| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53717986
Identifier: 53717986
GI number: 53717986
Start: 365609
End: 368338
Strand: Reverse
Name: 53717986
Synonym: BPSL0345
Alternate gene names: NA
Gene position: 368338-365609 (Counterclockwise)
Preceding gene: 53717987
Following gene: 53717985
Centisome position: 9.04
GC content: 63.63
Gene sequence:
>2730_bases ATGAAAAAGCGCGAAGAAAAGTCGCTGTCGGTCAGCCACTCGCGTCGAGCATTTCTCGTTTGGGTTCCGGCCTCGCTGTT GGTGACGGCTTGCGGCGGAGACAACGGCAGCTCCGCTCCGGCGTCCATCAAGAAAGCCGTCGCCGCGCTGACGGGCCCTG GCGGAGCGACGTGGACCGGGATGGGCAAGGGCGGGATTCTCATCCAGTCGCCCTACTCGGGCGCCGGCAATTTCGAGCTT CTCGCCGGCGATGAATATGGCATGTTGCACTGCCTGCGACGCACGAACGACAACGGCGCCCAATGGATGGTCGCCGTCGG CGACGGGATGGGATCGAAGAACAGCGTCTCCGGTTATTGCCACACGTACAGCACGAACTACACGAACATCGAAGCCGCGG TCGTCGATGACGGCGCGGTCAAAACATACTTCCGGAGCAATAGCACGCCGTGGTCGGCTCACAAGACGATATCGATCGGC GACGCGCAAGGCTTCCCCGCCTATCTCCAATCGAATCGCAACGGCGCGCAGCAGCTCGAACTGGTGGTGGGCATGCGCCG CGGCGGCATGGTCCATTATTGGAGAGACGACAAGGACGGCTTCACGTGGAAGCAATCGAGCATCTTCGGCAGCGGCCAGG TGAAGGGCGTGTCCGTCATGCAAGGCAACTACATCGGGCCCGACAACAACGCCAATCTCGAACTGGTCGCATGGGTGGAC GATCGTCTGGAGTCCTGGTGTTGCGAGGGGCGCGCGTGGAGAAAAATCTGCAACATCGCCGCCGGAGGCGTCGGGGGCGC GCCCGCACTGCTTCAGAGCAATTACGGAACCAAAGGGAATTTCGAGGTTCTCGTGCCGCTCGCCACGGGCGGCATCGCTC ACTACTGGCGCAACAACGATGCCGAAGGCATCCCTTGGAGCTTCACCGGCACGATCGGCACGGGCGCCTATGTCGCCGCC GGCCTGCTCCAGTCGCAGAACGGCGTCAAAGGAGACTTCGAGGCGATCGGGCTGCGCGCCTCCGGCAAGGCCGATGTTTT CAGGCGCGGCGATACGCTCGTCTGGGAAAACAGCGCGACCGTCTCGCCGTTCTCCGAGGGCACGGCGGCCGACGTCGGCG TTTCGTCTCACATCGTCGACGTCAACGTCACCGGCATCAATTCCGTGCTCCTGAAGAACGGCAGCGTGCTGATGTTCGGC TACTACAAGGGCGGCTCCACGAACAAGACCATTCCGGCATGCATCTGGAATCCGGTCAACGACCAGATCACCGCCATCCC GTCCTTCCGAAACAATTTCTGCGCGGGACAAACCGCCATGCCCGACGGAAAAGTGCTGATCGTCGGCGGCCACATCGGCG ATACGTTGAAGGACGTCGTGGTTTTCGATCCCGACAACCACACCGCCACGCTCGTCGCCACGATGACGAAGGGGCGCTGG TACCCATCGACCGCCACGTTGCCCGACGGGCAGGTGTTCATCATCAGCGGAACGGAAACGGCGGGCTGGAACACCTCGGT CAACGACACCTGGCAGACGTATGCGAACAACGCGCTGACAGCGCCGGAAGACGTGATCTCGCCCTTCTCGCCCTATTACC CGAAATCGCAAACGCAGATCGACCTGTACCCGTTTCTCTTCGTTCTGCCGGACGGCAAACTGCTCGTTCACGCGAGAAAC ACGACGCGCTTTTTCGACATCGGAACCCGATCGTGGAGCGCGACGCTTTACAAGACCGTTTCCGACAACAGCCGCACCTA TCCATTCATGGGCGGGACGGCCGTGCTCCCGTTGAGGCCTTCGGAGAACTACAGAGTCAAGGTCGTCGTCGCCGGCGGCG CGGACAAGTCGGCTCAGATCGCCATCGGCGACGATAGCCAGTACGACAACAGCGTGCCCGGCATGACGAGCTGCGAGATG CTCGATCTCGGAGACGCCGCGCCCGCGTGGAAAGCCATCGCGCCCCTCAATGAAGGGCGGGTCATGTGCGACCTCGTCAC GCTGCCGGACGGCAAGCTGTTCATCGTCGGCGGCAACAAAACGGGCAAGGCCGACTACGGGCGCGGGCCGACCTATCGGC CCGAGCTCTATGATCCGCAGACGAACACGTGGACGTTGCTCGCGTCCACGCGCATCGCCCGGGGCTATCACGCCACCGCG CTGCTGCTGCCCGACGGCCGGATCGCCATCACGGGCAAGGACGGCGACTATCAAGGCTCGGGGCTTCAGTATGCCGAGAC GCGCGTCGAGATCTTTTCGCCGCCCTATCTCTTCAAGGGGCCGCGGCCGGCGATCCAGTCGGCCCCCGCTTCGATCAACC ACGGCGGCAGCTTTACCCTCGGCCTGTCGAGCGGCACCAGTCCGGAGGACATCGGCTCGATCGTGATCGTCGCGTGCGGC TCCGCCACGCATCAGATCAATTTCTCGCATCGAATCGTGGAGCTCGTTTTCGCCGTATCGGGCGGCGCGCTGACCGTGAA CGCGCCGCCGAACGCGAATATCGCGCCGCCCGGCTATTACATGATGTTCGTGTTGAGCAAGCTCGGCGTCCCCAGTGTGT CGTCGATCGTGCACGTCGCCGCCGGTTCGGCGCAAGCGGCCTCCGCCACGCCCGAGGCACTGACCCGGCAGCCGCGCGTC GCGACCGTCTCGATCGAACAGGCCGGTGACGCGCCCCGGTGCGCGCCGCTGACCGTCGCGGAAAAGCAGTCGATCAACGG CATGGGCTGA
Upstream 100 bases:
>100_bases TCGAGTTCGCTCTCCGGCATTCAAAAGAAAGACGCAATTCAAGCGCTTCCAATGGGAAAAAGCGCGCGATCGTTCACCAT TTCGATACATGGAGATCAAC
Downstream 100 bases:
>100_bases CGGAGGATCACGATGAACGAAACAAGCATGATGCGGCGAAAGGCGTTGGGCGCGTTATGTTCACTCGCCCTTGCCGGGGC ACCGGTCGGATCGCGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Galactose Oxidase; Kelch Domain-Containing Protein; Kelch Domain Protein; Peptidase C1A; NHL Repeat Containing Protein; Arabinogalactan Endo-1 4-Beta-Galactosidase; Kelch Repeat-Containing Protein; Kelch Motif-Containing Protein; Kelch Domain Containing Protein; Exported Oxidase; Lectin Repeat-Containing Protein
Number of amino acids: Translated: 909; Mature: 909
Protein sequence:
>909_residues MKKREEKSLSVSHSRRAFLVWVPASLLVTACGGDNGSSAPASIKKAVAALTGPGGATWTGMGKGGILIQSPYSGAGNFEL LAGDEYGMLHCLRRTNDNGAQWMVAVGDGMGSKNSVSGYCHTYSTNYTNIEAAVVDDGAVKTYFRSNSTPWSAHKTISIG DAQGFPAYLQSNRNGAQQLELVVGMRRGGMVHYWRDDKDGFTWKQSSIFGSGQVKGVSVMQGNYIGPDNNANLELVAWVD DRLESWCCEGRAWRKICNIAAGGVGGAPALLQSNYGTKGNFEVLVPLATGGIAHYWRNNDAEGIPWSFTGTIGTGAYVAA GLLQSQNGVKGDFEAIGLRASGKADVFRRGDTLVWENSATVSPFSEGTAADVGVSSHIVDVNVTGINSVLLKNGSVLMFG YYKGGSTNKTIPACIWNPVNDQITAIPSFRNNFCAGQTAMPDGKVLIVGGHIGDTLKDVVVFDPDNHTATLVATMTKGRW YPSTATLPDGQVFIISGTETAGWNTSVNDTWQTYANNALTAPEDVISPFSPYYPKSQTQIDLYPFLFVLPDGKLLVHARN TTRFFDIGTRSWSATLYKTVSDNSRTYPFMGGTAVLPLRPSENYRVKVVVAGGADKSAQIAIGDDSQYDNSVPGMTSCEM LDLGDAAPAWKAIAPLNEGRVMCDLVTLPDGKLFIVGGNKTGKADYGRGPTYRPELYDPQTNTWTLLASTRIARGYHATA LLLPDGRIAITGKDGDYQGSGLQYAETRVEIFSPPYLFKGPRPAIQSAPASINHGGSFTLGLSSGTSPEDIGSIVIVACG SATHQINFSHRIVELVFAVSGGALTVNAPPNANIAPPGYYMMFVLSKLGVPSVSSIVHVAAGSAQAASATPEALTRQPRV ATVSIEQAGDAPRCAPLTVAEKQSINGMG
Sequences:
>Translated_909_residues MKKREEKSLSVSHSRRAFLVWVPASLLVTACGGDNGSSAPASIKKAVAALTGPGGATWTGMGKGGILIQSPYSGAGNFEL LAGDEYGMLHCLRRTNDNGAQWMVAVGDGMGSKNSVSGYCHTYSTNYTNIEAAVVDDGAVKTYFRSNSTPWSAHKTISIG DAQGFPAYLQSNRNGAQQLELVVGMRRGGMVHYWRDDKDGFTWKQSSIFGSGQVKGVSVMQGNYIGPDNNANLELVAWVD DRLESWCCEGRAWRKICNIAAGGVGGAPALLQSNYGTKGNFEVLVPLATGGIAHYWRNNDAEGIPWSFTGTIGTGAYVAA GLLQSQNGVKGDFEAIGLRASGKADVFRRGDTLVWENSATVSPFSEGTAADVGVSSHIVDVNVTGINSVLLKNGSVLMFG YYKGGSTNKTIPACIWNPVNDQITAIPSFRNNFCAGQTAMPDGKVLIVGGHIGDTLKDVVVFDPDNHTATLVATMTKGRW YPSTATLPDGQVFIISGTETAGWNTSVNDTWQTYANNALTAPEDVISPFSPYYPKSQTQIDLYPFLFVLPDGKLLVHARN TTRFFDIGTRSWSATLYKTVSDNSRTYPFMGGTAVLPLRPSENYRVKVVVAGGADKSAQIAIGDDSQYDNSVPGMTSCEM LDLGDAAPAWKAIAPLNEGRVMCDLVTLPDGKLFIVGGNKTGKADYGRGPTYRPELYDPQTNTWTLLASTRIARGYHATA LLLPDGRIAITGKDGDYQGSGLQYAETRVEIFSPPYLFKGPRPAIQSAPASINHGGSFTLGLSSGTSPEDIGSIVIVACG SATHQINFSHRIVELVFAVSGGALTVNAPPNANIAPPGYYMMFVLSKLGVPSVSSIVHVAAGSAQAASATPEALTRQPRV ATVSIEQAGDAPRCAPLTVAEKQSINGMG >Mature_909_residues MKKREEKSLSVSHSRRAFLVWVPASLLVTACGGDNGSSAPASIKKAVAALTGPGGATWTGMGKGGILIQSPYSGAGNFEL LAGDEYGMLHCLRRTNDNGAQWMVAVGDGMGSKNSVSGYCHTYSTNYTNIEAAVVDDGAVKTYFRSNSTPWSAHKTISIG DAQGFPAYLQSNRNGAQQLELVVGMRRGGMVHYWRDDKDGFTWKQSSIFGSGQVKGVSVMQGNYIGPDNNANLELVAWVD DRLESWCCEGRAWRKICNIAAGGVGGAPALLQSNYGTKGNFEVLVPLATGGIAHYWRNNDAEGIPWSFTGTIGTGAYVAA GLLQSQNGVKGDFEAIGLRASGKADVFRRGDTLVWENSATVSPFSEGTAADVGVSSHIVDVNVTGINSVLLKNGSVLMFG YYKGGSTNKTIPACIWNPVNDQITAIPSFRNNFCAGQTAMPDGKVLIVGGHIGDTLKDVVVFDPDNHTATLVATMTKGRW YPSTATLPDGQVFIISGTETAGWNTSVNDTWQTYANNALTAPEDVISPFSPYYPKSQTQIDLYPFLFVLPDGKLLVHARN TTRFFDIGTRSWSATLYKTVSDNSRTYPFMGGTAVLPLRPSENYRVKVVVAGGADKSAQIAIGDDSQYDNSVPGMTSCEM LDLGDAAPAWKAIAPLNEGRVMCDLVTLPDGKLFIVGGNKTGKADYGRGPTYRPELYDPQTNTWTLLASTRIARGYHATA LLLPDGRIAITGKDGDYQGSGLQYAETRVEIFSPPYLFKGPRPAIQSAPASINHGGSFTLGLSSGTSPEDIGSIVIVACG SATHQINFSHRIVELVFAVSGGALTVNAPPNANIAPPGYYMMFVLSKLGVPSVSSIVHVAAGSAQAASATPEALTRQPRV ATVSIEQAGDAPRCAPLTVAEKQSINGMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96387; Mature: 96387
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKREEKSLSVSHSRRAFLVWVPASLLVTACGGDNGSSAPASIKKAVAALTGPGGATWTG CCCCCCCCCEECCCCCEEEEEECHHHEEEEECCCCCCCCCHHHHHHHHHEECCCCCEEEE MGKGGILIQSPYSGAGNFELLAGDEYGMLHCLRRTNDNGAQWMVAVGDGMGSKNSVSGYC CCCCCEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEE HTYSTNYTNIEAAVVDDGAVKTYFRSNSTPWSAHKTISIGDAQGFPAYLQSNRNGAQQLE EEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHCCCCCHHHEE LVVGMRRGGMVHYWRDDKDGFTWKQSSIFGSGQVKGVSVMQGNYIGPDNNANLELVAWVD EEEECCCCCEEEEEECCCCCCEEEECEECCCCCEEEEEEEECCEECCCCCCCEEEEEEEH DRLESWCCEGRAWRKICNIAAGGVGGAPALLQSNYGTKGNFEVLVPLATGGIAHYWRNND HHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEEEECCCEEEECCCCC AEGIPWSFTGTIGTGAYVAAGLLQSQNGVKGDFEAIGLRASGKADVFRRGDTLVWENSAT CCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEECCCEEEEECCCC VSPFSEGTAADVGVSSHIVDVNVTGINSVLLKNGSVLMFGYYKGGSTNKTIPACIWNPVN CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCEEEEEEECCCCCCCCCCEEEECCCC DQITAIPSFRNNFCAGQTAMPDGKVLIVGGHIGDTLKDVVVFDPDNHTATLVATMTKGRW CCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEEEEEEECCEE YPSTATLPDGQVFIISGTETAGWNTSVNDTWQTYANNALTAPEDVISPFSPYYPKSQTQI CCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCEE DLYPFLFVLPDGKLLVHARNTTRFFDIGTRSWSATLYKTVSDNSRTYPFMGGTAVLPLRP EEEEEEEEECCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCEEECCEEEEEECC SENYRVKVVVAGGADKSAQIAIGDDSQYDNSVPGMTSCEMLDLGDAAPAWKAIAPLNEGR CCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCE VMCDLVTLPDGKLFIVGGNKTGKADYGRGPTYRPELYDPQTNTWTLLASTRIARGYHATA EEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEECCCCCEEE LLLPDGRIAITGKDGDYQGSGLQYAETRVEIFSPPYLFKGPRPAIQSAPASINHGGSFTL EEECCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCEECCCCHHHHCCCCCCCCCCEEEE GLSSGTSPEDIGSIVIVACGSATHQINFSHRIVELVFAVSGGALTVNAPPNANIAPPGYY EECCCCCHHHCCCEEEEEECCCEEEECCHHHEEEEEEEECCCEEEECCCCCCCCCCCCHH MMFVLSKLGVPSVSSIVHVAAGSAQAASATPEALTRQPRVATVSIEQAGDAPRCAPLTVA HHHHHHHCCCCCHHHEEEEECCCCCCCCCCHHHHCCCCCEEEEEEHHCCCCCCCCEEEEE EKQSINGMG CCCCCCCCC >Mature Secondary Structure MKKREEKSLSVSHSRRAFLVWVPASLLVTACGGDNGSSAPASIKKAVAALTGPGGATWTG CCCCCCCCCEECCCCCEEEEEECHHHEEEEECCCCCCCCCHHHHHHHHHEECCCCCEEEE MGKGGILIQSPYSGAGNFELLAGDEYGMLHCLRRTNDNGAQWMVAVGDGMGSKNSVSGYC CCCCCEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEE HTYSTNYTNIEAAVVDDGAVKTYFRSNSTPWSAHKTISIGDAQGFPAYLQSNRNGAQQLE EEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHCCCCCHHHEE LVVGMRRGGMVHYWRDDKDGFTWKQSSIFGSGQVKGVSVMQGNYIGPDNNANLELVAWVD EEEECCCCCEEEEEECCCCCCEEEECEECCCCCEEEEEEEECCEECCCCCCCEEEEEEEH DRLESWCCEGRAWRKICNIAAGGVGGAPALLQSNYGTKGNFEVLVPLATGGIAHYWRNND HHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEEEECCCEEEECCCCC AEGIPWSFTGTIGTGAYVAAGLLQSQNGVKGDFEAIGLRASGKADVFRRGDTLVWENSAT CCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEECCCEEEEECCCC VSPFSEGTAADVGVSSHIVDVNVTGINSVLLKNGSVLMFGYYKGGSTNKTIPACIWNPVN CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCEEEEEEECCCCCCCCCCEEEECCCC DQITAIPSFRNNFCAGQTAMPDGKVLIVGGHIGDTLKDVVVFDPDNHTATLVATMTKGRW CCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEEEEEEECCEE YPSTATLPDGQVFIISGTETAGWNTSVNDTWQTYANNALTAPEDVISPFSPYYPKSQTQI CCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCEE DLYPFLFVLPDGKLLVHARNTTRFFDIGTRSWSATLYKTVSDNSRTYPFMGGTAVLPLRP EEEEEEEEECCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCEEECCEEEEEECC SENYRVKVVVAGGADKSAQIAIGDDSQYDNSVPGMTSCEMLDLGDAAPAWKAIAPLNEGR CCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCE VMCDLVTLPDGKLFIVGGNKTGKADYGRGPTYRPELYDPQTNTWTLLASTRIARGYHATA EEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEECCCCCEEE LLLPDGRIAITGKDGDYQGSGLQYAETRVEIFSPPYLFKGPRPAIQSAPASINHGGSFTL EEECCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCEECCCCHHHHCCCCCCCCCCEEEE GLSSGTSPEDIGSIVIVACGSATHQINFSHRIVELVFAVSGGALTVNAPPNANIAPPGYY EECCCCCHHHCCCEEEEEECCCEEEECCHHHEEEEEEEECCCEEEECCCCCCCCCCCCHH MMFVLSKLGVPSVSSIVHVAAGSAQAASATPEALTRQPRVATVSIEQAGDAPRCAPLTVA HHHHHHHCCCCCHHHEEEEECCCCCCCCCCHHHHCCCCCEEEEEEHHCCCCCCCCEEEEE EKQSINGMG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA