Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is yhhJ [C]

Identifier: 53718117

GI number: 53718117

Start: 518799

End: 519890

Strand: Reverse

Name: yhhJ [C]

Synonym: BPSL0478

Alternate gene names: 53718117

Gene position: 519890-518799 (Counterclockwise)

Preceding gene: 53718118

Following gene: 53718116

Centisome position: 12.76

GC content: 70.97

Gene sequence:

>1092_bases
ATGCTTGAGGTTTTTCTGATTCTCACCCGCAACGAGTTGCTCGGGCAGTTGCGCAGCAAGGCGCGGCTCTTCTGGACGTT
CGTCTTTCCGATCCTGCTGATGAGCGTGATGCTCGTCGCGTTCGGCAAGCACAGCTCGCTCGGCGTCGTCGAGCTCGCGT
TCGACGGCAACGCCGCCGCGCCGCAGGCGCGCGCGTGCCGCGCCGCGATCGAGGCCGCGTTCGCGGGCAACGGCACGGTG
GGCGCGCGCGTCGTCGCGCCGAACGCGGCCGGCGCGGCGGGCGGCGATCGCGTGCGCGTGAGCTGGCCCGCGCGGGCGGC
CGATCCCGTGCGCGTCTCGTACGATTTCAACGGCCCGCTCGCGGCGCGCGCGGCCGCGCGCACGATCGAGATCGCGCTCG
TGCGCTGCGCGGCGTCCGAAGCCGGCCTGCCCGCCGCGTACCAGGTGCGCTTCGAGAACGACGGCCATGCGCTCGCGCCG
CTCGATTACGGCGAGTTCTTCGCGACGGGCATCCTGATCATGGCGTTCATGTCGATCGGCGTCGTGTCGACCGCGACGAC
GATCGCGACGCTGCGCGAGCGCAACACGTTCAAGATGTACGTGTGCTTTCCGGTGTCGCGCTTCGTGTTCCTCGCGTCGC
TGATCGTCTCGCGCGTGATCCTGATGCTCGCCGCGTCGGTGACGCTGATGCTCGCCGCGCGCTACCTGTTCCAGGTGCCG
CTGCCGCTCTGGAGCCTGCGCGCGCTGCGCGCGATTCCGGTCGTGCTGCTCGGCGCCGCGATGCTGCTGAGCCTCGGCAC
GCTGCTCGCGAGCCGCGCGCGCTCGCTCGCCGCCGCCGAGGCGTGGTGCAACCTGATCTATTTCCCGCTGCTGTTCTTCA
GCGATCTGACGATTCCGCTGCGCGCCGCGCCGCACTGGCTGCGCGTCGTGCTGCTCGTGCTGCCGACCAACCAGTTCGCG
GTCGCGCTGCGCGGCGTGTTCGTGCGCGACCTCGGCTACGCGCAGGCCGCGTGGCCGCTCGCCGTCGTCGCGGGCTGGAC
GCTCGTGTTCCTCGCCGGCGCCGCGCTGACGTTCCGCTGGCATCAGGACTGA

Upstream 100 bases:

>100_bases
GCGCTGCGCACGCTGATGGAGCAGGCGGGCATCCGGCATTTCGAATTCGCGCCGACCGACGAAGGCGACCTGCTGCGCGC
ATGCACCGAAGGAGCGACCG

Downstream 100 bases:

>100_bases
GCAGATCGGGACCGAGCAGGACTGAAAGCAGGACCGAACCGGCGCCGGTTCGCATCGAAGGAGTTCATCGCGTCATGCCC
GATCTGATCCTCGCGTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MLEVFLILTRNELLGQLRSKARLFWTFVFPILLMSVMLVAFGKHSSLGVVELAFDGNAAAPQARACRAAIEAAFAGNGTV
GARVVAPNAAGAAGGDRVRVSWPARAADPVRVSYDFNGPLAARAAARTIEIALVRCAASEAGLPAAYQVRFENDGHALAP
LDYGEFFATGILIMAFMSIGVVSTATTIATLRERNTFKMYVCFPVSRFVFLASLIVSRVILMLAASVTLMLAARYLFQVP
LPLWSLRALRAIPVVLLGAAMLLSLGTLLASRARSLAAAEAWCNLIYFPLLFFSDLTIPLRAAPHWLRVVLLVLPTNQFA
VALRGVFVRDLGYAQAAWPLAVVAGWTLVFLAGAALTFRWHQD

Sequences:

>Translated_363_residues
MLEVFLILTRNELLGQLRSKARLFWTFVFPILLMSVMLVAFGKHSSLGVVELAFDGNAAAPQARACRAAIEAAFAGNGTV
GARVVAPNAAGAAGGDRVRVSWPARAADPVRVSYDFNGPLAARAAARTIEIALVRCAASEAGLPAAYQVRFENDGHALAP
LDYGEFFATGILIMAFMSIGVVSTATTIATLRERNTFKMYVCFPVSRFVFLASLIVSRVILMLAASVTLMLAARYLFQVP
LPLWSLRALRAIPVVLLGAAMLLSLGTLLASRARSLAAAEAWCNLIYFPLLFFSDLTIPLRAAPHWLRVVLLVLPTNQFA
VALRGVFVRDLGYAQAAWPLAVVAGWTLVFLAGAALTFRWHQD
>Mature_363_residues
MLEVFLILTRNELLGQLRSKARLFWTFVFPILLMSVMLVAFGKHSSLGVVELAFDGNAAAPQARACRAAIEAAFAGNGTV
GARVVAPNAAGAAGGDRVRVSWPARAADPVRVSYDFNGPLAARAAARTIEIALVRCAASEAGLPAAYQVRFENDGHALAP
LDYGEFFATGILIMAFMSIGVVSTATTIATLRERNTFKMYVCFPVSRFVFLASLIVSRVILMLAASVTLMLAARYLFQVP
LPLWSLRALRAIPVVLLGAAMLLSLGTLLASRARSLAAAEAWCNLIYFPLLFFSDLTIPLRAAPHWLRVVLLVLPTNQFA
VALRGVFVRDLGYAQAAWPLAVVAGWTLVFLAGAALTFRWHQD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39167; Mature: 39167

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEVFLILTRNELLGQLRSKARLFWTFVFPILLMSVMLVAFGKHSSLGVVELAFDGNAAA
CEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
PQARACRAAIEAAFAGNGTVGARVVAPNAAGAAGGDRVRVSWPARAADPVRVSYDFNGPL
CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCH
AARAAARTIEIALVRCAASEAGLPAAYQVRFENDGHALAPLDYGEFFATGILIMAFMSIG
HHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHH
VVSTATTIATLRERNTFKMYVCFPVSRFVFLASLIVSRVILMLAASVTLMLAARYLFQVP
HHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPLWSLRALRAIPVVLLGAAMLLSLGTLLASRARSLAAAEAWCNLIYFPLLFFSDLTIPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RAAPHWLRVVLLVLPTNQFAVALRGVFVRDLGYAQAAWPLAVVAGWTLVFLAGAALTFRW
HCCHHHHHHHHHEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE
HQD
ECC
>Mature Secondary Structure
MLEVFLILTRNELLGQLRSKARLFWTFVFPILLMSVMLVAFGKHSSLGVVELAFDGNAAA
CEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
PQARACRAAIEAAFAGNGTVGARVVAPNAAGAAGGDRVRVSWPARAADPVRVSYDFNGPL
CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCH
AARAAARTIEIALVRCAASEAGLPAAYQVRFENDGHALAPLDYGEFFATGILIMAFMSIG
HHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHH
VVSTATTIATLRERNTFKMYVCFPVSRFVFLASLIVSRVILMLAASVTLMLAARYLFQVP
HHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPLWSLRALRAIPVVLLGAAMLLSLGTLLASRARSLAAAEAWCNLIYFPLLFFSDLTIPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RAAPHWLRVVLLVLPTNQFAVALRGVFVRDLGYAQAAWPLAVVAGWTLVFLAGAALTFRW
HCCHHHHHHHHHEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE
HQD
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA