| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53717980
Identifier: 53717980
GI number: 53717980
Start: 361650
End: 361946
Strand: Reverse
Name: 53717980
Synonym: BPSL0339
Alternate gene names: NA
Gene position: 361946-361650 (Counterclockwise)
Preceding gene: 53717981
Following gene: 53717979
Centisome position: 8.88
GC content: 77.1
Gene sequence:
>297_bases ATGCGCCAGCGCCTCACCGCTCCCGCCGTTGTCGTCGTGGCCGCGCTCTGCGTCGCGCCGCTCGTCGCCGCATGCAGCGA CGATGCGTCCCACGCGAACGCGGGCGCCGGCACGTCGCCCGCGGCACAGCCGGGCGGCGCGGCGAACGCGTTCAACGGCG GCGCGACGACGGCCGGCAATGCGAGCGCGAGCGCGCCGCTCGCGACGCCCGTGATCCATTACCCGCCCGAAGACGCCGCC GACGACGCATCCGGCGCGGCGGCGGCGTCCGCGCAGAGCGCCTCGCATCCTGGCTGA
Upstream 100 bases:
>100_bases CGTCATAATATGGCGGTCGCAAACGGTTCACGCAACCGACGCATCGTTTCTTCATACTAGCGAACGTTCAGGACCCGCGA TCCCTCAGGAGACACTTCCG
Downstream 100 bases:
>100_bases TCGCCTTTGCCGCGCCCTCTTCCCCGCAGAGCCCCAGGTGAAAACATGACATCAGAAAGCCGCCGCCGTTTCCTGCATAC CGTCGCGCAATCCGCGGGCG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MRQRLTAPAVVVVAALCVAPLVAACSDDASHANAGAGTSPAAQPGGAANAFNGGATTAGNASASAPLATPVIHYPPEDAA DDASGAAAASAQSASHPG
Sequences:
>Translated_98_residues MRQRLTAPAVVVVAALCVAPLVAACSDDASHANAGAGTSPAAQPGGAANAFNGGATTAGNASASAPLATPVIHYPPEDAA DDASGAAAASAQSASHPG >Mature_98_residues MRQRLTAPAVVVVAALCVAPLVAACSDDASHANAGAGTSPAAQPGGAANAFNGGATTAGNASASAPLATPVIHYPPEDAA DDASGAAAASAQSASHPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9075; Mature: 9075
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRLTAPAVVVVAALCVAPLVAACSDDASHANAGAGTSPAAQPGGAANAFNGGATTAGN CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASASAPLATPVIHYPPEDAADDASGAAAASAQSASHPG CCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCC >Mature Secondary Structure MRQRLTAPAVVVVAALCVAPLVAACSDDASHANAGAGTSPAAQPGGAANAFNGGATTAGN CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASASAPLATPVIHYPPEDAADDASGAAAASAQSASHPG CCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA