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The map label for this gene is lrp [H]

Identifier: 53717981

GI number: 53717981

Start: 362184

End: 362642

Strand: Reverse

Name: lrp [H]

Synonym: BPSL0340

Alternate gene names: 53717981

Gene position: 362642-362184 (Counterclockwise)

Preceding gene: 53717985

Following gene: 53717980

Centisome position: 8.9

GC content: 65.36

Gene sequence:

>459_bases
ATGAAGCTCGACTCTATCGATCGGCGCATCCTGCGGGCGCTGCAACGCGACGGCCGGCAGCAGAACGTCGAACTCGCGAA
GGAAGTCGGCCTGTCGCCTTCGCCGTGCCTGAGGCGCGTGCGGCTGCTCGAGGAAGCCGGCGTGATCGAGCGGTACGTCG
CGGTGCTCAATCCCGCGAAGGTCGGCCGCGGGCTGACCGTGTTCACGCGGGTCTGGCTGAAAGAACAAGACGCGGACACC
GTCGCTCACTTCGCCGAAGCGGTCCAGCACCTGCCGCAGGTGGTCGAGTGCCATCTGATGGCGGGCGACTGCGATTTCCT
GCTGCGCGTGGTGGCGGCCGACATCGACGACTATCGGCAGTTCCAGATGCAGCACCTGACGCGCATTCGCGGCGTGCAGA
GCGTGAAGACCGAGATTCCGCTGCAAAAGGTGAAGCTGACGTCCGAAGTGCCGGTGTGA

Upstream 100 bases:

>100_bases
TCTGCCAAATTCGATGAAATCGGGTTGCGTTCTTGCTATATGCTGAGGCCGAATTGGGATCAACCGCCGGTTTTCGGCAT
TTTCTTGGAATCGAATTTCA

Downstream 100 bases:

>100_bases
AGGGCGAGACGAGAGGCCCGCGGTTCGCGGCTTCGGCGCCGCGAAGGTCCGAAGGCGCGTGATCGCCGCGCGGCTCGACG
GGCCGCGCGCCGCGGCGCGA

Product: transcription regulator AsnC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKLDSIDRRILRALQRDGRQQNVELAKEVGLSPSPCLRRVRLLEEAGVIERYVAVLNPAKVGRGLTVFTRVWLKEQDADT
VAHFAEAVQHLPQVVECHLMAGDCDFLLRVVAADIDDYRQFQMQHLTRIRGVQSVKTEIPLQKVKLTSEVPV

Sequences:

>Translated_152_residues
MKLDSIDRRILRALQRDGRQQNVELAKEVGLSPSPCLRRVRLLEEAGVIERYVAVLNPAKVGRGLTVFTRVWLKEQDADT
VAHFAEAVQHLPQVVECHLMAGDCDFLLRVVAADIDDYRQFQMQHLTRIRGVQSVKTEIPLQKVKLTSEVPV
>Mature_152_residues
MKLDSIDRRILRALQRDGRQQNVELAKEVGLSPSPCLRRVRLLEEAGVIERYVAVLNPAKVGRGLTVFTRVWLKEQDADT
VAHFAEAVQHLPQVVECHLMAGDCDFLLRVVAADIDDYRQFQMQHLTRIRGVQSVKTEIPLQKVKLTSEVPV

Specific function: Mediates a global response to leucine. Exogenous leucine affects the expression of a number of different operons; lrp mediates this effect for at least some of these operons. For example it is regulator of the branched-chain amino acid transport genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=146, Percent_Identity=45.2054794520548, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=32.6666666666667, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI1790182, Length=141, Percent_Identity=29.0780141843972, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17266; Mature: 17266

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDSIDRRILRALQRDGRQQNVELAKEVGLSPSPCLRRVRLLEEAGVIERYVAVLNPAK
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH
VGRGLTVFTRVWLKEQDADTVAHFAEAVQHLPQVVECHLMAGDCDFLLRVVAADIDDYRQ
HCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FQMQHLTRIRGVQSVKTEIPLQKVKLTSEVPV
HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCC
>Mature Secondary Structure
MKLDSIDRRILRALQRDGRQQNVELAKEVGLSPSPCLRRVRLLEEAGVIERYVAVLNPAK
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH
VGRGLTVFTRVWLKEQDADTVAHFAEAVQHLPQVVECHLMAGDCDFLLRVVAADIDDYRQ
HCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FQMQHLTRIRGVQSVKTEIPLQKVKLTSEVPV
HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]