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The map label for this gene is 53717985

Identifier: 53717985

GI number: 53717985

Start: 364988

End: 365581

Strand: Reverse

Name: 53717985

Synonym: BPSL0344

Alternate gene names: NA

Gene position: 365581-364988 (Counterclockwise)

Preceding gene: 53717986

Following gene: 53717981

Centisome position: 8.97

GC content: 61.78

Gene sequence:

>594_bases
ATGATGCGGCGAAAGGCGTTGGGCGCGTTATGTTCACTCGCCCTTGCCGGGGCACCGGTCGGATCGCGGGCGGCCACGCC
GTTCTATTCGTTGCCGCTGAGCAGCAAGGACTGGCACAAGGGATTCCGGCTAACGGATCTGCACGGCCATACGAAGACGC
CGCAAGACTATCGGGGCAACGTACTCCTGCTCTTCTTCGGCTTCCTCAGTTGTCCGAGCATCTGCTCGACCACCATGCTC
GAACTGACGCAGGCGAAGGAACGCGTCGGCGCGCAAAAGGACAAGGTCAAGATTCTCTTCGTCACCCTGGACCCGAATCG
CGACACCTCGCCGACCATCGCCCGCTGGCTCGCCAGTTTCGGCGACGACAACATCGGGCTGCGCGATAGCGAGGCACATG
TTCGGAAGGCGGCCACCGCGTTGAACCTGAAATACGAGCGCGTCGAAGGAGACGTTCCCGGTGCCTATACGATCGACCAC
GGCGTTCAGACGTATGTGTTCGATCCGCAAGGGCGATTGCGCTTGATCGCCCGAGCCGGCATCGAGCCCGAGTACGTGGC
GAAAGACATCGTTCAGCTGCTTTCCGGCCGCTAG

Upstream 100 bases:

>100_bases
ACAGGCCGGTGACGCGCCCCGGTGCGCGCCGCTGACCGTCGCGGAAAAGCAGTCGATCAACGGCATGGGCTGACGGAGGA
TCACGATGAACGAAACAAGC

Downstream 100 bases:

>100_bases
AAGAACACGCGGCTGTTCGCGCCGGGCACGTTGCAAAAGGCAGCTCGCCGAAAGCGTACCGGGCGCGCACGCGCGCGGCG
CGCCAGGCGGACATGCAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MMRRKALGALCSLALAGAPVGSRAATPFYSLPLSSKDWHKGFRLTDLHGHTKTPQDYRGNVLLLFFGFLSCPSICSTTML
ELTQAKERVGAQKDKVKILFVTLDPNRDTSPTIARWLASFGDDNIGLRDSEAHVRKAATALNLKYERVEGDVPGAYTIDH
GVQTYVFDPQGRLRLIARAGIEPEYVAKDIVQLLSGR

Sequences:

>Translated_197_residues
MMRRKALGALCSLALAGAPVGSRAATPFYSLPLSSKDWHKGFRLTDLHGHTKTPQDYRGNVLLLFFGFLSCPSICSTTML
ELTQAKERVGAQKDKVKILFVTLDPNRDTSPTIARWLASFGDDNIGLRDSEAHVRKAATALNLKYERVEGDVPGAYTIDH
GVQTYVFDPQGRLRLIARAGIEPEYVAKDIVQLLSGR
>Mature_197_residues
MMRRKALGALCSLALAGAPVGSRAATPFYSLPLSSKDWHKGFRLTDLHGHTKTPQDYRGNVLLLFFGFLSCPSICSTTML
ELTQAKERVGAQKDKVKILFVTLDPNRDTSPTIARWLASFGDDNIGLRDSEAHVRKAATALNLKYERVEGDVPGAYTIDH
GVQTYVFDPQGRLRLIARAGIEPEYVAKDIVQLLSGR

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=132, Percent_Identity=31.0606060606061, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI281182722, Length=132, Percent_Identity=31.0606060606061, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI281182716, Length=132, Percent_Identity=31.0606060606061, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI153791313, Length=132, Percent_Identity=31.0606060606061, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI4759068, Length=134, Percent_Identity=30.5970149253731, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17531419, Length=140, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6319498, Length=135, Percent_Identity=31.1111111111111, Blast_Score=74, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6319511, Length=137, Percent_Identity=27.7372262773723, Blast_Score=69, Evalue=5e-13,
Organism=Drosophila melanogaster, GI19920710, Length=134, Percent_Identity=27.6119402985075, Blast_Score=80, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 21718; Mature: 21718

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRKALGALCSLALAGAPVGSRAATPFYSLPLSSKDWHKGFRLTDLHGHTKTPQDYRGN
CCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHCCCEEEECCCCCCCCCCCCCC
VLLLFFGFLSCPSICSTTMLELTQAKERVGAQKDKVKILFVTLDPNRDTSPTIARWLASF
EEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHH
GDDNIGLRDSEAHVRKAATALNLKYERVEGDVPGAYTIDHGVQTYVFDPQGRLRLIARAG
CCCCCCCCCCHHHHHHHHHHHCEEEEECCCCCCCCEEECCCCEEEEECCCCCEEEEECCC
IEPEYVAKDIVQLLSGR
CCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMRRKALGALCSLALAGAPVGSRAATPFYSLPLSSKDWHKGFRLTDLHGHTKTPQDYRGN
CCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHCCCEEEECCCCCCCCCCCCCC
VLLLFFGFLSCPSICSTTMLELTQAKERVGAQKDKVKILFVTLDPNRDTSPTIARWLASF
EEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHH
GDDNIGLRDSEAHVRKAATALNLKYERVEGDVPGAYTIDHGVQTYVFDPQGRLRLIARAG
CCCCCCCCCCHHHHHHHHHHHCEEEEECCCCCCCCEEECCCCEEEEECCCCCEEEEECCC
IEPEYVAKDIVQLLSGR
CCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA