| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718116
Identifier: 53718116
GI number: 53718116
Start: 518191
End: 518724
Strand: Reverse
Name: 53718116
Synonym: BPSL0477
Alternate gene names: NA
Gene position: 518724-518191 (Counterclockwise)
Preceding gene: 53718117
Following gene: 53718115
Centisome position: 12.73
GC content: 76.78
Gene sequence:
>534_bases ATGCCCGATCTGATCCTCGCGTATTTGCGCAACGCGGCGCTGTTCGCGCCGGCGATCGCTTTCATGCTGTTCATGCGCGC GCTGCCGGGCGGCGGCGACGCGCACTGGCGGCACGCGGCGCTCGCGGGCGCGCTGCTCGCGCTGCCGCACACCGCGTGGC TGCTGCGCCGGCGGCCGCTGCACGGCACCGCGCTCGGCCTGAACGCGTACCTGATCGTCAGCGCCGCGCTGCCGTTCGTG TCGGCCGACGCGGCCCGCGACTGGGGCGCCGCGCTCGGCTCGGCCGCGATGCTCGGGAGCGTGCTCGCCGCGCACGCGCT CGGGCTGGCCGTCGCGCCCGAGGCGTTTTCCGGCGCGGCCGATCCGGCGCTCGCGCGGGCGCGCTGCAGGAAGATGACCG TCTACAGCGGGATCGCGCTCGCCGCCGCGTTCCCGCACCGGCACGACCCGCTCCTCGGCGGCGCGCTGCCCGTCGTCGCG CTGATCCTGCTGCACAAACGGCTGCGGCGCGGCGCGCTCGCGCCGAGCGCGTGA
Upstream 100 bases:
>100_bases TGACGTTCCGCTGGCATCAGGACTGAGCAGATCGGGACCGAGCAGGACTGAAAGCAGGACCGAACCGGCGCCGGTTCGCA TCGAAGGAGTTCATCGCGTC
Downstream 100 bases:
>100_bases TCCGCGGGGAGTCGCCCCGCCCTTTCTTCGTGAGGTAGGTAGCCATGCAAGACGTCGATCCCGCCTATGCCTTCGTCCGC GCCCGCGAATCGGGCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MPDLILAYLRNAALFAPAIAFMLFMRALPGGGDAHWRHAALAGALLALPHTAWLLRRRPLHGTALGLNAYLIVSAALPFV SADAARDWGAALGSAAMLGSVLAAHALGLAVAPEAFSGAADPALARARCRKMTVYSGIALAAAFPHRHDPLLGGALPVVA LILLHKRLRRGALAPSA
Sequences:
>Translated_177_residues MPDLILAYLRNAALFAPAIAFMLFMRALPGGGDAHWRHAALAGALLALPHTAWLLRRRPLHGTALGLNAYLIVSAALPFV SADAARDWGAALGSAAMLGSVLAAHALGLAVAPEAFSGAADPALARARCRKMTVYSGIALAAAFPHRHDPLLGGALPVVA LILLHKRLRRGALAPSA >Mature_176_residues PDLILAYLRNAALFAPAIAFMLFMRALPGGGDAHWRHAALAGALLALPHTAWLLRRRPLHGTALGLNAYLIVSAALPFVS ADAARDWGAALGSAAMLGSVLAAHALGLAVAPEAFSGAADPALARARCRKMTVYSGIALAAAFPHRHDPLLGGALPVVAL ILLHKRLRRGALAPSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18310; Mature: 18179
Theoretical pI: Translated: 11.78; Mature: 11.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLILAYLRNAALFAPAIAFMLFMRALPGGGDAHWRHAALAGALLALPHTAWLLRRRPL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC HGTALGLNAYLIVSAALPFVSADAARDWGAALGSAAMLGSVLAAHALGLAVAPEAFSGAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC DPALARARCRKMTVYSGIALAAAFPHRHDPLLGGALPVVALILLHKRLRRGALAPSA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PDLILAYLRNAALFAPAIAFMLFMRALPGGGDAHWRHAALAGALLALPHTAWLLRRRPL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC HGTALGLNAYLIVSAALPFVSADAARDWGAALGSAAMLGSVLAAHALGLAVAPEAFSGAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC DPALARARCRKMTVYSGIALAAAFPHRHDPLLGGALPVVALILLHKRLRRGALAPSA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA