| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is can [H]
Identifier: 53718012
GI number: 53718012
Start: 401445
End: 402215
Strand: Reverse
Name: can [H]
Synonym: BPSL0372
Alternate gene names: 53718012
Gene position: 402215-401445 (Counterclockwise)
Preceding gene: 53718013
Following gene: 53718011
Centisome position: 9.87
GC content: 66.15
Gene sequence:
>771_bases ATGAACAAGAACGACCATCCGCTCTCCCATCTGTTCGACAACAACGACGCCTGGGTCAAGCGCAAGCTCGCCGACGACCC GCAATACTTCTCGCGCCTCGCCGATCAGCAGGCGCCCGAATATCTCTGGATCGGCTGCTCCGATTCGCGCGTGCCCGCGA ACCAGATCATCGGCCTGCCGCCGGGCGAAGTGTTCGTCCATCGCAACATCGCGAACGTCGTCGTGCACACCGATCTGAAC TGCCTGTCGGTGATCCAGTTCGCGGTCGACCTGCTGAAGGTCAAGCACGTCATGGTCGTCGGCCACTACGGCTGCTCGGG CGTGAACGCGGCGCTGCACAACCGCCGCGTCGGGCTCGCGGACAACTGGCTGCACCACGTGCAGGACGTGCGCGAAAAGC ACGCGGCGCTGCTCGAGGACTGGCCGCTCGGCGAAGCGCGCTACCGGCGGCTGATCGAGCTCAACGCGATCGAGCAGGTG GTCAACGTGTGCCGCACGACGATCGTCAACGACGCGTGGGCGCGCGGCCAGCCGCTTACCGTGCACGCGCTCGTGTACGG CGTGCACGACGGCCGGATGCGCAATCTCGGGATGGCCGTGTCGCATGCCGAGCAGCTCGATGCGACGTACCGCCGCGCGG TCGCCGCGCTTTCGGCAAGCGGCGCGCATTCGGCGGACAATGACGTCGTGGCGGCCGACGCGGCGCAACTCGCCGGCGCG GTCGATCTCATTGCCCAAACCATCAAGGAGACGAAACATGACGGCTGTTGA
Upstream 100 bases:
>100_bases GCCGGGCGACGCGGCCGACGGCGGCAAGCTCGCCGCCGCGTGAGCCGCGCCCGCCCCGCGCTCGAACGCCCCTTTTTTCA TCCCACTGAACCGACTTGAG
Downstream 100 bases:
>100_bases TCAGGATCCGATCGTCATCGCATCGGCGGCGCGCACGCCGATCGCGGGCTTTCAGGGCGAGTTCGCGTCGCTCGCCGCGC CGCAGCTGGGCGCGGCCGCG
Product: putative carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase 2 [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MNKNDHPLSHLFDNNDAWVKRKLADDPQYFSRLADQQAPEYLWIGCSDSRVPANQIIGLPPGEVFVHRNIANVVVHTDLN CLSVIQFAVDLLKVKHVMVVGHYGCSGVNAALHNRRVGLADNWLHHVQDVREKHAALLEDWPLGEARYRRLIELNAIEQV VNVCRTTIVNDAWARGQPLTVHALVYGVHDGRMRNLGMAVSHAEQLDATYRRAVAALSASGAHSADNDVVAADAAQLAGA VDLIAQTIKETKHDGC
Sequences:
>Translated_256_residues MNKNDHPLSHLFDNNDAWVKRKLADDPQYFSRLADQQAPEYLWIGCSDSRVPANQIIGLPPGEVFVHRNIANVVVHTDLN CLSVIQFAVDLLKVKHVMVVGHYGCSGVNAALHNRRVGLADNWLHHVQDVREKHAALLEDWPLGEARYRRLIELNAIEQV VNVCRTTIVNDAWARGQPLTVHALVYGVHDGRMRNLGMAVSHAEQLDATYRRAVAALSASGAHSADNDVVAADAAQLAGA VDLIAQTIKETKHDGC >Mature_256_residues MNKNDHPLSHLFDNNDAWVKRKLADDPQYFSRLADQQAPEYLWIGCSDSRVPANQIIGLPPGEVFVHRNIANVVVHTDLN CLSVIQFAVDLLKVKHVMVVGHYGCSGVNAALHNRRVGLADNWLHHVQDVREKHAALLEDWPLGEARYRRLIELNAIEQV VNVCRTTIVNDAWARGQPLTVHALVYGVHDGRMRNLGMAVSHAEQLDATYRRAVAALSASGAHSADNDVVAADAAQLAGA VDLIAQTIKETKHDGC
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786318, Length=212, Percent_Identity=50.4716981132076, Blast_Score=238, Evalue=3e-64, Organism=Escherichia coli, GI1786534, Length=205, Percent_Identity=26.3414634146341, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324292, Length=191, Percent_Identity=29.3193717277487, Blast_Score=84, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 28230; Mature: 28230
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNDHPLSHLFDNNDAWVKRKLADDPQYFSRLADQQAPEYLWIGCSDSRVPANQIIGLP CCCCCCCHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHEECCC PGEVFVHRNIANVVVHTDLNCLSVIQFAVDLLKVKHVMVVGHYGCSGVNAALHNRRVGLA CCCEEEECCHHHEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCH DNWLHHVQDVREKHAALLEDWPLGEARYRRLIELNAIEQVVNVCRTTIVNDAWARGQPLT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEE VHALVYGVHDGRMRNLGMAVSHAEQLDATYRRAVAALSASGAHSADNDVVAADAAQLAGA EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHH VDLIAQTIKETKHDGC HHHHHHHHHHHCCCCC >Mature Secondary Structure MNKNDHPLSHLFDNNDAWVKRKLADDPQYFSRLADQQAPEYLWIGCSDSRVPANQIIGLP CCCCCCCHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHEECCC PGEVFVHRNIANVVVHTDLNCLSVIQFAVDLLKVKHVMVVGHYGCSGVNAALHNRRVGLA CCCEEEECCHHHEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCH DNWLHHVQDVREKHAALLEDWPLGEARYRRLIELNAIEQVVNVCRTTIVNDAWARGQPLT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEE VHALVYGVHDGRMRNLGMAVSHAEQLDATYRRAVAALSASGAHSADNDVVAADAAQLAGA EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHH VDLIAQTIKETKHDGC HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503; 10493123 [H]