| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is yhhJ [C]
Identifier: 53718117
GI number: 53718117
Start: 518799
End: 519890
Strand: Reverse
Name: yhhJ [C]
Synonym: BPSL0478
Alternate gene names: 53718117
Gene position: 519890-518799 (Counterclockwise)
Preceding gene: 53718118
Following gene: 53718116
Centisome position: 12.76
GC content: 70.97
Gene sequence:
>1092_bases ATGCTTGAGGTTTTTCTGATTCTCACCCGCAACGAGTTGCTCGGGCAGTTGCGCAGCAAGGCGCGGCTCTTCTGGACGTT CGTCTTTCCGATCCTGCTGATGAGCGTGATGCTCGTCGCGTTCGGCAAGCACAGCTCGCTCGGCGTCGTCGAGCTCGCGT TCGACGGCAACGCCGCCGCGCCGCAGGCGCGCGCGTGCCGCGCCGCGATCGAGGCCGCGTTCGCGGGCAACGGCACGGTG GGCGCGCGCGTCGTCGCGCCGAACGCGGCCGGCGCGGCGGGCGGCGATCGCGTGCGCGTGAGCTGGCCCGCGCGGGCGGC CGATCCCGTGCGCGTCTCGTACGATTTCAACGGCCCGCTCGCGGCGCGCGCGGCCGCGCGCACGATCGAGATCGCGCTCG TGCGCTGCGCGGCGTCCGAAGCCGGCCTGCCCGCCGCGTACCAGGTGCGCTTCGAGAACGACGGCCATGCGCTCGCGCCG CTCGATTACGGCGAGTTCTTCGCGACGGGCATCCTGATCATGGCGTTCATGTCGATCGGCGTCGTGTCGACCGCGACGAC GATCGCGACGCTGCGCGAGCGCAACACGTTCAAGATGTACGTGTGCTTTCCGGTGTCGCGCTTCGTGTTCCTCGCGTCGC TGATCGTCTCGCGCGTGATCCTGATGCTCGCCGCGTCGGTGACGCTGATGCTCGCCGCGCGCTACCTGTTCCAGGTGCCG CTGCCGCTCTGGAGCCTGCGCGCGCTGCGCGCGATTCCGGTCGTGCTGCTCGGCGCCGCGATGCTGCTGAGCCTCGGCAC GCTGCTCGCGAGCCGCGCGCGCTCGCTCGCCGCCGCCGAGGCGTGGTGCAACCTGATCTATTTCCCGCTGCTGTTCTTCA GCGATCTGACGATTCCGCTGCGCGCCGCGCCGCACTGGCTGCGCGTCGTGCTGCTCGTGCTGCCGACCAACCAGTTCGCG GTCGCGCTGCGCGGCGTGTTCGTGCGCGACCTCGGCTACGCGCAGGCCGCGTGGCCGCTCGCCGTCGTCGCGGGCTGGAC GCTCGTGTTCCTCGCCGGCGCCGCGCTGACGTTCCGCTGGCATCAGGACTGA
Upstream 100 bases:
>100_bases GCGCTGCGCACGCTGATGGAGCAGGCGGGCATCCGGCATTTCGAATTCGCGCCGACCGACGAAGGCGACCTGCTGCGCGC ATGCACCGAAGGAGCGACCG
Downstream 100 bases:
>100_bases GCAGATCGGGACCGAGCAGGACTGAAAGCAGGACCGAACCGGCGCCGGTTCGCATCGAAGGAGTTCATCGCGTCATGCCC GATCTGATCCTCGCGTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MLEVFLILTRNELLGQLRSKARLFWTFVFPILLMSVMLVAFGKHSSLGVVELAFDGNAAAPQARACRAAIEAAFAGNGTV GARVVAPNAAGAAGGDRVRVSWPARAADPVRVSYDFNGPLAARAAARTIEIALVRCAASEAGLPAAYQVRFENDGHALAP LDYGEFFATGILIMAFMSIGVVSTATTIATLRERNTFKMYVCFPVSRFVFLASLIVSRVILMLAASVTLMLAARYLFQVP LPLWSLRALRAIPVVLLGAAMLLSLGTLLASRARSLAAAEAWCNLIYFPLLFFSDLTIPLRAAPHWLRVVLLVLPTNQFA VALRGVFVRDLGYAQAAWPLAVVAGWTLVFLAGAALTFRWHQD
Sequences:
>Translated_363_residues MLEVFLILTRNELLGQLRSKARLFWTFVFPILLMSVMLVAFGKHSSLGVVELAFDGNAAAPQARACRAAIEAAFAGNGTV GARVVAPNAAGAAGGDRVRVSWPARAADPVRVSYDFNGPLAARAAARTIEIALVRCAASEAGLPAAYQVRFENDGHALAP LDYGEFFATGILIMAFMSIGVVSTATTIATLRERNTFKMYVCFPVSRFVFLASLIVSRVILMLAASVTLMLAARYLFQVP LPLWSLRALRAIPVVLLGAAMLLSLGTLLASRARSLAAAEAWCNLIYFPLLFFSDLTIPLRAAPHWLRVVLLVLPTNQFA VALRGVFVRDLGYAQAAWPLAVVAGWTLVFLAGAALTFRWHQD >Mature_363_residues MLEVFLILTRNELLGQLRSKARLFWTFVFPILLMSVMLVAFGKHSSLGVVELAFDGNAAAPQARACRAAIEAAFAGNGTV GARVVAPNAAGAAGGDRVRVSWPARAADPVRVSYDFNGPLAARAAARTIEIALVRCAASEAGLPAAYQVRFENDGHALAP LDYGEFFATGILIMAFMSIGVVSTATTIATLRERNTFKMYVCFPVSRFVFLASLIVSRVILMLAASVTLMLAARYLFQVP LPLWSLRALRAIPVVLLGAAMLLSLGTLLASRARSLAAAEAWCNLIYFPLLFFSDLTIPLRAAPHWLRVVLLVLPTNQFA VALRGVFVRDLGYAQAAWPLAVVAGWTLVFLAGAALTFRWHQD
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39167; Mature: 39167
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEVFLILTRNELLGQLRSKARLFWTFVFPILLMSVMLVAFGKHSSLGVVELAFDGNAAA CEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC PQARACRAAIEAAFAGNGTVGARVVAPNAAGAAGGDRVRVSWPARAADPVRVSYDFNGPL CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCH AARAAARTIEIALVRCAASEAGLPAAYQVRFENDGHALAPLDYGEFFATGILIMAFMSIG HHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHH VVSTATTIATLRERNTFKMYVCFPVSRFVFLASLIVSRVILMLAASVTLMLAARYLFQVP HHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPLWSLRALRAIPVVLLGAAMLLSLGTLLASRARSLAAAEAWCNLIYFPLLFFSDLTIPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH RAAPHWLRVVLLVLPTNQFAVALRGVFVRDLGYAQAAWPLAVVAGWTLVFLAGAALTFRW HCCHHHHHHHHHEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE HQD ECC >Mature Secondary Structure MLEVFLILTRNELLGQLRSKARLFWTFVFPILLMSVMLVAFGKHSSLGVVELAFDGNAAA CEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC PQARACRAAIEAAFAGNGTVGARVVAPNAAGAAGGDRVRVSWPARAADPVRVSYDFNGPL CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCH AARAAARTIEIALVRCAASEAGLPAAYQVRFENDGHALAPLDYGEFFATGILIMAFMSIG HHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHH VVSTATTIATLRERNTFKMYVCFPVSRFVFLASLIVSRVILMLAASVTLMLAARYLFQVP HHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPLWSLRALRAIPVVLLGAAMLLSLGTLLASRARSLAAAEAWCNLIYFPLLFFSDLTIPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH RAAPHWLRVVLLVLPTNQFAVALRGVFVRDLGYAQAAWPLAVVAGWTLVFLAGAALTFRW HCCHHHHHHHHHEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE HQD ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA