| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53718247
Identifier: 53718247
GI number: 53718247
Start: 680568
End: 681764
Strand: Reverse
Name: 53718247
Synonym: BPSL0604
Alternate gene names: NA
Gene position: 681764-680568 (Counterclockwise)
Preceding gene: 53718248
Following gene: 53718246
Centisome position: 16.73
GC content: 70.93
Gene sequence:
>1197_bases ATGAAAGTACTCGTCATCAACGATTTCGCCCGCAAGGGCGGCGCCGAAGAGGTCTACCGCACATCGGTCGACGTCCTGCG CGCGCAGCCGGGCGTCGAAGTCGCGACGTTCGACGAGCGCGCGTTCGCGCTCACGCAAGGCGGCGCGGCGCGCGCGTGGA ACGCGCCCGCGGCGCGCGCGCTCGCGGCCGTGCTCGAACGCGAGGCGCCGCAGCGCGTGCTCGTGCACAACTATCACAAC CTGCTGTCGCCTTCCGTCGTGCCGGTGATCGCGCGCTACAAGCGGCGCACCGGCTGCCGCGCGTACCTCACGTGCCACGA CTACCATCTCGTCTTCTACAACCCGAACCTGCTGACCTATCCGCGCGGCCGCGCGACGCCGCTGCCGCTCGACGCGCTCG CGCGCGGCGCGCGGCTCTTCGAGCGCTCGAGCCCGCGCGGCGCGCTGCACGACGCGATCAAGAAGCTGCACTGGCATGCG ATCGACGCGCTCGTGCAGCCCGCCGACGCATTCGATCTGCTGCTCTGCCCGAGCCCGTACATGCGCGACGCGCTCGCGCG GCGCGGCATCGCGCGCACCGCGCTGCTGCACAATCCGGTCAGCACCGCGCTCACGCCGCGCGAGCCGAAATGCGCGGAGC GCGAGCGGCTCGATCTCGCATTCGTCGGCCGCATCGATCCGGAAAAGGGGCTCGACGAATTTCTCGAGCTCGCGCGCGCG TCGCGCTTCGAGCGCATCGCGAGCGTGACCGTCTACGGCGACGGCGGCCAGCGCGCGCTGCTCGAGCGCAAGTACGCGGC GCTGATCGCCGCGGGCCAGTTGCGCTTCGCCGGCCGCCTCGATCACGCGCGGCTGTTCGTCGCGCTGCGCGAGCACGACG CGCTCGTGCTGCCTTCGGTATGGGCGGAGAACGCGCCGCTCGTGATCGTCGAGGCGGCGATGATCGGGCTGCCCGTGCTC GTTCACGACATCGGCAGCCTGTCGAGCTTCGGCGACGAGATCGGCAACAAGATCCGCTACGCGCGCAACGGCGCGAGCCT CGCGCATGCGCTCGACGCGCTGCGTGCGCATCTGCGCGAGCCGCGGCGCCGTTACGACTGGTCGCTCTACACGCGGCGGC ATTACGCCGACCGCCTGGCCGCGCTGCTCGAACTGAGCGCACGAGAAGCCCGGGAACTCGCGCCACAATGCGATTGA
Upstream 100 bases:
>100_bases GCGAAGCCGGCCGACGCCGAGCGCGCGCCCGCCGCCGGGCCCGCGCGGGCGCTCGGCGCGCAATGAAGAAGCGCGGGCGG ATCCGCCCGCGCCGTTTCGC
Downstream 100 bases:
>100_bases CCGATCCGGCTCACCTCGCCGCGCGCGCCATGAGCGCGCGCGGCACGACGTCGCCCATGCGACGCGAAGGCCACGCATGA CGACCGTTCGCAAGAATTTC
Product: putative glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase; Glycosyltransferase Protein; Glycosyl Transferase Group 1 Family Protein
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKVLVINDFARKGGAEEVYRTSVDVLRAQPGVEVATFDERAFALTQGGAARAWNAPAARALAAVLEREAPQRVLVHNYHN LLSPSVVPVIARYKRRTGCRAYLTCHDYHLVFYNPNLLTYPRGRATPLPLDALARGARLFERSSPRGALHDAIKKLHWHA IDALVQPADAFDLLLCPSPYMRDALARRGIARTALLHNPVSTALTPREPKCAERERLDLAFVGRIDPEKGLDEFLELARA SRFERIASVTVYGDGGQRALLERKYAALIAAGQLRFAGRLDHARLFVALREHDALVLPSVWAENAPLVIVEAAMIGLPVL VHDIGSLSSFGDEIGNKIRYARNGASLAHALDALRAHLREPRRRYDWSLYTRRHYADRLAALLELSAREARELAPQCD
Sequences:
>Translated_398_residues MKVLVINDFARKGGAEEVYRTSVDVLRAQPGVEVATFDERAFALTQGGAARAWNAPAARALAAVLEREAPQRVLVHNYHN LLSPSVVPVIARYKRRTGCRAYLTCHDYHLVFYNPNLLTYPRGRATPLPLDALARGARLFERSSPRGALHDAIKKLHWHA IDALVQPADAFDLLLCPSPYMRDALARRGIARTALLHNPVSTALTPREPKCAERERLDLAFVGRIDPEKGLDEFLELARA SRFERIASVTVYGDGGQRALLERKYAALIAAGQLRFAGRLDHARLFVALREHDALVLPSVWAENAPLVIVEAAMIGLPVL VHDIGSLSSFGDEIGNKIRYARNGASLAHALDALRAHLREPRRRYDWSLYTRRHYADRLAALLELSAREARELAPQCD >Mature_398_residues MKVLVINDFARKGGAEEVYRTSVDVLRAQPGVEVATFDERAFALTQGGAARAWNAPAARALAAVLEREAPQRVLVHNYHN LLSPSVVPVIARYKRRTGCRAYLTCHDYHLVFYNPNLLTYPRGRATPLPLDALARGARLFERSSPRGALHDAIKKLHWHA IDALVQPADAFDLLLCPSPYMRDALARRGIARTALLHNPVSTALTPREPKCAERERLDLAFVGRIDPEKGLDEFLELARA SRFERIASVTVYGDGGQRALLERKYAALIAAGQLRFAGRLDHARLFVALREHDALVLPSVWAENAPLVIVEAAMIGLPVL VHDIGSLSSFGDEIGNKIRYARNGASLAHALDALRAHLREPRRRYDWSLYTRRHYADRLAALLELSAREARELAPQCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44312; Mature: 44312
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLVINDFARKGGAEEVYRTSVDVLRAQPGVEVATFDERAFALTQGGAARAWNAPAARA CEEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCHHHHH LAAVLEREAPQRVLVHNYHNLLSPSVVPVIARYKRRTGCRAYLTCHDYHLVFYNPNLLTY HHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEEEC PRGRATPLPLDALARGARLFERSSPRGALHDAIKKLHWHAIDALVQPADAFDLLLCPSPY CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH MRDALARRGIARTALLHNPVSTALTPREPKCAERERLDLAFVGRIDPEKGLDEFLELARA HHHHHHHCCHHHHHHHCCCHHHCCCCCCCCCHHHHCCCEEEEECCCCCCCHHHHHHHHHH SRFERIASVTVYGDGGQRALLERKYAALIAAGQLRFAGRLDHARLFVALREHDALVLPSV HHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCEEECHH WAENAPLVIVEAAMIGLPVLVHDIGSLSSFGDEIGNKIRYARNGASLAHALDALRAHLRE HCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC PRRRYDWSLYTRRHYADRLAALLELSAREARELAPQCD HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKVLVINDFARKGGAEEVYRTSVDVLRAQPGVEVATFDERAFALTQGGAARAWNAPAARA CEEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCHHHHH LAAVLEREAPQRVLVHNYHNLLSPSVVPVIARYKRRTGCRAYLTCHDYHLVFYNPNLLTY HHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEEEC PRGRATPLPLDALARGARLFERSSPRGALHDAIKKLHWHAIDALVQPADAFDLLLCPSPY CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH MRDALARRGIARTALLHNPVSTALTPREPKCAERERLDLAFVGRIDPEKGLDEFLELARA HHHHHHHCCHHHHHHHCCCHHHCCCCCCCCCHHHHCCCEEEEECCCCCCCHHHHHHHHHH SRFERIASVTVYGDGGQRALLERKYAALIAAGQLRFAGRLDHARLFVALREHDALVLPSV HHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCEEECHH WAENAPLVIVEAAMIGLPVLVHDIGSLSSFGDEIGNKIRYARNGASLAHALDALRAHLRE HCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC PRRRYDWSLYTRRHYADRLAALLELSAREARELAPQCD HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA