVSGGLPVTVKAGLRLAGFDAGEPRKPLRPLDEARTRELAAILDALRDTAHA

Sequences:

>Translated_298_residues
MSNLLQGIIAYPVTPFSPDGRLDTAALGALIERLIASGVHGIAPLGSTGESAYLSDAEWEAAASASIRAVERRVPTVVGI
SDLTTANAVRRAKFAEQAGADAVMVLPVSYWRLDDEAIVGHYRAIGDAIGIPIMLYNNPATSGIDMSPELIARIFRTVDN
VTMVKESTGDIKRMHRLAQLGDGAIPFYNGSNPMALAALAAGAAGWCTAAPNLNARLPLALYDAMRASDLDTARAVFHRQ
LPLLQFIVSGGLPVTVKAGLRLAGFDAGEPRKPLRPLDEARTRELAAILDALRDTAHA
>Mature_297_residues
SNLLQGIIAYPVTPFSPDGRLDTAALGALIERLIASGVHGIAPLGSTGESAYLSDAEWEAAASASIRAVERRVPTVVGIS
DLTTANAVRRAKFAEQAGADAVMVLPVSYWRLDDEAIVGHYRAIGDAIGIPIMLYNNPATSGIDMSPELIARIFRTVDNV
TMVKESTGDIKRMHRLAQLGDGAIPFYNGSNPMALAALAAGAAGWCTAAPNLNARLPLALYDAMRASDLDTARAVFHRQL
PLLQFIVSGGLPVTVKAGLRLAGFDAGEPRKPLRPLDEARTRELAAILDALRDTAHA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=281, Percent_Identity=25.6227758007117, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI13540533, Length=298, Percent_Identity=23.8255033557047, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1786463, Length=288, Percent_Identity=30.5555555555556, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI87082415, Length=242, Percent_Identity=28.9256198347107, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1788823, Length=278, Percent_Identity=26.6187050359712, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1789620, Length=294, Percent_Identity=27.5510204081633, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 31546; Mature: 31414

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLLQGIIAYPVTPFSPDGRLDTAALGALIERLIASGVHGIAPLGSTGESAYLSDAEWE
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
AAASASIRAVERRVPTVVGISDLTTANAVRRAKFAEQAGADAVMVLPVSYWRLDDEAIVG
HHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHEECCCHHHHH
HYRAIGDAIGIPIMLYNNPATSGIDMSPELIARIFRTVDNVTMVKESTGDIKRMHRLAQL
HHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH
GDGAIPFYNGSNPMALAALAAGAAGWCTAAPNLNARLPLALYDAMRASDLDTARAVFHRQ
CCCCCCEECCCCCHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH
LPLLQFIVSGGLPVTVKAGLRLAGFDAGEPRKPLRPLDEARTRELAAILDALRDTAHA
HHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNLLQGIIAYPVTPFSPDGRLDTAALGALIERLIASGVHGIAPLGSTGESAYLSDAEWE
CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
AAASASIRAVERRVPTVVGISDLTTANAVRRAKFAEQAGADAVMVLPVSYWRLDDEAIVG
HHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHEECCCHHHHH
HYRAIGDAIGIPIMLYNNPATSGIDMSPELIARIFRTVDNVTMVKESTGDIKRMHRLAQL
HHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH
GDGAIPFYNGSNPMALAALAAGAAGWCTAAPNLNARLPLALYDAMRASDLDTARAVFHRQ
CCCCCCEECCCCCHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH
LPLLQFIVSGGLPVTVKAGLRLAGFDAGEPRKPLRPLDEARTRELAAILDALRDTAHA
HHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA