| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is yieH [H]
Identifier: 53718322
GI number: 53718322
Start: 773388
End: 774074
Strand: Reverse
Name: yieH [H]
Synonym: BPSL0679
Alternate gene names: 53718322
Gene position: 774074-773388 (Counterclockwise)
Preceding gene: 53718323
Following gene: 53718318
Centisome position: 19.0
GC content: 68.41
Gene sequence:
>687_bases ATGCTCGACCACCTCATTTGCGACTGCGACGGCGTGCTCGTCGACAGCGAAGTGATCGCCGATCGCGTGCTGTTCGACAC GCTGTCGGCCACGTTCCCCGCCATCGATTTCACGGCCGACGCGAAAGCCGCGTTCGGCCAGCAGACCTCGCGCTTCCTCG CGGATCTCGAAGCGCGCCACGGCATCGCGATGCCGGCGAATTTCCTCGATACGATCGAGCACAACATCGAGCTCGGGCTC GCGCAATGGCTCGCGCCGATCGCGGGCGTGCGCGACGCGCTGACAAGAATCGCGTTGCCCGCGGCGGTCGTGTCGAACAG CCGGCTCGCGCGCGTGCGCAACTCGCTCAAGCGCGCAGCGCTCACCGACGTGTTCGGCGAGCGCGTGTTCAGCGCCGAGC AGGTCGCGCGGCCGAAGCCCTACCCCGATGTCTACCTGCATGCGGCGCGCACGCTCGGCGTCGAGCCGGCGCGCTGCGTG GTCGTCGAGGACAGCGTATCGGGGCTGAACGCCGCGCGCGCGGCCGGCATGAAGACGATCGCGTTCGTCGGCGCGAGCCA CATTCCCGGCGGCTATGAAGACGCGCTGCGCAAGATGGGCATCACGCGAATCATGCGTTCGATGGGCGAGTTGCCCGCGC TCGTCGAGGCGGGCATGCGCGGCGAATTCGGCAGCCAGCAGTCCTAG
Upstream 100 bases:
>100_bases TCATGGCGGCGCGTGTCGCCGCGCGCAGGCGCGGTCGCGCCCGCGGCGGGCAAAGCACGTATCATGGCGCTTCGTCGCCT CCCCCTTTTTTGTTGTCCTT
Downstream 100 bases:
>100_bases CCGGGCGAACTCCCCTCTCGTGCGCGGCTTGCGCGCCGCGCACGAGCCGCCGCCGGATCCGAACCGCTCAGGCGAGGTCC GCGCAGCATGCGTCGCGTGC
Product: putative hydrolase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MLDHLICDCDGVLVDSEVIADRVLFDTLSATFPAIDFTADAKAAFGQQTSRFLADLEARHGIAMPANFLDTIEHNIELGL AQWLAPIAGVRDALTRIALPAAVVSNSRLARVRNSLKRAALTDVFGERVFSAEQVARPKPYPDVYLHAARTLGVEPARCV VVEDSVSGLNAARAAGMKTIAFVGASHIPGGYEDALRKMGITRIMRSMGELPALVEAGMRGEFGSQQS
Sequences:
>Translated_228_residues MLDHLICDCDGVLVDSEVIADRVLFDTLSATFPAIDFTADAKAAFGQQTSRFLADLEARHGIAMPANFLDTIEHNIELGL AQWLAPIAGVRDALTRIALPAAVVSNSRLARVRNSLKRAALTDVFGERVFSAEQVARPKPYPDVYLHAARTLGVEPARCV VVEDSVSGLNAARAAGMKTIAFVGASHIPGGYEDALRKMGITRIMRSMGELPALVEAGMRGEFGSQQS >Mature_228_residues MLDHLICDCDGVLVDSEVIADRVLFDTLSATFPAIDFTADAKAAFGQQTSRFLADLEARHGIAMPANFLDTIEHNIELGL AQWLAPIAGVRDALTRIALPAAVVSNSRLARVRNSLKRAALTDVFGERVFSAEQVARPKPYPDVYLHAARTLGVEPARCV VVEDSVSGLNAARAAGMKTIAFVGASHIPGGYEDALRKMGITRIMRSMGELPALVEAGMRGEFGSQQS
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=188, Percent_Identity=29.2553191489362, Blast_Score=80, Evalue=8e-17, Organism=Escherichia coli, GI1788021, Length=181, Percent_Identity=32.0441988950276, Blast_Score=69, Evalue=3e-13, Organism=Drosophila melanogaster, GI20129151, Length=224, Percent_Identity=29.4642857142857, Blast_Score=74, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24449; Mature: 24449
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDHLICDCDGVLVDSEVIADRVLFDTLSATFPAIDFTADAKAAFGQQTSRFLADLEARH CCCCEEECCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GIAMPANFLDTIEHNIELGLAQWLAPIAGVRDALTRIALPAAVVSNSRLARVRNSLKRAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LTDVFGERVFSAEQVARPKPYPDVYLHAARTLGVEPARCVVVEDSVSGLNAARAAGMKTI HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCHHHH AFVGASHIPGGYEDALRKMGITRIMRSMGELPALVEAGMRGEFGSQQS HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLDHLICDCDGVLVDSEVIADRVLFDTLSATFPAIDFTADAKAAFGQQTSRFLADLEARH CCCCEEECCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GIAMPANFLDTIEHNIELGLAQWLAPIAGVRDALTRIALPAAVVSNSRLARVRNSLKRAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LTDVFGERVFSAEQVARPKPYPDVYLHAARTLGVEPARCVVVEDSVSGLNAARAAGMKTI HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCHHHH AFVGASHIPGGYEDALRKMGITRIMRSMGELPALVEAGMRGEFGSQQS HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]