| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is fbpC [H]
Identifier: 53718118
GI number: 53718118
Start: 519883
End: 520839
Strand: Reverse
Name: fbpC [H]
Synonym: BPSL0479
Alternate gene names: 53718118
Gene position: 520839-519883 (Counterclockwise)
Preceding gene: 53718119
Following gene: 53718117
Centisome position: 12.78
GC content: 73.35
Gene sequence:
>957_bases ATGGAAGGCGGCGCAGCCGTCGCGCGCGGCGCGACGCCGGGCCGCGCGGCGAGCGCGCTCGCCGCGCGCCGCATCGACGT GAAGGCGGGCGACTTCACGTTCCACGCCACCGACATCGCGTTTCGCACCGGCGCGCTGACCGCGATCGTCGGCCCGAACG GCTCCGGCAAGAGCACGCTGCTCGAGGCGCTGTTCGGCTTTCGCCGCGCGCAGCTCGAGGGCGCGACGATCCTCGGTGTG CCCGCCGCGCGATTCATGCGCGACACGCGCGCGCTGCGGCGCTTCGGCGCGCAATTGCAGCGCGTCGAATACGCGGAGCA CGCGCGCGTCGACGAGATCCTCGCCGTGCACCGCGCGCTGTACCGCAAACAGGACGCCGCGGTGGCCCGCGCGCTCGCGA TCGACGAGCTGCGCGCGAAGCCGTACAGCGGGCTGTCGAAGGGGCAGCGGCAGCGGCTCGACCTGTTCATCGCGTTCGCG CATCGCCCGGCGCTCGTCGCGCTCGACGAACCGTTCACCGGCCTCGACCGCACGATGACGCGCAGCGTGCTCGGCCTGCT GCGCGGCCCGCTCGCGGGCATCACGATCGCGATGATCTGCCACGCGGGCGAAGAGCTCGCGATCGCCGACGACGTGCTGT GGGTGCGCGACGGCACGCTGCGCTACCAGGGCGGCAAGGACGCGCTCAAGCGCCGTCTCGTCGGCGAGTTCCGCGCGCTG ATTCACGTCGACGACGACGCGCAGGCCGAACGCGTGCGCGCGGTGCTCGCGCGGGACGCGCACGTGCAGCGGATCGTCGC GCCCGCGCCTCGGCAGATCGGCGCGTTCGGCCGCGCGGGGCTCGACGCCGCGCTGCGCACGCTGATGGAGCAGGCGGGCA TCCGGCATTTCGAATTCGCGCCGACCGACGAAGGCGACCTGCTGCGCGCATGCACCGAAGGAGCGACCGATGCTTGA
Upstream 100 bases:
>100_bases TGGACTGAATGCGATGAGCCCTGTTCCGTTTCCGGCCGGCGAGGCCGGCGAAGCCCTCGAAGGCGCGCAGACCGCCGAAG CGGTTGAAGCGGCTGAAGCA
Downstream 100 bases:
>100_bases GGTTTTTCTGATTCTCACCCGCAACGAGTTGCTCGGGCAGTTGCGCAGCAAGGCGCGGCTCTTCTGGACGTTCGTCTTTC CGATCCTGCTGATGAGCGTG
Product: ABC transport system ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MEGGAAVARGATPGRAASALAARRIDVKAGDFTFHATDIAFRTGALTAIVGPNGSGKSTLLEALFGFRRAQLEGATILGV PAARFMRDTRALRRFGAQLQRVEYAEHARVDEILAVHRALYRKQDAAVARALAIDELRAKPYSGLSKGQRQRLDLFIAFA HRPALVALDEPFTGLDRTMTRSVLGLLRGPLAGITIAMICHAGEELAIADDVLWVRDGTLRYQGGKDALKRRLVGEFRAL IHVDDDAQAERVRAVLARDAHVQRIVAPAPRQIGAFGRAGLDAALRTLMEQAGIRHFEFAPTDEGDLLRACTEGATDA
Sequences:
>Translated_318_residues MEGGAAVARGATPGRAASALAARRIDVKAGDFTFHATDIAFRTGALTAIVGPNGSGKSTLLEALFGFRRAQLEGATILGV PAARFMRDTRALRRFGAQLQRVEYAEHARVDEILAVHRALYRKQDAAVARALAIDELRAKPYSGLSKGQRQRLDLFIAFA HRPALVALDEPFTGLDRTMTRSVLGLLRGPLAGITIAMICHAGEELAIADDVLWVRDGTLRYQGGKDALKRRLVGEFRAL IHVDDDAQAERVRAVLARDAHVQRIVAPAPRQIGAFGRAGLDAALRTLMEQAGIRHFEFAPTDEGDLLRACTEGATDA >Mature_318_residues MEGGAAVARGATPGRAASALAARRIDVKAGDFTFHATDIAFRTGALTAIVGPNGSGKSTLLEALFGFRRAQLEGATILGV PAARFMRDTRALRRFGAQLQRVEYAEHARVDEILAVHRALYRKQDAAVARALAIDELRAKPYSGLSKGQRQRLDLFIAFA HRPALVALDEPFTGLDRTMTRSVLGLLRGPLAGITIAMICHAGEELAIADDVLWVRDGTLRYQGGKDALKRRLVGEFRAL IHVDDDAQAERVRAVLARDAHVQRIVAPAPRQIGAFGRAGLDAALRTLMEQAGIRHFEFAPTDEGDLLRACTEGATDA
Specific function: Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system [H]
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI46592898, Length=159, Percent_Identity=31.4465408805031, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI46592915, Length=159, Percent_Identity=31.4465408805031, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI46592956, Length=159, Percent_Identity=31.4465408805031, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI46592964, Length=159, Percent_Identity=31.4465408805031, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI46592971, Length=159, Percent_Identity=31.4465408805031, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI46592978, Length=159, Percent_Identity=31.4465408805031, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI153792144, Length=255, Percent_Identity=24.7058823529412, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI87081782, Length=231, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786253, Length=219, Percent_Identity=29.6803652968037, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786872, Length=223, Percent_Identity=29.1479820627803, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI48994943, Length=182, Percent_Identity=31.3186813186813, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787089, Length=199, Percent_Identity=31.6582914572864, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787712, Length=207, Percent_Identity=29.4685990338164, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786803, Length=236, Percent_Identity=30.5084745762712, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1787164, Length=218, Percent_Identity=28.8990825688073, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1787370, Length=264, Percent_Identity=28.4090909090909, Blast_Score=61, Evalue=9e-11, Organism=Drosophila melanogaster, GI28574533, Length=208, Percent_Identity=29.3269230769231, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI161076682, Length=190, Percent_Identity=25.7894736842105, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI161076684, Length=190, Percent_Identity=25.7894736842105, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24581617, Length=190, Percent_Identity=25.7894736842105, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24581615, Length=190, Percent_Identity=25.7894736842105, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI85724864, Length=202, Percent_Identity=28.7128712871287, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24580555, Length=202, Percent_Identity=28.7128712871287, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI85816269, Length=202, Percent_Identity=28.7128712871287, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24580553, Length=202, Percent_Identity=28.7128712871287, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581191, Length=153, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24581189, Length=153, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24581193, Length=153, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24581195, Length=153, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24581387, Length=201, Percent_Identity=31.3432835820896, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574744, Length=226, Percent_Identity=28.7610619469027, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581383, Length=201, Percent_Identity=31.3432835820896, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24581385, Length=201, Percent_Identity=31.3432835820896, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI85724858, Length=197, Percent_Identity=30.9644670050761, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI85724856, Length=197, Percent_Identity=30.9644670050761, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24580547, Length=197, Percent_Identity=30.9644670050761, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24580551, Length=197, Percent_Identity=30.9644670050761, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24580549, Length=197, Percent_Identity=30.9644670050761, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24580545, Length=197, Percent_Identity=30.9644670050761, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015853 - InterPro: IPR003593 - InterPro: IPR008995 - InterPro: IPR013611 [H]
Pfam domain/function: PF00005 ABC_tran; PF08402 TOBE_2 [H]
EC number: =3.6.3.30 [H]
Molecular weight: Translated: 34320; Mature: 34320
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGGAAVARGATPGRAASALAARRIDVKAGDFTFHATDIAFRTGALTAIVGPNGSGKSTL CCCCCCEECCCCCCHHHHHHHHHHEEEECCCEEEEEHHHEEECCCEEEEECCCCCCHHHH LEALFGFRRAQLEGATILGVPAARFMRDTRALRRFGAQLQRVEYAEHARVDEILAVHRAL HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRKQDAAVARALAIDELRAKPYSGLSKGQRQRLDLFIAFAHRPALVALDEPFTGLDRTMT HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEECCCEEEEECCCCCCHHHHHH RSVLGLLRGPLAGITIAMICHAGEELAIADDVLWVRDGTLRYQGGKDALKRRLVGEFRAL HHHHHHHHCCHHHHHHHHHHHCCCCEEEECCEEEEECCEEEECCCHHHHHHHHHHHHHHE IHVDDDAQAERVRAVLARDAHVQRIVAPAPRQIGAFGRAGLDAALRTLMEQAGIRHFEFA EECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEECC PTDEGDLLRACTEGATDA CCCCCHHHHHHHCCCCCC >Mature Secondary Structure MEGGAAVARGATPGRAASALAARRIDVKAGDFTFHATDIAFRTGALTAIVGPNGSGKSTL CCCCCCEECCCCCCHHHHHHHHHHEEEECCCEEEEEHHHEEECCCEEEEECCCCCCHHHH LEALFGFRRAQLEGATILGVPAARFMRDTRALRRFGAQLQRVEYAEHARVDEILAVHRAL HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRKQDAAVARALAIDELRAKPYSGLSKGQRQRLDLFIAFAHRPALVALDEPFTGLDRTMT HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEECCCEEEEECCCCCCHHHHHH RSVLGLLRGPLAGITIAMICHAGEELAIADDVLWVRDGTLRYQGGKDALKRRLVGEFRAL HHHHHHHHCCHHHHHHHHHHHCCCCEEEECCEEEEECCEEEECCCHHHHHHHHHHHHHHE IHVDDDAQAERVRAVLARDAHVQRIVAPAPRQIGAFGRAGLDAALRTLMEQAGIRHFEFA EECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEECC PTDEGDLLRACTEGATDA CCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA