| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is ampG [C]
Identifier: 53717837
GI number: 53717837
Start: 202291
End: 203604
Strand: Reverse
Name: ampG [C]
Synonym: BPSL0195
Alternate gene names: 53717837
Gene position: 203604-202291 (Counterclockwise)
Preceding gene: 53717838
Following gene: 53717836
Centisome position: 5.0
GC content: 67.12
Gene sequence:
>1314_bases ATGACCAAACCGCCGCACGACGCGCCCGCCCTCAACGCCCACGAGGACCATCCGGGCTGGCGCGCGTTTCTGAACACGCA CATGCTGATCTGCGTCTTTCTCGGCTTCACGTCGGGACTGCCGCTCTTCACGCTCGTCTACCTGGTGCAGGCCTGGCTGC GCTCGGAAGGCGTGAATCTGAAGGAAATCGGCCTCTTCGCGCTCATTCAGTTCCCCTATACGTGGAAGTTCCTGTGGGCA CCGCTGATGGACCGCTTCATCCCGCGCCTGCCCGGCTGGCGGCCGGGGCGGCGGCGCGGCTGGATGTTCGTCACGCAGTT GCTCGTCGCGGGCGCGATCGCCGCGCTCGGCTTCGTGTCGCCGCGCGAATCGATCTGGACGGTCGCCGCGCTGACGACGC TCGTCGCGTTCTTCGGCGCGAGCGCCGACATCGTGATCGACGCATACCGCCGCGAGCTGCTGCGCGACACCGAGCAGGGC CTCGGCAACGCGGTGCACGTGAACGCGTACAAGGTCGCCGCGCTGATTCCCGGCTCGCTGTCGCTGATCCTGTCCGACCA TCTGCCGTGGGACGCCGTGTTCGCGCTCACCGCCGCGTTCATGCTGCCCGGCATCCTGATGACGCTCGTCGTGCGCGAGC CGGACGTGCACGGCGCGCCGCCGAAGAACCTGTCGGAAGCGGTGATCATGCCGTTTCGCGAATTCATCGGCCGCGACGGC TGGCGCGGCGCGCTGCTCGTGCTCGGCTTCATCTTCCTCTACAAGCTCGGCGACACGATGGCGACGACGCTTTCGACGTC GTTCTTTCTCGATCTCGGCTTCAACAAGACGCAGATCGGCGTGATCGCGAAGACGACCGCGTTCTGGGCGAGCCTCGCGG GCGGCATCATCGGCGGCGTGTGGCTCGTGAAGATCGGCATCGCGCGCGGGCTGTGGATCTTCGGGGTCCTGCAGATCGTG TCGACGCTCGGCTTCGCGTGGCTCGCGAAGGCGGGCCCGGACCCGGTGCTGATGGCCGCCATCTACGGCTTCGAGACGTT CTCGACGGGCCTCACGCTCGCCGCGTTCACCGCATACATCGCGAGCACGACGGACCCGCGCTATACCGCGACGCAGTTCG CGCTCTTCACGAGCCTCGCGTCGGTGCCGCGCACGCTCGCGTCGGCGTCAAGCGGCTTCATCGTGGCGCAGATCGGCTGG TTCGACTATTTCCTCGTCTGTGCGGCGCTCGGCATTCCCGGGATGCTGCTGCTGTTCAAGATCGCGCCGTGGAACGGCAG CATGTCAGGCAACGAGGCCGCCCGTGCAGGCTAA
Upstream 100 bases:
>100_bases TGGTGCTGCACGAAGGGCAACCGATTCGATGGGGAGTGAACTGGCGTGGTAGTCTTGCGGTCTACCGCGTCAAGCGGAGA CAACCCTAGTATTTAGTTCG
Downstream 100 bases:
>100_bases GCTGCGCGTCGCCCGCGCCGCGCTCACGTTCGTGGGCGGCGTCGCGCTCGGCGTCGCGGGCCCGGTGCTCGGGTTCGAGC TGTGCATGGCCGAGCCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTKPPHDAPALNAHEDHPGWRAFLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNLKEIGLFALIQFPYTWKFLWA PLMDRFIPRLPGWRPGRRRGWMFVTQLLVAGAIAALGFVSPRESIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQG LGNAVHVNAYKVAALIPGSLSLILSDHLPWDAVFALTAAFMLPGILMTLVVREPDVHGAPPKNLSEAVIMPFREFIGRDG WRGALLVLGFIFLYKLGDTMATTLSTSFFLDLGFNKTQIGVIAKTTAFWASLAGGIIGGVWLVKIGIARGLWIFGVLQIV STLGFAWLAKAGPDPVLMAAIYGFETFSTGLTLAAFTAYIASTTDPRYTATQFALFTSLASVPRTLASASSGFIVAQIGW FDYFLVCAALGIPGMLLLFKIAPWNGSMSGNEAARAG
Sequences:
>Translated_437_residues MTKPPHDAPALNAHEDHPGWRAFLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNLKEIGLFALIQFPYTWKFLWA PLMDRFIPRLPGWRPGRRRGWMFVTQLLVAGAIAALGFVSPRESIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQG LGNAVHVNAYKVAALIPGSLSLILSDHLPWDAVFALTAAFMLPGILMTLVVREPDVHGAPPKNLSEAVIMPFREFIGRDG WRGALLVLGFIFLYKLGDTMATTLSTSFFLDLGFNKTQIGVIAKTTAFWASLAGGIIGGVWLVKIGIARGLWIFGVLQIV STLGFAWLAKAGPDPVLMAAIYGFETFSTGLTLAAFTAYIASTTDPRYTATQFALFTSLASVPRTLASASSGFIVAQIGW FDYFLVCAALGIPGMLLLFKIAPWNGSMSGNEAARAG >Mature_436_residues TKPPHDAPALNAHEDHPGWRAFLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNLKEIGLFALIQFPYTWKFLWAP LMDRFIPRLPGWRPGRRRGWMFVTQLLVAGAIAALGFVSPRESIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQGL GNAVHVNAYKVAALIPGSLSLILSDHLPWDAVFALTAAFMLPGILMTLVVREPDVHGAPPKNLSEAVIMPFREFIGRDGW RGALLVLGFIFLYKLGDTMATTLSTSFFLDLGFNKTQIGVIAKTTAFWASLAGGIIGGVWLVKIGIARGLWIFGVLQIVS TLGFAWLAKAGPDPVLMAAIYGFETFSTGLTLAAFTAYIASTTDPRYTATQFALFTSLASVPRTLASASSGFIVAQIGWF DYFLVCAALGIPGMLLLFKIAPWNGSMSGNEAARAG
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli AmpG and yeast YBR220c [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=401, Percent_Identity=38.6533665835411, Blast_Score=265, Evalue=4e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004752 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47514; Mature: 47383
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPPHDAPALNAHEDHPGWRAFLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH KEIGLFALIQFPYTWKFLWAPLMDRFIPRLPGWRPGRRRGWMFVTQLLVAGAIAALGFVS HHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC PRESIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQGLGNAVHVNAYKVAALIPGSL CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHEEEEEECCCCC SLILSDHLPWDAVFALTAAFMLPGILMTLVVREPDVHGAPPKNLSEAVIMPFREFIGRDG EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCC WRGALLVLGFIFLYKLGDTMATTLSTSFFLDLGFNKTQIGVIAKTTAFWASLAGGIIGGV CCHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHH WLVKIGIARGLWIFGVLQIVSTLGFAWLAKAGPDPVLMAAIYGFETFSTGLTLAAFTAYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH ASTTDPRYTATQFALFTSLASVPRTLASASSGFIVAQIGWFDYFLVCAALGIPGMLLLFK HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCEEHHHE IAPWNGSMSGNEAARAG ECCCCCCCCCCCCCCCC >Mature Secondary Structure TKPPHDAPALNAHEDHPGWRAFLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH KEIGLFALIQFPYTWKFLWAPLMDRFIPRLPGWRPGRRRGWMFVTQLLVAGAIAALGFVS HHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC PRESIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQGLGNAVHVNAYKVAALIPGSL CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHEEEEEECCCCC SLILSDHLPWDAVFALTAAFMLPGILMTLVVREPDVHGAPPKNLSEAVIMPFREFIGRDG EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCC WRGALLVLGFIFLYKLGDTMATTLSTSFFLDLGFNKTQIGVIAKTTAFWASLAGGIIGGV CCHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHH WLVKIGIARGLWIFGVLQIVSTLGFAWLAKAGPDPVLMAAIYGFETFSTGLTLAAFTAYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH ASTTDPRYTATQFALFTSLASVPRTLASASSGFIVAQIGWFDYFLVCAALGIPGMLLLFK HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCEEHHHE IAPWNGSMSGNEAARAG ECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1956282; 7542800 [H]