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The map label for this gene is mcpA [H]

Identifier: 52786994

GI number: 52786994

Start: 3159084

End: 3161069

Strand: Reverse

Name: mcpA [H]

Synonym: BLi03296

Alternate gene names: 52786994

Gene position: 3161069-3159084 (Counterclockwise)

Preceding gene: 52786995

Following gene: 52786993

Centisome position: 74.86

GC content: 47.89

Gene sequence:

>1986_bases
ATGAAAAAGATATTGGACTGGCTTAAACGTCCGTCTATCTCAAAAAGGCTGTTTTTCAGCTTTATATTGGTTTTAACTTT
GCCGATTTTGGCCTTATCCTATAGTGCGTACCAAACGGCGGGAAGCTCTCTTGAAACGGAAATCATGAGAAGCGCACGCG
ATAATGTCGAACAGCTGAATGAGATCATAGACCAGAATATCGGAGAGAAAGAGGAGGCCGTCTCCTTTTTCAGCGGCTTG
GTAAATGAAAAGCTTTATCAAGAAAAAGAGAACGCATCACTCGTAGAAAGACTCGAGCAGTACGCCAAGCTGAATCAGGA
TGTGGAAGCGATCTACACAGGTTCAAAAGACGGCAAGTTCATCCGATATCCCGCCGAGAAAATGGCGAAAGGCTATAACC
CGGCGGACAGGGACTGGTATAAGCAAGCCGTTGAAAATAAAGGAAAGGTGATCATCACAAACCCTTATAAAACAGCGTCA
ACCGGAACGATGGTCATTACGATTGCGAAGCAGACGGAGGACGGCTCAGGAGTTGTTGCCGTCAACATGAAAATCGATGA
GCTTATCAAAGCGACAGAGCGCGTCAACATCGGAAAAAGCGGCTTTGCGTTTATTTCAAGCAATGACAAAAAATATGTTG
CCCATCCGACAATCGAAGCCGGAACCGAAGGCAAAGGCGACTGGGTTGGACAAATGTACGGCAGTGAGAAAGGCGATTTT
CAATATACATTTGAAGGAAAAGAAAAGAAAATGGCTTTTACGACGAACAAGCTGACCGGCTGGAAAATCGGCGGAACGAT
GTTCACAGATGAGATATCAGAGGCCGCCCAGCCCGTCTTCCACATGGCGATAATCATTTTGGCAGCGGCGATCGTGCTCG
GCGGCATTCTCATCTACTTTATTATCCGCGGAATCAGCAAGCCGTTAAGCGAGCTCGTGTCATCCGCAAAGAGCATCAGC
GGAGGCGATTTGACGCAAAAAATCGAAGTCCGTTCAAAAGACGAATTCGGTCAGCTCGGTACAAGCTTTAATGAAATGGC
CGAATCGCTGAGATCTTTAATCAGCGTCATCCAATCATCAGTTGACAATGTAGCTTCTTCATCTGAAGAGCTTCATGCCA
GCGCGGCGCAGACAAGCAAAGCGACTGAGCATATTACAATGGCCATTGAACAATTTTCCGACGGAAATGAAAGCCAGAAA
GAAAAAGTGGAAGCGAGCTCGCATCAGCTGAATGAAATGAACAACGGGTTATATGACATGTCAAAAACATCAGCTGCGAT
TACCGATGCGTCGCTGAAATCGACTGAGATTGCCGGCAAAGGAGAAGAGCTTGTTCAAAAGACGGTCGGCCAAATGAACT
CGATCGATCGGTCTGTCAAGCAAGCGGAAGCGGTCGTCAAAGGACTTGAAGCCAAATCCAAAGATATCACAAGCATTTTG
CGCGTGATTAACGGAATCGCCGATCAAACGAATCTGCTGGCGCTCAATGCCGCGATCGAAGCGGCAAGGGCCGGGGAATC
GGGCCGCGGCTTCTCGGTAGTGGCTGAAGAAGTCAGGAAGCTCGCCGCACAATCCGCCGACTCGGCGAAGGAAATTGAAC
ATTTAATTCAGGAAATCGTCAAGGAGATCGACAACTCTTTGAACATGTTCAAATCGGTCAATCATGAAGTACAGTCAGGA
CTTCGAATCACCGATGAAACAGAGACAAGCTTCAAAACGATTTACGATATGACCAATGATATCGCAGGAAAGCTGCAGAC
CATGAATGCCGCTGTCGAGCAATTGACGCAAGGTTCCCGCCAAGTCGCGGGCGCGGTCGAAGAAATCGCTGATGTATCGA
GAGAAAGTTCGGCAAGCATTCAGGACATCGCTGCTTCAGCCGAGGAGCAGCTTGCCTCCATGGAAGAGATCAGCGCCTCC
TCCACGACATTGGCGGAGCTGGCTGAAGAACTGCGTGATTTGACACAGAAATTTAAGATTGAATAG

Upstream 100 bases:

>100_bases
AGAATTTTCAGAAATACTTTTTAAAGTTTTTTAATATGCAAAAGTAAATGAAAGCTCCGATATTAGTTTCATAATCTAGA
AGCTAAAGGAGTTATACTAA

Downstream 100 bases:

>100_bases
CTTTAAAACATCCGGTTTTCCTCCGGATGTTTTTTTAGTTATTTTAGACTATAAAAAGTTATAAAATGCATATAAAAACT
TTTAAAAGAATCCGATATTA

Product: McpA

Products: NA

Alternate protein names: H1 [H]

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MKKILDWLKRPSISKRLFFSFILVLTLPILALSYSAYQTAGSSLETEIMRSARDNVEQLNEIIDQNIGEKEEAVSFFSGL
VNEKLYQEKENASLVERLEQYAKLNQDVEAIYTGSKDGKFIRYPAEKMAKGYNPADRDWYKQAVENKGKVIITNPYKTAS
TGTMVITIAKQTEDGSGVVAVNMKIDELIKATERVNIGKSGFAFISSNDKKYVAHPTIEAGTEGKGDWVGQMYGSEKGDF
QYTFEGKEKKMAFTTNKLTGWKIGGTMFTDEISEAAQPVFHMAIIILAAAIVLGGILIYFIIRGISKPLSELVSSAKSIS
GGDLTQKIEVRSKDEFGQLGTSFNEMAESLRSLISVIQSSVDNVASSSEELHASAAQTSKATEHITMAIEQFSDGNESQK
EKVEASSHQLNEMNNGLYDMSKTSAAITDASLKSTEIAGKGEELVQKTVGQMNSIDRSVKQAEAVVKGLEAKSKDITSIL
RVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAAQSADSAKEIEHLIQEIVKEIDNSLNMFKSVNHEVQSG
LRITDETETSFKTIYDMTNDIAGKLQTMNAAVEQLTQGSRQVAGAVEEIADVSRESSASIQDIAASAEEQLASMEEISAS
STTLAELAEELRDLTQKFKIE

Sequences:

>Translated_661_residues
MKKILDWLKRPSISKRLFFSFILVLTLPILALSYSAYQTAGSSLETEIMRSARDNVEQLNEIIDQNIGEKEEAVSFFSGL
VNEKLYQEKENASLVERLEQYAKLNQDVEAIYTGSKDGKFIRYPAEKMAKGYNPADRDWYKQAVENKGKVIITNPYKTAS
TGTMVITIAKQTEDGSGVVAVNMKIDELIKATERVNIGKSGFAFISSNDKKYVAHPTIEAGTEGKGDWVGQMYGSEKGDF
QYTFEGKEKKMAFTTNKLTGWKIGGTMFTDEISEAAQPVFHMAIIILAAAIVLGGILIYFIIRGISKPLSELVSSAKSIS
GGDLTQKIEVRSKDEFGQLGTSFNEMAESLRSLISVIQSSVDNVASSSEELHASAAQTSKATEHITMAIEQFSDGNESQK
EKVEASSHQLNEMNNGLYDMSKTSAAITDASLKSTEIAGKGEELVQKTVGQMNSIDRSVKQAEAVVKGLEAKSKDITSIL
RVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAAQSADSAKEIEHLIQEIVKEIDNSLNMFKSVNHEVQSG
LRITDETETSFKTIYDMTNDIAGKLQTMNAAVEQLTQGSRQVAGAVEEIADVSRESSASIQDIAASAEEQLASMEEISAS
STTLAELAEELRDLTQKFKIE
>Mature_661_residues
MKKILDWLKRPSISKRLFFSFILVLTLPILALSYSAYQTAGSSLETEIMRSARDNVEQLNEIIDQNIGEKEEAVSFFSGL
VNEKLYQEKENASLVERLEQYAKLNQDVEAIYTGSKDGKFIRYPAEKMAKGYNPADRDWYKQAVENKGKVIITNPYKTAS
TGTMVITIAKQTEDGSGVVAVNMKIDELIKATERVNIGKSGFAFISSNDKKYVAHPTIEAGTEGKGDWVGQMYGSEKGDF
QYTFEGKEKKMAFTTNKLTGWKIGGTMFTDEISEAAQPVFHMAIIILAAAIVLGGILIYFIIRGISKPLSELVSSAKSIS
GGDLTQKIEVRSKDEFGQLGTSFNEMAESLRSLISVIQSSVDNVASSSEELHASAAQTSKATEHITMAIEQFSDGNESQK
EKVEASSHQLNEMNNGLYDMSKTSAAITDASLKSTEIAGKGEELVQKTVGQMNSIDRSVKQAEAVVKGLEAKSKDITSIL
RVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAAQSADSAKEIEHLIQEIVKEIDNSLNMFKSVNHEVQSG
LRITDETETSFKTIYDMTNDIAGKLQTMNAAVEQLTQGSRQVAGAVEEIADVSRESSASIQDIAASAEEQLASMEEISAS
STTLAELAEELRDLTQKFKIE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=377, Percent_Identity=31.5649867374005, Blast_Score=135, Evalue=1e-32,
Organism=Escherichia coli, GI2367378, Length=337, Percent_Identity=30.2670623145401, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1788194, Length=388, Percent_Identity=28.6082474226804, Blast_Score=128, Evalue=1e-30,
Organism=Escherichia coli, GI1788195, Length=326, Percent_Identity=30.6748466257669, Blast_Score=123, Evalue=4e-29,
Organism=Escherichia coli, GI1789453, Length=365, Percent_Identity=28.7671232876712, Blast_Score=103, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 72145; Mature: 72145

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILDWLKRPSISKRLFFSFILVLTLPILALSYSAYQTAGSSLETEIMRSARDNVEQLN
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
EIIDQNIGEKEEAVSFFSGLVNEKLYQEKENASLVERLEQYAKLNQDVEAIYTGSKDGKF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCE
IRYPAEKMAKGYNPADRDWYKQAVENKGKVIITNPYKTASTGTMVITIAKQTEDGSGVVA
EECCHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCEEE
VNMKIDELIKATERVNIGKSGFAFISSNDKKYVAHPTIEAGTEGKGDWVGQMYGSEKGDF
EECCHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCE
QYTFEGKEKKMAFTTNKLTGWKIGGTMFTDEISEAAQPVFHMAIIILAAAIVLGGILIYF
EEEECCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIRGISKPLSELVSSAKSISGGDLTQKIEVRSKDEFGQLGTSFNEMAESLRSLISVIQSS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
VDNVASSSEELHASAAQTSKATEHITMAIEQFSDGNESQKEKVEASSHQLNEMNNGLYDM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHC
SKTSAAITDASLKSTEIAGKGEELVQKTVGQMNSIDRSVKQAEAVVKGLEAKSKDITSIL
HHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAAQSADSAKEIEHLIQEIV
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
KEIDNSLNMFKSVNHEVQSGLRITDETETSFKTIYDMTNDIAGKLQTMNAAVEQLTQGSR
HHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVAGAVEEIADVSRESSASIQDIAASAEEQLASMEEISASSTTLAELAEELRDLTQKFKI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
E
C
>Mature Secondary Structure
MKKILDWLKRPSISKRLFFSFILVLTLPILALSYSAYQTAGSSLETEIMRSARDNVEQLN
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
EIIDQNIGEKEEAVSFFSGLVNEKLYQEKENASLVERLEQYAKLNQDVEAIYTGSKDGKF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCE
IRYPAEKMAKGYNPADRDWYKQAVENKGKVIITNPYKTASTGTMVITIAKQTEDGSGVVA
EECCHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCEEE
VNMKIDELIKATERVNIGKSGFAFISSNDKKYVAHPTIEAGTEGKGDWVGQMYGSEKGDF
EECCHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCE
QYTFEGKEKKMAFTTNKLTGWKIGGTMFTDEISEAAQPVFHMAIIILAAAIVLGGILIYF
EEEECCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIRGISKPLSELVSSAKSISGGDLTQKIEVRSKDEFGQLGTSFNEMAESLRSLISVIQSS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
VDNVASSSEELHASAAQTSKATEHITMAIEQFSDGNESQKEKVEASSHQLNEMNNGLYDM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHC
SKTSAAITDASLKSTEIAGKGEELVQKTVGQMNSIDRSVKQAEAVVKGLEAKSKDITSIL
HHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAAQSADSAKEIEHLIQEIV
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
KEIDNSLNMFKSVNHEVQSGLRITDETETSFKTIYDMTNDIAGKLQTMNAAVEQLTQGSR
HHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVAGAVEEIADVSRESSASIQDIAASAEEQLASMEEISASSTTLAELAEELRDLTQKFKI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]