| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is aceK
Identifier: 53718013
GI number: 53718013
Start: 402273
End: 404084
Strand: Reverse
Name: aceK
Synonym: BPSL0373
Alternate gene names: 53718013
Gene position: 404084-402273 (Counterclockwise)
Preceding gene: 53718015
Following gene: 53718012
Centisome position: 9.92
GC content: 63.91
Gene sequence:
>1812_bases ATGAATCACTTTCCCAAACTGCTGTCCTCGCAGATCGGCTTCGACGTCGCGCAGACGATCCTCGAGAACTTCGATCGCCA CTACCGGATCTTCCGCGAAGCGGCCGTCGAAGCGAAGGACCTGTTCGAGCGCGCGGACTGGCACGGGCTGCAGCGGCTCG CGCGCGAGCGCATCACGTCGTACGACGACCGCGTGCGCGAATGCGTCGAGCTGCTCGAGGACGAGTACGACGCGGAGAAC ATCGACAACGAAGTCTGGCCGCAGATCAAGCTGCATTACATCGGCCTGCTCACGTCGCACCGCCAGCCCGAATGCGCGGA GACGTTCTTCAATTCGGTGTGCTGCAAGATCCTGCACCGCGCGTACTTCAACAACGATTTCATCTTCGTGCGCCCGGCGA TCTCGACCGAATACATCGAGAACGACGAGCCCGCCGCGAAGCCCACGTACCGCGCGTACTATCCGGGCAGCGAGGGGCTC GCCGCGACGCTCGAGCGGATCGTCACGAACTTCCAGCTCAATCCGCCGTTCGAGGATCTCGAGCGCGACATCGCGTGCAT CATGCAGGCGATCCACGACGAGTTCGGCGCGTTCGACGAAGCGGTGAATTTCCAGATCCACGTGCTGTCGTCGCTGTTCT ACCGGAACAAGACCGCGTACGTCGTCGGCCGCATCATCAACGGCGACCGCGTGCTGCCGTTCGCGGTGCCGATCCGCCAC GCGCGCGCGGGCATCCTCGCGCTCGACACCGTGCTCCTGCGCCGCGACCAGTTGAAGATCATCTTCAGCTTCTCGCACTC GTATTTCCTCGTCGACATGAACGTGCCCTCCGCGTATGTGCAGTTCCTGCGCTCGATCATGCCGGGCAAGCCGAAGGCGG AGATCTACACGTCGGTCGGCCTGCAGAAGCAGGGCAAGAACCTGTTCTATCGCGACCTGCTGCATCACCTGTCGCATTCG AGCGACCGCTTCATCGTCGCGCCCGGCATCAAGGGGCTCGTGATGCTCGTGTTCACGCTGCCGTCGTTCCCGTACGTGTT CAAGATGATCAAGGATCACTTCCCGCCGCCGAAGGACACGACGCGCGAGCAGATCATGGCCAAGTACCTGCTCGTCAAGC GCCACGACCGTCTCGGCCGGATGGCCGACACGCTCGAATACTCGAGCGTCGCGCTGCCGCTCGCGCGGCTCGACGACGCG CTCGTGCGCGAGCTCGAAAAGGAAGTGCCGTCGCTGATCGAATACGAGGGCGAGAACCTCGTCATCAAGCACCTGTACAT CGAGCGCCGGATGGTGCCGCTCAACCTGTATCTGCAAAACGGCAGCGATGCCGAGATCGAGCACGGCGTGCGCGAATACG GCAATGCGGTGAAGGAGCTGATGCAGGCCAACATCTTCCCCGGCGACATGCTGTACAAGAACTTCGGCGTGACGCGCCAC GGGCGCGTCGTGTTCTACGACTACGACGAGATCGAATACCTGACCGACTGCAACGTGCGCCGCGTGCCGCCGCCGCGCAA CGACGAAGACGAGATGTCGGGCGAGCCGTGGTACACGGTCGGCCCGCACGACATCTTCCCCGAAACCTACGCGCCGTTCC TGCTCGGCGACCCGCGCGTGCGCGAGCACTTCCTCGCGCATCACGCGGATTTCTTCGATCCGCAGCTCTGGCAGGACAGC AAGGACCGCCTGCTGCGCGGCGAGCTGCCCGATTTCTTCGCCTACGAGCCGGCGCTGCGCTTTTGCATCCGCTATCCGGA GCGCTTCGCGCCGGGCGACGCGGCCGACGGCGGCAAGCTCGCCGCCGCGTGA
Upstream 100 bases:
>100_bases GGCCGCGCCCGCCGCCTGCGCCGAATCGCCCCGCGCTCGCTAAAGCGGGCCCGCGCGGCGCTAAAATGGCATGAGCTTTT CGCCCGTGAGCCCGCGCACG
Downstream 100 bases:
>100_bases GCCGCGCCCGCCCCGCGCTCGAACGCCCCTTTTTTCATCCCACTGAACCGACTTGAGATGAACAAGAACGACCATCCGCT CTCCCATCTGTTCGACAACA
Product: bifunctional isocitrate dehydrogenase kinase/phosphatase protein
Products: NA
Alternate protein names: IDH kinase/phosphatase; IDHK/P
Number of amino acids: Translated: 603; Mature: 603
Protein sequence:
>603_residues MNHFPKLLSSQIGFDVAQTILENFDRHYRIFREAAVEAKDLFERADWHGLQRLARERITSYDDRVRECVELLEDEYDAEN IDNEVWPQIKLHYIGLLTSHRQPECAETFFNSVCCKILHRAYFNNDFIFVRPAISTEYIENDEPAAKPTYRAYYPGSEGL AATLERIVTNFQLNPPFEDLERDIACIMQAIHDEFGAFDEAVNFQIHVLSSLFYRNKTAYVVGRIINGDRVLPFAVPIRH ARAGILALDTVLLRRDQLKIIFSFSHSYFLVDMNVPSAYVQFLRSIMPGKPKAEIYTSVGLQKQGKNLFYRDLLHHLSHS SDRFIVAPGIKGLVMLVFTLPSFPYVFKMIKDHFPPPKDTTREQIMAKYLLVKRHDRLGRMADTLEYSSVALPLARLDDA LVRELEKEVPSLIEYEGENLVIKHLYIERRMVPLNLYLQNGSDAEIEHGVREYGNAVKELMQANIFPGDMLYKNFGVTRH GRVVFYDYDEIEYLTDCNVRRVPPPRNDEDEMSGEPWYTVGPHDIFPETYAPFLLGDPRVREHFLAHHADFFDPQLWQDS KDRLLRGELPDFFAYEPALRFCIRYPERFAPGDAADGGKLAAA
Sequences:
>Translated_603_residues MNHFPKLLSSQIGFDVAQTILENFDRHYRIFREAAVEAKDLFERADWHGLQRLARERITSYDDRVRECVELLEDEYDAEN IDNEVWPQIKLHYIGLLTSHRQPECAETFFNSVCCKILHRAYFNNDFIFVRPAISTEYIENDEPAAKPTYRAYYPGSEGL AATLERIVTNFQLNPPFEDLERDIACIMQAIHDEFGAFDEAVNFQIHVLSSLFYRNKTAYVVGRIINGDRVLPFAVPIRH ARAGILALDTVLLRRDQLKIIFSFSHSYFLVDMNVPSAYVQFLRSIMPGKPKAEIYTSVGLQKQGKNLFYRDLLHHLSHS SDRFIVAPGIKGLVMLVFTLPSFPYVFKMIKDHFPPPKDTTREQIMAKYLLVKRHDRLGRMADTLEYSSVALPLARLDDA LVRELEKEVPSLIEYEGENLVIKHLYIERRMVPLNLYLQNGSDAEIEHGVREYGNAVKELMQANIFPGDMLYKNFGVTRH GRVVFYDYDEIEYLTDCNVRRVPPPRNDEDEMSGEPWYTVGPHDIFPETYAPFLLGDPRVREHFLAHHADFFDPQLWQDS KDRLLRGELPDFFAYEPALRFCIRYPERFAPGDAADGGKLAAA >Mature_603_residues MNHFPKLLSSQIGFDVAQTILENFDRHYRIFREAAVEAKDLFERADWHGLQRLARERITSYDDRVRECVELLEDEYDAEN IDNEVWPQIKLHYIGLLTSHRQPECAETFFNSVCCKILHRAYFNNDFIFVRPAISTEYIENDEPAAKPTYRAYYPGSEGL AATLERIVTNFQLNPPFEDLERDIACIMQAIHDEFGAFDEAVNFQIHVLSSLFYRNKTAYVVGRIINGDRVLPFAVPIRH ARAGILALDTVLLRRDQLKIIFSFSHSYFLVDMNVPSAYVQFLRSIMPGKPKAEIYTSVGLQKQGKNLFYRDLLHHLSHS SDRFIVAPGIKGLVMLVFTLPSFPYVFKMIKDHFPPPKDTTREQIMAKYLLVKRHDRLGRMADTLEYSSVALPLARLDDA LVRELEKEVPSLIEYEGENLVIKHLYIERRMVPLNLYLQNGSDAEIEHGVREYGNAVKELMQANIFPGDMLYKNFGVTRH GRVVFYDYDEIEYLTDCNVRRVPPPRNDEDEMSGEPWYTVGPHDIFPETYAPFLLGDPRVREHFLAHHADFFDPQLWQDS KDRLLRGELPDFFAYEPALRFCIRYPERFAPGDAADGGKLAAA
Specific function: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source
COG id: COG4579
COG function: function code T; Isocitrate dehydrogenase kinase/phosphatase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AceK family
Homologues:
Organism=Escherichia coli, GI1790446, Length=572, Percent_Identity=42.1328671328671, Blast_Score=463, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACEK_BURM7 (A3MNH1)
Other databases:
- EMBL: CP000548 - RefSeq: YP_001081807.1 - GeneID: 4894218 - GenomeReviews: CP000548_GR - KEGG: bmn:BMA10247_2279 - TIGR: BMA10247_2279 - HOGENOM: HBG298593 - OMA: RMTPLNI - ProtClustDB: PRK02946 - BioCyc: BMAL320389:BMA10247_2279-MONOMER - GO: GO:0005737 - HAMAP: MF_00747 - InterPro: IPR010452 - PIRSF: PIRSF000719 - ProDom: PD043552
Pfam domain/function: PF06315 AceK
EC number: =2.7.11.5
Molecular weight: Translated: 69894; Mature: 69894
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: ACT_SITE 383-383 BINDING 348-348
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHFPKLLSSQIGFDVAQTILENFDRHYRIFREAAVEAKDLFERADWHGLQRLARERITS CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YDDRVRECVELLEDEYDAENIDNEVWPQIKLHYIGLLTSHRQPECAETFFNSVCCKILHR HHHHHHHHHHHHHHHCCHHCCCCHHCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHH AYFNNDFIFVRPAISTEYIENDEPAAKPTYRAYYPGSEGLAATLERIVTNFQLNPPFEDL HHCCCCEEEEECCCCHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHH ERDIACIMQAIHDEFGAFDEAVNFQIHVLSSLFYRNKTAYVVGRIINGDRVLPFAVPIRH HHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEHHHHH ARAGILALDTVLLRRDQLKIIFSFSHSYFLVDMNVPSAYVQFLRSIMPGKPKAEIYTSVG HHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHCC LQKQGKNLFYRDLLHHLSHSSDRFIVAPGIKGLVMLVFTLPSFPYVFKMIKDHFPPPKDT CHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC TREQIMAKYLLVKRHDRLGRMADTLEYSSVALPLARLDDALVRELEKEVPSLIEYEGENL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VIKHLYIERRMVPLNLYLQNGSDAEIEHGVREYGNAVKELMQANIFPGDMLYKNFGVTRH EEEEEEHHCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC GRVVFYDYDEIEYLTDCNVRRVPPPRNDEDEMSGEPWYTVGPHDIFPETYAPFLLGDPRV CEEEEEECCCHHHHHCCCCCCCCCCCCCCHHCCCCCCEECCCHHCCCCCCCCCCCCCHHH REHFLAHHADFFDPQLWQDSKDRLLRGELPDFFAYEPALRFCIRYPERFAPGDAADGGKL HHHHHHHHCCCCCCHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCC AAA CCC >Mature Secondary Structure MNHFPKLLSSQIGFDVAQTILENFDRHYRIFREAAVEAKDLFERADWHGLQRLARERITS CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YDDRVRECVELLEDEYDAENIDNEVWPQIKLHYIGLLTSHRQPECAETFFNSVCCKILHR HHHHHHHHHHHHHHHCCHHCCCCHHCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHH AYFNNDFIFVRPAISTEYIENDEPAAKPTYRAYYPGSEGLAATLERIVTNFQLNPPFEDL HHCCCCEEEEECCCCHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHH ERDIACIMQAIHDEFGAFDEAVNFQIHVLSSLFYRNKTAYVVGRIINGDRVLPFAVPIRH HHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEHHHHH ARAGILALDTVLLRRDQLKIIFSFSHSYFLVDMNVPSAYVQFLRSIMPGKPKAEIYTSVG HHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHCC LQKQGKNLFYRDLLHHLSHSSDRFIVAPGIKGLVMLVFTLPSFPYVFKMIKDHFPPPKDT CHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC TREQIMAKYLLVKRHDRLGRMADTLEYSSVALPLARLDDALVRELEKEVPSLIEYEGENL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VIKHLYIERRMVPLNLYLQNGSDAEIEHGVREYGNAVKELMQANIFPGDMLYKNFGVTRH EEEEEEHHCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC GRVVFYDYDEIEYLTDCNVRRVPPPRNDEDEMSGEPWYTVGPHDIFPETYAPFLLGDPRV CEEEEEECCCHHHHHCCCCCCCCCCCCCCHHCCCCCCEECCCHHCCCCCCCCCCCCCHHH REHFLAHHADFFDPQLWQDSKDRLLRGELPDFFAYEPALRFCIRYPERFAPGDAADGGKL HHHHHHHHCCCCCCHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCC AAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA