| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is yggG [C]
Identifier: 53717836
GI number: 53717836
Start: 201249
End: 202193
Strand: Reverse
Name: yggG [C]
Synonym: BPSL0194
Alternate gene names: 53717836
Gene position: 202193-201249 (Counterclockwise)
Preceding gene: 53717837
Following gene: 53717834
Centisome position: 4.96
GC content: 73.02
Gene sequence:
>945_bases ATGCTCGTCGCCGACAACGGCGCGCCGCCGGTGCCGAGCGCGCCCGCCGTCGCCACTCCGGCGGCGCCGGCCGCGGCCCC CGCCGCCGGCAATCCGCAGCCGTACGCGCTCGGCGATCAGCAGGTGCGCTACGGCAACGCGATCGTGTTCCGCAGCCTGA TTCCGTCGCCGCTCCTCGAACAGCTGACCGACAACGAATACCGGCAGACCGTGCAGGACGCCGCGCAGCGCAAGCGCCTG CTGCCGCCGAACAACGCGCGCGTGAAGCGGCTGCGCACGATCGTCATGCGGCTCGCGCCGTATGCGGTCAAGTGGAGCGA GCGCGTGAAGGGCTGGAACTGGGAAATCGAGGTGCTGCGCTCGCGTTCGATCCGCGCGTTCTGCCTGCCGGGCGGCAAGG TGCTCGTCGACAGCGGGCTGCTCGAGCGACTGCGCCTCACCGACGACGAGCTCGGCGTGCTGTTCGCGCACGAGATCGCG CACGCGCTGCGCGAGCACGCGCGCTCGAGCCTCGGCGAGCAGCAGGCCGCGTCGCTCGGCACCGGCGCGACGCCGCTGCC GCCGCTCTTCGGGCTGTCGGAGCCGCTGCCCGCGCCGCTTGGCGTCGTCGAGCGCTTCGCGTCGGTCCGCTACGATCCGA CCGACGAAACCGAGGCCGACGTGATCGGCGGCGACATCGCCGCGCGCGCCGGCTTCGATCCGCGCGCGGCGATCACGCTG TGGGACAAGCTCGCGGTCGCGACACGCGCCGACAAGGACAACGGTTTCATCCATGCGCATCCGTACGACACGCGGCGCCG CAACGATCTGCGCAAGCGCCTCGCCGACCTGATGCCGCTCTATCGGAAGGCGCTCGTCAAAAACGCCGACGCGCGCGCGA ACGCCGCGGGCGCGGGCGCCGCGGCCGGCGCGAAGCAGCGCGGCGCCGCGGCGGCGAATCGGTGA
Upstream 100 bases:
>100_bases TAAGCTGCGCGTCGCCCGCGCCGCGCTCACGTTCGTGGGCGGCGTCGCGCTCGGCGTCGCGGGCCCGGTGCTCGGGTTCG AGCTGTGCATGGCCGAGCCG
Downstream 100 bases:
>100_bases TCGGCATCGGATAATCGATCGGGCGGAGCCGGCGGCGACGTTCGCGCCGCCCCGGCGCCGCATACGATGCATGGATCGGC GCGCTTTCGCGGGTTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: M48 Family Peptidase; Lipoprotein; Zn-Dependent Protease With Chaperone Function; Zn-Dependent Protease; Peptidase M; HtpX Protein; Exported Peptidase; Membrane-Associated Zinc Metalloprotease Peptidase; Zinc Metallopeptidase; Peptidase Family; Signal Peptide; M48 Family Metalloprotease; Zn-Dependent Protease With Chaperone Function Protein; Signal Peptide Protein; M48 Family Zinc Metallopeptidase; Zinc Metalloprotease; M48-Family Peptidase
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MLVADNGAPPVPSAPAVATPAAPAAAPAAGNPQPYALGDQQVRYGNAIVFRSLIPSPLLEQLTDNEYRQTVQDAAQRKRL LPPNNARVKRLRTIVMRLAPYAVKWSERVKGWNWEIEVLRSRSIRAFCLPGGKVLVDSGLLERLRLTDDELGVLFAHEIA HALREHARSSLGEQQAASLGTGATPLPPLFGLSEPLPAPLGVVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITL WDKLAVATRADKDNGFIHAHPYDTRRRNDLRKRLADLMPLYRKALVKNADARANAAGAGAAAGAKQRGAAAANR
Sequences:
>Translated_314_residues MLVADNGAPPVPSAPAVATPAAPAAAPAAGNPQPYALGDQQVRYGNAIVFRSLIPSPLLEQLTDNEYRQTVQDAAQRKRL LPPNNARVKRLRTIVMRLAPYAVKWSERVKGWNWEIEVLRSRSIRAFCLPGGKVLVDSGLLERLRLTDDELGVLFAHEIA HALREHARSSLGEQQAASLGTGATPLPPLFGLSEPLPAPLGVVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITL WDKLAVATRADKDNGFIHAHPYDTRRRNDLRKRLADLMPLYRKALVKNADARANAAGAGAAAGAKQRGAAAANR >Mature_314_residues MLVADNGAPPVPSAPAVATPAAPAAAPAAGNPQPYALGDQQVRYGNAIVFRSLIPSPLLEQLTDNEYRQTVQDAAQRKRL LPPNNARVKRLRTIVMRLAPYAVKWSERVKGWNWEIEVLRSRSIRAFCLPGGKVLVDSGLLERLRLTDDELGVLFAHEIA HALREHARSSLGEQQAASLGTGATPLPPLFGLSEPLPAPLGVVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITL WDKLAVATRADKDNGFIHAHPYDTRRRNDLRKRLADLMPLYRKALVKNADARANAAGAGAAAGAKQRGAAAANR
Specific function: Seems To Regulate The Expression Of Speb. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082185, Length=249, Percent_Identity=24.0963855421687, Blast_Score=65, Evalue=8e-12, Organism=Escherichia coli, GI1788840, Length=176, Percent_Identity=28.9772727272727, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322940, Length=236, Percent_Identity=29.2372881355932, Blast_Score=82, Evalue=9e-17,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.24.- [C]
Molecular weight: Translated: 33827; Mature: 33827
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVADNGAPPVPSAPAVATPAAPAAAPAAGNPQPYALGDQQVRYGNAIVFRSLIPSPLLE CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHCCHHHHH QLTDNEYRQTVQDAAQRKRLLPPNNARVKRLRTIVMRLAPYAVKWSERVKGWNWEIEVLR HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC SRSIRAFCLPGGKVLVDSGLLERLRLTDDELGVLFAHEIAHALREHARSSLGEQQAASLG CCCCEEEECCCCCEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC TGATPLPPLFGLSEPLPAPLGVVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITL CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHCCCCCCHHHHH WDKLAVATRADKDNGFIHAHPYDTRRRNDLRKRLADLMPLYRKALVKNADARANAAGAGA HHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH AAGAKQRGAAAANR HCCCHHHCCCCCCC >Mature Secondary Structure MLVADNGAPPVPSAPAVATPAAPAAAPAAGNPQPYALGDQQVRYGNAIVFRSLIPSPLLE CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHCCHHHHH QLTDNEYRQTVQDAAQRKRLLPPNNARVKRLRTIVMRLAPYAVKWSERVKGWNWEIEVLR HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC SRSIRAFCLPGGKVLVDSGLLERLRLTDDELGVLFAHEIAHALREHARSSLGEQQAASLG CCCCEEEECCCCCEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC TGATPLPPLFGLSEPLPAPLGVVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITL CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHCCCCCCHHHHH WDKLAVATRADKDNGFIHAHPYDTRRRNDLRKRLADLMPLYRKALVKNADARANAAGAGA HHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH AAGAKQRGAAAANR HCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA