| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718212
Identifier: 53718212
GI number: 53718212
Start: 628668
End: 629738
Strand: Reverse
Name: 53718212
Synonym: BPSL0572
Alternate gene names: NA
Gene position: 629738-628668 (Counterclockwise)
Preceding gene: 53718216
Following gene: 53718208
Centisome position: 15.46
GC content: 56.12
Gene sequence:
>1071_bases GTGACGGTTTGCATCGCGTCGTCGCTCAAAACCTATGCGATGAGCATTGCCAATTCGCTGTCCCGCCGGTATTCAGGCGC GAGCGACTTCCATATGGGGCAGCGGCTACGGGTGCGGACATGCGATATATTGATGCAGTCATCATCGACGGAAAAAACTA TGTCCCGCCTCGGTATCGAACACGACCACGGCCTCGTCTATGAGGGCACCGACCATCCAAGCCACCTCACTGTCCCTGCG CCAATAATTTCACAGTGCGTACTCATTGAGTCCCCGTCTAACCTCGACGATTTGCCTAGCGGGATGCTGAGTGACCCGTT TCGATGGATTTTTCGCGAGGACTCGTTCGACCCGGTGTCGCGCGTTCGGCGAGGTCGCCTTTTCCAGCCGTTTGAAAGAG CCAATCGCGTATCGTATTTCGTTGAAGCACATCCCAACTTGCTATCGGATAGTCGCCGGAGGACCGAAGACGGTCGGGTC CAGAAGGAATTGAATGTGTTCATTCACTGCACCGAACTGTTGCGACGTGCCAATCGAGGGGAGGGGCTCCAACTGGCGAT AGGCAACGCGCAGGCGCACTCACTATGGCGAATCCTGCAAACAGAGCAGACGGTGAGTCAGGATGTTTTGGTGACGCTTC GAGCAGAGTCTGCGTTTGGTGTCCTTCCCGCTCTCAACATTGACCAAGCTCCGGACGAAACGCGCAAGTCGGTGTCGGAT GCCTACGAGCGCGTCATGCAAGTGGCATATAGGGACTCGCCAACATCGGTCGTCGACCAATGCCGTAACCTGTGTGCCGT CGTCAGCGCGCGGTGGCTGTACAAGTTGACAGGAAACAGAGCAATGCTCGAAGAAGACCTTGGCGATTGCATTACAGCGG TCAAGAAGCACTTCGGCGAGAAGGAGCAACGGCTCATTCGCGCGTCCCTCGAAACGGTTAATCTCCTCCATCCGAGGGGA AAAGATAACGAACGCGAACGCTACAAACTTCGCGAGGTATCAAAGGAGGACGCCGAACTTGCCTTGCACGCAACGGGCTT CTTGCTGAGAGAGCTCGGATGGGGATGCTGA
Upstream 100 bases:
>100_bases GCCGCTCAACTAACATAGTCCACCATAACCTCCAGAAAACCAACTTGCGACTTAGGCAGCGGCGCAAGATGTACCGGAAA CTCGAAAGCGAACGGCTCGC
Downstream 100 bases:
>100_bases GACTCTCCCATTTTGGTGATTGGCGGTACATCGGTCGTAGACTTTGCCGGCGCCTTGCAGATGGTAGCGCTGATGTACCG TTGTCTATGGCGAAGGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTVCIASSLKTYAMSIANSLSRRYSGASDFHMGQRLRVRTCDILMQSSSTEKTMSRLGIEHDHGLVYEGTDHPSHLTVPA PIISQCVLIESPSNLDDLPSGMLSDPFRWIFREDSFDPVSRVRRGRLFQPFERANRVSYFVEAHPNLLSDSRRRTEDGRV QKELNVFIHCTELLRRANRGEGLQLAIGNAQAHSLWRILQTEQTVSQDVLVTLRAESAFGVLPALNIDQAPDETRKSVSD AYERVMQVAYRDSPTSVVDQCRNLCAVVSARWLYKLTGNRAMLEEDLGDCITAVKKHFGEKEQRLIRASLETVNLLHPRG KDNERERYKLREVSKEDAELALHATGFLLRELGWGC
Sequences:
>Translated_356_residues MTVCIASSLKTYAMSIANSLSRRYSGASDFHMGQRLRVRTCDILMQSSSTEKTMSRLGIEHDHGLVYEGTDHPSHLTVPA PIISQCVLIESPSNLDDLPSGMLSDPFRWIFREDSFDPVSRVRRGRLFQPFERANRVSYFVEAHPNLLSDSRRRTEDGRV QKELNVFIHCTELLRRANRGEGLQLAIGNAQAHSLWRILQTEQTVSQDVLVTLRAESAFGVLPALNIDQAPDETRKSVSD AYERVMQVAYRDSPTSVVDQCRNLCAVVSARWLYKLTGNRAMLEEDLGDCITAVKKHFGEKEQRLIRASLETVNLLHPRG KDNERERYKLREVSKEDAELALHATGFLLRELGWGC >Mature_355_residues TVCIASSLKTYAMSIANSLSRRYSGASDFHMGQRLRVRTCDILMQSSSTEKTMSRLGIEHDHGLVYEGTDHPSHLTVPAP IISQCVLIESPSNLDDLPSGMLSDPFRWIFREDSFDPVSRVRRGRLFQPFERANRVSYFVEAHPNLLSDSRRRTEDGRVQ KELNVFIHCTELLRRANRGEGLQLAIGNAQAHSLWRILQTEQTVSQDVLVTLRAESAFGVLPALNIDQAPDETRKSVSDA YERVMQVAYRDSPTSVVDQCRNLCAVVSARWLYKLTGNRAMLEEDLGDCITAVKKHFGEKEQRLIRASLETVNLLHPRGK DNERERYKLREVSKEDAELALHATGFLLRELGWGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40359; Mature: 40228
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVCIASSLKTYAMSIANSLSRRYSGASDFHMGQRLRVRTCDILMQSSSTEKTMSRLGIE CEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC HDHGLVYEGTDHPSHLTVPAPIISQCVLIESPSNLDDLPSGMLSDPFRWIFREDSFDPVS CCCCEEEECCCCCCCEEECHHHHHCEEEEECCCCCCCCCCCHHCCCHHHHHCCCCCCHHH RVRRGRLFQPFERANRVSYFVEAHPNLLSDSRRRTEDGRVQKELNVFIHCTELLRRANRG HHHCCCCCCHHHHHCHHEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC EGLQLAIGNAQAHSLWRILQTEQTVSQDVLVTLRAESAFGVLPALNIDQAPDETRKSVSD CCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH AYERVMQVAYRDSPTSVVDQCRNLCAVVSARWLYKLTGNRAMLEEDLGDCITAVKKHFGE HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCH KEQRLIRASLETVNLLHPRGKDNERERYKLREVSKEDAELALHATGFLLRELGWGC HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHEEHHHHHHHHHHCCCCC >Mature Secondary Structure TVCIASSLKTYAMSIANSLSRRYSGASDFHMGQRLRVRTCDILMQSSSTEKTMSRLGIE EEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC HDHGLVYEGTDHPSHLTVPAPIISQCVLIESPSNLDDLPSGMLSDPFRWIFREDSFDPVS CCCCEEEECCCCCCCEEECHHHHHCEEEEECCCCCCCCCCCHHCCCHHHHHCCCCCCHHH RVRRGRLFQPFERANRVSYFVEAHPNLLSDSRRRTEDGRVQKELNVFIHCTELLRRANRG HHHCCCCCCHHHHHCHHEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC EGLQLAIGNAQAHSLWRILQTEQTVSQDVLVTLRAESAFGVLPALNIDQAPDETRKSVSD CCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH AYERVMQVAYRDSPTSVVDQCRNLCAVVSARWLYKLTGNRAMLEEDLGDCITAVKKHFGE HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCH KEQRLIRASLETVNLLHPRGKDNERERYKLREVSKEDAELALHATGFLLRELGWGC HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHEEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA