| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is manC [H]
Identifier: 53718248
GI number: 53718248
Start: 681799
End: 683391
Strand: Reverse
Name: manC [H]
Synonym: BPSL0605
Alternate gene names: 53718248
Gene position: 683391-681799 (Counterclockwise)
Preceding gene: 53718249
Following gene: 53718247
Centisome position: 16.77
GC content: 71.0
Gene sequence:
>1593_bases ATGACCGATCTCGCCACGAAGCCCACTCCCGCCGCGTCGCACGGCACCCTGCCGCGCATCCTGCCCGTGATTCTCGCGGG CGGCTCCGGCACGCGCCTCTGGCCGCTGTCGCGCGAGCATCATCCGAAACAGCTGATCGATCTGATCGCCGACGAATCGC CGCTGTCCGCCACCGCGCGCCGCCTCACGGGCATCGCGAACGCCGAGCTCGCCGATGCGCTGCTGCTCGTCTGCGGCGAG CAGCATCGCTTCACGAGCGCCGCGCAAGTCAGCGCACGCGGCCTCGATGCGCGCATCCTGCTCGAGCCGGCCGCGCGCAA CACGGCCCCCGCGCTCACGCTCGCCGCGCTCGAAGCGCTCGCGCATCACGGCGACCCCGTGCTCGCCGCGATGCCCGCCG ATCACGCGGTGTCCGATACGCGCGCGTTCCAGGAAACGATCGCGCTGGCCGCGCGCTACGCGCAGGACGGCGCGATCGTC ACGCTCGGCGTGCTGCCGCGCCGCGCGGAAACGGGCTACGGCTACATCAAGGTCGGCGCGCCGCTCGCCGGCGCGAACGG CGACACGGGCGGCTACGCGATCGACAGCTTCGTCGAGAAGCCGCATCAGGAGCTCGCGCAGCAGTACCTGCAATCCGGCG ACTACTGGTGGAACAGCGGCATCTTCGTCGTGCGCGCGTCGACGTGGCTCGCGGCGATCCGCGCGCTGCAGCCGGACATG CACGCGGCCTGCGAAGCGGCGTGGCGCGGCGGCACGAGCGAAGGCGCGTTCTTCAAGGCGGATGCGGCGGCGTTCGCCGC GTGCCCGTCCGATTCGATCGACTATGCGGTGATGGAGCGCCTGACGGGCGCGCGCGCGCTCGGCATCCCGGGCGTGATCG TGCCGCTCACGGCCGGCTGGTCCGACGTCGGTTCGTGGGACGCGATCTGGGAACTGCTGCCGAAGGACGAAGCGGGCAAC GTCGCGCGCGGCGAGGTGCTGTTCGAAGGCACCGAGGACAGCTTCGCGCGCTCCGAGGGCCGGCTCGTCGCATGCGTCGG GCTCAAGGACGTGGTGGTCGTCGAGACGCCCGACGCGGTGCTCGTCGCGAACAAGCACCGCGTGCAGGACGTGAAGACCG TCGTCGCGCGCCTGAAGTCCGGCCGGCATGAGCAGGTGCGCGACCACCGCAAGGTGCAGCGCCCGTGGGGCTACTACGAT TCGATCGATCGCGGCGAGCGCTTCCAGGTGAAGCGGATCGTCGTCGATCCGGGCAAGCAGCTGTCGCTGCAGATGCACTA TCACCGCGCCGAGCACTGGATCGTCGTGCGCGGCACCGCCAAGGTCACGCGCGGCGACGAGACGTTCCTGCTGAGCGAGA ACGAATCGACGTACATCGCCGTCGGCGCGGTTCACCGTCTGGAGAACCCGGGCAGGATTCCGCTCGAGATCATCGAGGTT CAATCGGGCGACTATCTCGGCGAAGACGACATCGTTCGCTTCGACGACCGTTACGGCCGCGCGAGCACGCAGCACGCGCC CGACGCGGCGAAGCCGGCCGACGCCGAGCGCGCGCCCGCCGCCGGGCCCGCGCGGGCGCTCGGCGCGCAATGA
Upstream 100 bases:
>100_bases GCGCCGCGCGCAAACCGCGCAAGGCCAACGCCGAATCCACCACCGAAGGCGAACGCTATGCGTTCGCCGGCCGTTTGCCG GCCGACTCCGGAATGAACCG
Downstream 100 bases:
>100_bases AGAAGCGCGGGCGGATCCGCCCGCGCCGTTTCGCATGAAAGTACTCGTCATCAACGATTTCGCCCGCAAGGGCGGCGCCG AAGAGGTCTACCGCACATCG
Product: putative mannose-1-phosphate guanylyltransferase
Products: NA
Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyl transferase; GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MTDLATKPTPAASHGTLPRILPVILAGGSGTRLWPLSREHHPKQLIDLIADESPLSATARRLTGIANAELADALLLVCGE QHRFTSAAQVSARGLDARILLEPAARNTAPALTLAALEALAHHGDPVLAAMPADHAVSDTRAFQETIALAARYAQDGAIV TLGVLPRRAETGYGYIKVGAPLAGANGDTGGYAIDSFVEKPHQELAQQYLQSGDYWWNSGIFVVRASTWLAAIRALQPDM HAACEAAWRGGTSEGAFFKADAAAFAACPSDSIDYAVMERLTGARALGIPGVIVPLTAGWSDVGSWDAIWELLPKDEAGN VARGEVLFEGTEDSFARSEGRLVACVGLKDVVVVETPDAVLVANKHRVQDVKTVVARLKSGRHEQVRDHRKVQRPWGYYD SIDRGERFQVKRIVVDPGKQLSLQMHYHRAEHWIVVRGTAKVTRGDETFLLSENESTYIAVGAVHRLENPGRIPLEIIEV QSGDYLGEDDIVRFDDRYGRASTQHAPDAAKPADAERAPAAGPARALGAQ
Sequences:
>Translated_530_residues MTDLATKPTPAASHGTLPRILPVILAGGSGTRLWPLSREHHPKQLIDLIADESPLSATARRLTGIANAELADALLLVCGE QHRFTSAAQVSARGLDARILLEPAARNTAPALTLAALEALAHHGDPVLAAMPADHAVSDTRAFQETIALAARYAQDGAIV TLGVLPRRAETGYGYIKVGAPLAGANGDTGGYAIDSFVEKPHQELAQQYLQSGDYWWNSGIFVVRASTWLAAIRALQPDM HAACEAAWRGGTSEGAFFKADAAAFAACPSDSIDYAVMERLTGARALGIPGVIVPLTAGWSDVGSWDAIWELLPKDEAGN VARGEVLFEGTEDSFARSEGRLVACVGLKDVVVVETPDAVLVANKHRVQDVKTVVARLKSGRHEQVRDHRKVQRPWGYYD SIDRGERFQVKRIVVDPGKQLSLQMHYHRAEHWIVVRGTAKVTRGDETFLLSENESTYIAVGAVHRLENPGRIPLEIIEV QSGDYLGEDDIVRFDDRYGRASTQHAPDAAKPADAERAPAAGPARALGAQ >Mature_529_residues TDLATKPTPAASHGTLPRILPVILAGGSGTRLWPLSREHHPKQLIDLIADESPLSATARRLTGIANAELADALLLVCGEQ HRFTSAAQVSARGLDARILLEPAARNTAPALTLAALEALAHHGDPVLAAMPADHAVSDTRAFQETIALAARYAQDGAIVT LGVLPRRAETGYGYIKVGAPLAGANGDTGGYAIDSFVEKPHQELAQQYLQSGDYWWNSGIFVVRASTWLAAIRALQPDMH AACEAAWRGGTSEGAFFKADAAAFAACPSDSIDYAVMERLTGARALGIPGVIVPLTAGWSDVGSWDAIWELLPKDEAGNV ARGEVLFEGTEDSFARSEGRLVACVGLKDVVVVETPDAVLVANKHRVQDVKTVVARLKSGRHEQVRDHRKVQRPWGYYDS IDRGERFQVKRIVVDPGKQLSLQMHYHRAEHWIVVRGTAKVTRGDETFLLSENESTYIAVGAVHRLENPGRIPLEIIEVQ SGDYLGEDDIVRFDDRYGRASTQHAPDAAKPADAERAPAAGPARALGAQ
Specific function: Involved in xanthan production [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=486, Percent_Identity=51.0288065843621, Blast_Score=468, Evalue=1e-133,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =5.3.1.8; =2.7.7.13 [H]
Molecular weight: Translated: 57037; Mature: 56906
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLATKPTPAASHGTLPRILPVILAGGSGTRLWPLSREHHPKQLIDLIADESPLSATAR CCCCCCCCCCCCCCCCHHHHHHHEEECCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHHH RLTGIANAELADALLLVCGEQHRFTSAAQVSARGLDARILLEPAARNTAPALTLAALEAL HHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHH AHHGDPVLAAMPADHAVSDTRAFQETIALAARYAQDGAIVTLGVLPRRAETGYGYIKVGA HHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECC PLAGANGDTGGYAIDSFVEKPHQELAQQYLQSGDYWWNSGIFVVRASTWLAAIRALQPDM EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEHHHHHHHHHHHCCHH HAACEAAWRGGTSEGAFFKADAAAFAACPSDSIDYAVMERLTGARALGIPGVIVPLTAGW HHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCC SDVGSWDAIWELLPKDEAGNVARGEVLFEGTEDSFARSEGRLVACVGLKDVVVVETPDAV CCCCCHHHHHHHCCCCCCCCEEECCEEEECCCHHHHHCCCCEEEEECCCEEEEEECCCEE LVANKHRVQDVKTVVARLKSGRHEQVRDHRKVQRPWGYYDSIDRGERFQVKRIVVDPGKQ EEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCC LSLQMHYHRAEHWIVVRGTAKVTRGDETFLLSENESTYIAVGAVHRLENPGRIPLEIIEV EEEEEEEECCCEEEEEECCEEEECCCCEEEEECCCCCEEEEEEHHHCCCCCCCCEEEEEE QSGDYLGEDDIVRFDDRYGRASTQHAPDAAKPADAERAPAAGPARALGAQ CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC >Mature Secondary Structure TDLATKPTPAASHGTLPRILPVILAGGSGTRLWPLSREHHPKQLIDLIADESPLSATAR CCCCCCCCCCCCCCCHHHHHHHEEECCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHHH RLTGIANAELADALLLVCGEQHRFTSAAQVSARGLDARILLEPAARNTAPALTLAALEAL HHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHH AHHGDPVLAAMPADHAVSDTRAFQETIALAARYAQDGAIVTLGVLPRRAETGYGYIKVGA HHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECC PLAGANGDTGGYAIDSFVEKPHQELAQQYLQSGDYWWNSGIFVVRASTWLAAIRALQPDM EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEHHHHHHHHHHHCCHH HAACEAAWRGGTSEGAFFKADAAAFAACPSDSIDYAVMERLTGARALGIPGVIVPLTAGW HHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCC SDVGSWDAIWELLPKDEAGNVARGEVLFEGTEDSFARSEGRLVACVGLKDVVVVETPDAV CCCCCHHHHHHHCCCCCCCCEEECCEEEECCCHHHHHCCCCEEEEECCCEEEEEECCCEE LVANKHRVQDVKTVVARLKSGRHEQVRDHRKVQRPWGYYDSIDRGERFQVKRIVVDPGKQ EEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCC LSLQMHYHRAEHWIVVRGTAKVTRGDETFLLSENESTYIAVGAVHRLENPGRIPLEIIEV EEEEEEEECCCEEEEEECCEEEECCCCEEEEECCCCCEEEEEEHHHCCCCCCCCEEEEEE QSGDYLGEDDIVRFDDRYGRASTQHAPDAAKPADAERAPAAGPARALGAQ CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1370280; 11589581 [H]