| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718217
Identifier: 53718217
GI number: 53718217
Start: 633977
End: 635932
Strand: Reverse
Name: 53718217
Synonym: BPSL0575
Alternate gene names: NA
Gene position: 635932-633977 (Counterclockwise)
Preceding gene: 53718218
Following gene: 53718216
Centisome position: 15.61
GC content: 56.34
Gene sequence:
>1956_bases GTGGCTCTAGCAGCCCTCCAACACGTGGCTACCGTGCGACCGGTAGCGAGCGTCGTACGAATCGACCCGCGAACAGACAG CTGCATTGTGGCTCGACGTTCGCTGATTGAGTTGTATAAGACCTCACAGCCGTTTGGCGAAATCAACTGGCTCTCGAGTT GCTGGGACATAACCGACGCTTTGCGAGACAAAATTAAGGGATACACGGCGCGAAAGCGTGCACTCGTTCACTTTACCCGT CACCGTGAAGTCGGGCAGCGCATAGGACTGCCATTTCCCGAGGAGGACGACCTCGCCAGCGTAATCAAAGCATTCGCGTG CCGCCAACATGTCCTCAATGGCGTGACCGCCGCGAGGCATATGGTCTACATCCGCGCGTGGCGGTACATAGTTGGCGCAA TGCGCGGGACTGACATCGCACAGGTCACCCCCGCAACATTCAATTCCGCCGCACTAGCCGCAACTAGGGAAAAGTCATCG AGCGCATATACGGTCCACGGTGCCCTTGAGGCAATTGCGGATATGCTCGACGAACTGCGCCTTACCAAAGTACCACTCCG CTGGAGGTGGGTGAAGAAAAAGCGGGGAAAGGGGTACGGTGGAAGTAAGCAGATACGACTGGGACAAGCACCTGACACCG ACCGGCGCGCATCCGATGACGTCGTCTACGCTGTCGCGCAGTTGTATCGCATCGTTCCTAAGACCAAGTGGGCAGACCGA ATCTGTGTGCTGCTGGCGACGATTCTCGTCTGTACGGGTCTCCGCCTCGGGCAAGTGCTCTGCTTGAGAGCTGAAATGCC CGCTTTCGATGAGGCAACCGGTGAGCACTTCATTCGGCTCGTCGCATTTAAGCGAACGGACGCGACGCGAAAAACGCTGC TCTCCGAAACCGTAGGCCTTCTGAATGATGTCTTCCGGGAGCTGTTGGAAATTACAGAGCCGGTTCGTGAGGTCGCTCGT TGGCTCGATAAAAACCCGGGGAGAGTCAACCTGCCCAAGCCGGATAACTCCGACGGAACTGTGACGGCTGCGAGATTGCG AACCTGGTTCGGACTCTCCACTGGCGCCTTTAAGCGTCGTCTCCAGACATGGGGCTTCGCAGGAGCCGCGATACCGCTGC ACGAACTCAACGAACGCCTACTTCGGGATAGATTCGACAAGCCAGTTGTTCCCGGCACGAGAGGCGAACAACTGCTGCTC AAAGACTGCCTTTCAATATCATTCGTTTCGGCAATGAAGCAAACGACGGCTGCCCTGAAACATGCTGTTCGCCCCATCGG CGAGCAACACGTGTCGGACCGGTTACGCGGTCGTCAGTTGGGAGACGGCCGCTCACGAGCGACCATCTTCGACCGCTATT CTTTGACAGATAGCCAAGGTAACCCCCTGAGCACATATACCCATGGCTTTCGCCATAAGCTCAACGACGCTCTGGATAAG GGCGGTGCACCGGACGTCATTCAGGCACAGTGGTTCGGGCGTGCGAATCCGCGCGACAACAAGGCATATCAGTATCGCAC TCATGCAGAAATGCGAGAGCGAGCGCGCGACATGCTCATCAAGGGCCAACTCAATGGGCGATTTGCAACGTTGCTTAGCC AGGTCACGCCGGAGTGCCGAAAGGAGGCTGCTGAGTCCATGGTGCAAGTCGCGCATCCTATATCCGGGGGCTACTGCTTG CAGAATTTCGCACAAGTCGACTGCGAGCACTGTGGTCAGTGTCTCGATGAGTGCATGTCTTTTCACTGGGTACCGGGCGA AACCGACCGACAAGACGAAGTCATCGCCATCCGAGACACCATTTCGCGAAAGCTGAATGTCATGCTCGACAAGATGTCCC CTACCGAAAGACAGAACGACGAGTCGTTCTCACGACTACGTCATCAGCAAAACTTCGTGAACCAAATCCTGAAATCTATG GAGGAGAGCAAGGTTGGTGAACCGAACAAAACCTAA
Upstream 100 bases:
>100_bases ATGGCCGCTCTTATTGACCGCACCATTTTCGGTGTTTCGCACGTGAAGCTGTTGATTGAGGAAATGAAGAGTGAGCAAGA GTTCAGTTGAGCGGACGGAC
Downstream 100 bases:
>100_bases GAAGGGTGCAAGAGCTAGAGCCGTACCCAAGATGGGGCCTCGCGACACCGAACGCGTAATGAAGGAGCTTCTTGCTTTCG AGCAAGGAAAGCGAGCTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 651; Mature: 650
Protein sequence:
>651_residues MALAALQHVATVRPVASVVRIDPRTDSCIVARRSLIELYKTSQPFGEINWLSSCWDITDALRDKIKGYTARKRALVHFTR HREVGQRIGLPFPEEDDLASVIKAFACRQHVLNGVTAARHMVYIRAWRYIVGAMRGTDIAQVTPATFNSAALAATREKSS SAYTVHGALEAIADMLDELRLTKVPLRWRWVKKKRGKGYGGSKQIRLGQAPDTDRRASDDVVYAVAQLYRIVPKTKWADR ICVLLATILVCTGLRLGQVLCLRAEMPAFDEATGEHFIRLVAFKRTDATRKTLLSETVGLLNDVFRELLEITEPVREVAR WLDKNPGRVNLPKPDNSDGTVTAARLRTWFGLSTGAFKRRLQTWGFAGAAIPLHELNERLLRDRFDKPVVPGTRGEQLLL KDCLSISFVSAMKQTTAALKHAVRPIGEQHVSDRLRGRQLGDGRSRATIFDRYSLTDSQGNPLSTYTHGFRHKLNDALDK GGAPDVIQAQWFGRANPRDNKAYQYRTHAEMRERARDMLIKGQLNGRFATLLSQVTPECRKEAAESMVQVAHPISGGYCL QNFAQVDCEHCGQCLDECMSFHWVPGETDRQDEVIAIRDTISRKLNVMLDKMSPTERQNDESFSRLRHQQNFVNQILKSM EESKVGEPNKT
Sequences:
>Translated_651_residues MALAALQHVATVRPVASVVRIDPRTDSCIVARRSLIELYKTSQPFGEINWLSSCWDITDALRDKIKGYTARKRALVHFTR HREVGQRIGLPFPEEDDLASVIKAFACRQHVLNGVTAARHMVYIRAWRYIVGAMRGTDIAQVTPATFNSAALAATREKSS SAYTVHGALEAIADMLDELRLTKVPLRWRWVKKKRGKGYGGSKQIRLGQAPDTDRRASDDVVYAVAQLYRIVPKTKWADR ICVLLATILVCTGLRLGQVLCLRAEMPAFDEATGEHFIRLVAFKRTDATRKTLLSETVGLLNDVFRELLEITEPVREVAR WLDKNPGRVNLPKPDNSDGTVTAARLRTWFGLSTGAFKRRLQTWGFAGAAIPLHELNERLLRDRFDKPVVPGTRGEQLLL KDCLSISFVSAMKQTTAALKHAVRPIGEQHVSDRLRGRQLGDGRSRATIFDRYSLTDSQGNPLSTYTHGFRHKLNDALDK GGAPDVIQAQWFGRANPRDNKAYQYRTHAEMRERARDMLIKGQLNGRFATLLSQVTPECRKEAAESMVQVAHPISGGYCL QNFAQVDCEHCGQCLDECMSFHWVPGETDRQDEVIAIRDTISRKLNVMLDKMSPTERQNDESFSRLRHQQNFVNQILKSM EESKVGEPNKT >Mature_650_residues ALAALQHVATVRPVASVVRIDPRTDSCIVARRSLIELYKTSQPFGEINWLSSCWDITDALRDKIKGYTARKRALVHFTRH REVGQRIGLPFPEEDDLASVIKAFACRQHVLNGVTAARHMVYIRAWRYIVGAMRGTDIAQVTPATFNSAALAATREKSSS AYTVHGALEAIADMLDELRLTKVPLRWRWVKKKRGKGYGGSKQIRLGQAPDTDRRASDDVVYAVAQLYRIVPKTKWADRI CVLLATILVCTGLRLGQVLCLRAEMPAFDEATGEHFIRLVAFKRTDATRKTLLSETVGLLNDVFRELLEITEPVREVARW LDKNPGRVNLPKPDNSDGTVTAARLRTWFGLSTGAFKRRLQTWGFAGAAIPLHELNERLLRDRFDKPVVPGTRGEQLLLK DCLSISFVSAMKQTTAALKHAVRPIGEQHVSDRLRGRQLGDGRSRATIFDRYSLTDSQGNPLSTYTHGFRHKLNDALDKG GAPDVIQAQWFGRANPRDNKAYQYRTHAEMRERARDMLIKGQLNGRFATLLSQVTPECRKEAAESMVQVAHPISGGYCLQ NFAQVDCEHCGQCLDECMSFHWVPGETDRQDEVIAIRDTISRKLNVMLDKMSPTERQNDESFSRLRHQQNFVNQILKSME ESKVGEPNKT
Specific function: Unknown
COG id: COG4688
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73399; Mature: 73268
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAALQHVATVRPVASVVRIDPRTDSCIVARRSLIELYKTSQPFGEINWLSSCWDITDA CCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LRDKIKGYTARKRALVHFTRHREVGQRIGLPFPEEDDLASVIKAFACRQHVLNGVTAARH HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MVYIRAWRYIVGAMRGTDIAQVTPATFNSAALAATREKSSSAYTVHGALEAIADMLDELR HHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH LTKVPLRWRWVKKKRGKGYGGSKQIRLGQAPDTDRRASDDVVYAVAQLYRIVPKTKWADR HHCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH ICVLLATILVCTGLRLGQVLCLRAEMPAFDEATGEHFIRLVAFKRTDATRKTLLSETVGL HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LNDVFRELLEITEPVREVARWLDKNPGRVNLPKPDNSDGTVTAARLRTWFGLSTGAFKRR HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEHHHHHHHHCCCHHHHHHH LQTWGFAGAAIPLHELNERLLRDRFDKPVVPGTRGEQLLLKDCLSISFVSAMKQTTAALK HHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HAVRPIGEQHVSDRLRGRQLGDGRSRATIFDRYSLTDSQGNPLSTYTHGFRHKLNDALDK HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHC GGAPDVIQAQWFGRANPRDNKAYQYRTHAEMRERARDMLIKGQLNGRFATLLSQVTPECR CCCCCCCHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHH KEAAESMVQVAHPISGGYCLQNFAQVDCEHCGQCLDECMSFHWVPGETDRQDEVIAIRDT HHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHH ISRKLNVMLDKMSPTERQNDESFSRLRHQQNFVNQILKSMEESKVGEPNKT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ALAALQHVATVRPVASVVRIDPRTDSCIVARRSLIELYKTSQPFGEINWLSSCWDITDA CHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LRDKIKGYTARKRALVHFTRHREVGQRIGLPFPEEDDLASVIKAFACRQHVLNGVTAARH HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MVYIRAWRYIVGAMRGTDIAQVTPATFNSAALAATREKSSSAYTVHGALEAIADMLDELR HHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH LTKVPLRWRWVKKKRGKGYGGSKQIRLGQAPDTDRRASDDVVYAVAQLYRIVPKTKWADR HHCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH ICVLLATILVCTGLRLGQVLCLRAEMPAFDEATGEHFIRLVAFKRTDATRKTLLSETVGL HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LNDVFRELLEITEPVREVARWLDKNPGRVNLPKPDNSDGTVTAARLRTWFGLSTGAFKRR HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEHHHHHHHHCCCHHHHHHH LQTWGFAGAAIPLHELNERLLRDRFDKPVVPGTRGEQLLLKDCLSISFVSAMKQTTAALK HHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HAVRPIGEQHVSDRLRGRQLGDGRSRATIFDRYSLTDSQGNPLSTYTHGFRHKLNDALDK HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHC GGAPDVIQAQWFGRANPRDNKAYQYRTHAEMRERARDMLIKGQLNGRFATLLSQVTPECR CCCCCCCHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHH KEAAESMVQVAHPISGGYCLQNFAQVDCEHCGQCLDECMSFHWVPGETDRQDEVIAIRDT HHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHH ISRKLNVMLDKMSPTERQNDESFSRLRHQQNFVNQILKSMEESKVGEPNKT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA