| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718323
Identifier: 53718323
GI number: 53718323
Start: 774204
End: 775058
Strand: Reverse
Name: 53718323
Synonym: BPSL0680
Alternate gene names: NA
Gene position: 775058-774204 (Counterclockwise)
Preceding gene: 53718324
Following gene: 53718322
Centisome position: 19.02
GC content: 68.3
Gene sequence:
>855_bases ATGGGCTTGCTGTCCGCACTCTGCTGGGGCAGCACCGATTTTCTCGCGGGACACGCGGCGCGCCGCGTCGGCGTCACCAA ATCGCTGTTCTACAGCCAGTCGTTCGGCTTCCTGATTCTCACCGCGTCGCTCGCGCTGCATCCGTCGTCGCTGCGCATCA CGGCGATCGACATGGGTTTCGCCGTCGGCATTCTCGCCGCCGTGTGCAACCTGATCGCGATGGCCGCGCTGCTCAGGGCG CTCGCGATCGGCAAGGCGTCGGTCGTCGCGCCGATCGTGTCGCTGTACGGCGCGGTGACGACGATCCTCTCGCTCGCGAC CGGCCAGTCGATCACGCGGCTCGCGATCGCGGGCCTCGTGCTTTGCATCGTCGGCGCGAGCCTCGCGAGCATCTCGAAAG CGGCGGACGGCAGGACGGAATCGCCCGCGTCGATCGGCTTCGCGCTGCTGTCGGCCGCGATGTTCGGGCTCGGCTTCTGG CTGCAGGGTGCGTTCGCGGTCAAGAGCCTGGGCGTCGTCAGCGCGCTGTGGATCTATTACCTGACGGCCGTCGTGATCCT GTTCGCGACGCTCGCCCGCGCGCGCAACCTGTCCGCGCCGCCCGGCTCGATCGTGCTGCTGATCCTGTCGATCAGCGTGT TCAGCCTCGTCGGTTTCTTCTCGCTCGCGTACGGCTCGACGACGGGGCATGTCGCGATCGTCACCGTGCTGAGCTCGCTC GCGAGCGGCGTGACGGCGCTGCTCGGCTTCTTCGTGCGCGGCGAACGGCCGAGCGCGCTGCAATGGGCGGGCATCGCGAC GATCATCGTCGGCGTGGTGATGCTGAAGATCACGCCGCAGGCGCTCGCCGCGTAG
Upstream 100 bases:
>100_bases GAGCTCGGCTGAGCCGCGCGGCGCGCCGGCGCCGATGCGGCCGCCGACACAACGATAGACAGACACGATCAACGGACGAG GGAACGACATGGCGATTCTG
Downstream 100 bases:
>100_bases CGGCGGCGGGCACGCTTCACGCGCGCCGTTCATGGCGGCGCGTGTCGCCGCGCGCAGGCGCGGTCGCGCCCGCGGCGGGC AAAGCACGTATCATGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MGLLSALCWGSTDFLAGHAARRVGVTKSLFYSQSFGFLILTASLALHPSSLRITAIDMGFAVGILAAVCNLIAMAALLRA LAIGKASVVAPIVSLYGAVTTILSLATGQSITRLAIAGLVLCIVGASLASISKAADGRTESPASIGFALLSAAMFGLGFW LQGAFAVKSLGVVSALWIYYLTAVVILFATLARARNLSAPPGSIVLLILSISVFSLVGFFSLAYGSTTGHVAIVTVLSSL ASGVTALLGFFVRGERPSALQWAGIATIIVGVVMLKITPQALAA
Sequences:
>Translated_284_residues MGLLSALCWGSTDFLAGHAARRVGVTKSLFYSQSFGFLILTASLALHPSSLRITAIDMGFAVGILAAVCNLIAMAALLRA LAIGKASVVAPIVSLYGAVTTILSLATGQSITRLAIAGLVLCIVGASLASISKAADGRTESPASIGFALLSAAMFGLGFW LQGAFAVKSLGVVSALWIYYLTAVVILFATLARARNLSAPPGSIVLLILSISVFSLVGFFSLAYGSTTGHVAIVTVLSSL ASGVTALLGFFVRGERPSALQWAGIATIIVGVVMLKITPQALAA >Mature_283_residues GLLSALCWGSTDFLAGHAARRVGVTKSLFYSQSFGFLILTASLALHPSSLRITAIDMGFAVGILAAVCNLIAMAALLRAL AIGKASVVAPIVSLYGAVTTILSLATGQSITRLAIAGLVLCIVGASLASISKAADGRTESPASIGFALLSAAMFGLGFWL QGAFAVKSLGVVSALWIYYLTAVVILFATLARARNLSAPPGSIVLLILSISVFSLVGFFSLAYGSTTGHVAIVTVLSSLA SGVTALLGFFVRGERPSALQWAGIATIIVGVVMLKITPQALAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28977; Mature: 28846
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLSALCWGSTDFLAGHAARRVGVTKSLFYSQSFGFLILTASLALHPSSLRITAIDMGF CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEHHHH AVGILAAVCNLIAMAALLRALAIGKASVVAPIVSLYGAVTTILSLATGQSITRLAIAGLV HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LCIVGASLASISKAADGRTESPASIGFALLSAAMFGLGFWLQGAFAVKSLGVVSALWIYY HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAVVILFATLARARNLSAPPGSIVLLILSISVFSLVGFFSLAYGSTTGHVAIVTVLSSL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ASGVTALLGFFVRGERPSALQWAGIATIIVGVVMLKITPQALAA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure GLLSALCWGSTDFLAGHAARRVGVTKSLFYSQSFGFLILTASLALHPSSLRITAIDMGF CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEHHHH AVGILAAVCNLIAMAALLRALAIGKASVVAPIVSLYGAVTTILSLATGQSITRLAIAGLV HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LCIVGASLASISKAADGRTESPASIGFALLSAAMFGLGFWLQGAFAVKSLGVVSALWIYY HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAVVILFATLARARNLSAPPGSIVLLILSISVFSLVGFFSLAYGSTTGHVAIVTVLSSL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ASGVTALLGFFVRGERPSALQWAGIATIIVGVVMLKITPQALAA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA