| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53718216
Identifier: 53718216
GI number: 53718216
Start: 633550
End: 633945
Strand: Reverse
Name: 53718216
Synonym: BPSL0574B
Alternate gene names: NA
Gene position: 633945-633550 (Counterclockwise)
Preceding gene: 53718217
Following gene: 53718212
Centisome position: 15.56
GC content: 55.56
Gene sequence:
>396_bases ATGGGGCCTCGCGACACCGAACGCGTAATGAAGGAGCTTCTTGCTTTCGAGCAAGGAAAGCGAGCTACCATCACGTTGAC TTGGAAACATCTCGCTCGGGTAGCCGGCTTTACCGACCGGTCTTTGCGTTCGAAGCCCAAGCTTCGCGCACGGTTCGATG AGGTAAGAGATGCCCTGCTGGGGAAGGGACGTATTCGCCGCTCCACCGGCATGGTTCACGAAGACCTTCAGAAAGCGAAT TCTCGGCTTCGACAACAGCTCAAGATGTACGAGAAACTCGAAAACGAATGGCTTGAAAGATGGATTCGCATCGCCGCGTC ACTCAAAGCACACGGGATGAGCATCGACCAGTTCGATGTCGACCTTGAGCTGAGGAGTGAGCGGCGCTCAGGCTGA
Upstream 100 bases:
>100_bases CAAAACTTCGTGAACCAAATCCTGAAATCTATGGAGGAGAGCAAGGTTGGTGAACCGAACAAAACCTAAGAAGGGTGCAA GAGCTAGAGCCGTACCCAAG
Downstream 100 bases:
>100_bases TTCTCGCGCACATCAAGACAGGACGCAAAAAGCATGGGGGGGCAAAGCATCACGCAGCGGCAAGCGATGTAATTCCATCG ATGACCGTTTAGCGGAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MGPRDTERVMKELLAFEQGKRATITLTWKHLARVAGFTDRSLRSKPKLRARFDEVRDALLGKGRIRRSTGMVHEDLQKAN SRLRQQLKMYEKLENEWLERWIRIAASLKAHGMSIDQFDVDLELRSERRSG
Sequences:
>Translated_131_residues MGPRDTERVMKELLAFEQGKRATITLTWKHLARVAGFTDRSLRSKPKLRARFDEVRDALLGKGRIRRSTGMVHEDLQKAN SRLRQQLKMYEKLENEWLERWIRIAASLKAHGMSIDQFDVDLELRSERRSG >Mature_130_residues GPRDTERVMKELLAFEQGKRATITLTWKHLARVAGFTDRSLRSKPKLRARFDEVRDALLGKGRIRRSTGMVHEDLQKANS RLRQQLKMYEKLENEWLERWIRIAASLKAHGMSIDQFDVDLELRSERRSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15392; Mature: 15261
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPRDTERVMKELLAFEQGKRATITLTWKHLARVAGFTDRSLRSKPKLRARFDEVRDALL CCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHH GKGRIRRSTGMVHEDLQKANSRLRQQLKMYEKLENEWLERWIRIAASLKAHGMSIDQFDV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC DLELRSERRSG HHHHHHCCCCC >Mature Secondary Structure GPRDTERVMKELLAFEQGKRATITLTWKHLARVAGFTDRSLRSKPKLRARFDEVRDALL CCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHH GKGRIRRSTGMVHEDLQKANSRLRQQLKMYEKLENEWLERWIRIAASLKAHGMSIDQFDV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC DLELRSERRSG HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA