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The map label for this gene is mcpA [H]

Identifier: 52786993

GI number: 52786993

Start: 3156968

End: 3158950

Strand: Reverse

Name: mcpA [H]

Synonym: BLi03295

Alternate gene names: 52786993

Gene position: 3158950-3156968 (Counterclockwise)

Preceding gene: 52786994

Following gene: 52786992

Centisome position: 74.81

GC content: 47.81

Gene sequence:

>1983_bases
ATGTCAAAGATTGTCAATTGGGTGAAGCGTCCCTCCATTGCAAAGAAATTAATTCTTTCATTCTTGCTTATTTTAACCGT
TCCAATCATCGTCCTTTCCTATAGTGCGTATCAAACGGCAAGCAGTACGCTTGACGGAGAAATCATGGACAATGCGCGCG
AAAACGTTAACCAGTTGAATGAAATCATCAATCAGAATATCAGCCAGAAAACAAACGCCATGTCTTATTTCAGCGGGTTC
ATTAAAGAAAACTCTTTTACAGGGAAAGAAAGCGACGCTTTAAAAGTGAAATTCGAACAGTTCGCCAAGCTTCATCCCGA
TGTTGAAGGGATCTTTACCGGTTCAAAGGACGGGAAGTTCATCCGCTACCCGGATCAAAAGATGCCGAGCGGATATAATC
CGGTAGAGCGGGACTGGTATAAAAAAGCCGCTGAACACAAGGGCGAAGTCGTTATCACAGACCCCTACAAAACGGCGTCA
ACCGGAACGGTGGTTATCACCATCGCCAAGATGCATGAGGACGGCTCCGGCGTTGTCGCCGTCAATATGAAAATCGAAGA
GCTCATTAAAGCGACAGAACGCGTAACCATCGGGAAAAAAGGCTTTGCCTTTATCACGAGCGCTGATAAAAAGTTTGTCG
CCCACCCGAAACATGATGCGGGCACAGATGTCGAAGGCAGCTGGGCGGAAAAGGTATATGCGAATGACAAAGGAACATTC
AAATACACGCTTGACGGCGAAAAGCAGATGGCTTTCGCGACCAACAAGCTGACCGGCTGGAAAATCGGCGGAACCATGTA
TATCACTGAATTAAAAGAAGCCTCACAGCCTGTGCTGAATGCCGCTCTGATTACGTTGGGCGCCAGCATCATCATTGGCG
TGCTTCTCATGATTCTCATCATCAGATCGATCACAGGGCCGCTCCGCGAACTCGTTTCCTCTGCGAAAAGCATCAGCGGC
GGCGATCTGACGCAAAAAATCACTGTCCGCTCAAAAGATGAAATCGGACAGCTCGGAACAAGCTTCAACGATATGGCTGA
ATCGCTGAGCTCTTTAATCAGCGTCATTCAGACATCGGTTGAAAACGTTGCTTCTTCGTCAGAGCAGCTGACCGCGAGCG
CGGATCAGACAAGCAAGGCGACAGAACATATTACATCTGCGATCGAACAATTTTCAAACGGAAATGAAAGCCAAAATGAG
AAAGTGGAAATCAGTGCGCAGCAGCTGACTGACATGAACAGCCGATTGCATGAAATGTCCAAAGTCTCAGCATCGATTAC
AGAATCATCCATTCAATCGACGGACATTGCCGGTACAGGCGGAGAGCTTGTTCAAAAAACGGTCGGACAGATGAATTCCA
TCGATCATTCCGTTAAACAGGCGGAATCCGTCGTGAAAGGACTTGAGAGCAAATCAAAAGACATTACGGCGATCCTGCGG
GTGATCAACGGCATCGCAGACCAGACGAATTTGCTCGCGTTGAACGCGGCAATTGAAGCAGCAAGAGCCGGTGAAGCCGG
AAGAGGGTTTTCTGTAGTTGCCGAAGAAGTGCGCAAACTGGCTGAGCAATCCGCGTCATCGGCAAAAGAAATTGAAGCGC
TCATTCAGGAAATCGTCAATGAAATCGGAAAGTCGCTGGACATGTTCCGGGACGTCAACCGTGAAGTACAGTCGGGACTC
ACCATCACAGATGAAACAGATACAAGCTTTAAGCAGATTTATGACATGACAAACGAAATCGCGGGCAAGCTGCAGACGAT
GAATGCGGCAGTTGAAGAGCTGTCAGAAGGGTCACAGCAAGTCGCGGGAGCGGTTGAAGAAATTGCAGACGTATCGCGTG
AAAGCTCAGGAAGCATTCAAGACATTGCCGCTTCGGCTGAAGAACAGCTCGCTTCAATGGAGGAAATCAGTTCTTCTGCG
GCTACGCTTGAACAAATGGCTGAAGAACTGCGCGATTTAACGAAAAAATTTAAGATTGACTAA

Upstream 100 bases:

>100_bases
TTTAGTTATTTTAGACTATAAAAAGTTATAAAATGCATATAAAAACTTTTAAAAGAATCCGATATTAGGGATATAACAGA
AAAGAGGAGTCAACAATTCT

Downstream 100 bases:

>100_bases
ACATCAGGCTTCCGCCGATCCGGCAGCCTTTTGCCCGGGAAAAGCATCTTTTTAAAGGAACGGGGAAGGGTATAAATAGG
TTTAAACAGACTATCATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: H1 [H]

Number of amino acids: Translated: 660; Mature: 659

Protein sequence:

>660_residues
MSKIVNWVKRPSIAKKLILSFLLILTVPIIVLSYSAYQTASSTLDGEIMDNARENVNQLNEIINQNISQKTNAMSYFSGF
IKENSFTGKESDALKVKFEQFAKLHPDVEGIFTGSKDGKFIRYPDQKMPSGYNPVERDWYKKAAEHKGEVVITDPYKTAS
TGTVVITIAKMHEDGSGVVAVNMKIEELIKATERVTIGKKGFAFITSADKKFVAHPKHDAGTDVEGSWAEKVYANDKGTF
KYTLDGEKQMAFATNKLTGWKIGGTMYITELKEASQPVLNAALITLGASIIIGVLLMILIIRSITGPLRELVSSAKSISG
GDLTQKITVRSKDEIGQLGTSFNDMAESLSSLISVIQTSVENVASSSEQLTASADQTSKATEHITSAIEQFSNGNESQNE
KVEISAQQLTDMNSRLHEMSKVSASITESSIQSTDIAGTGGELVQKTVGQMNSIDHSVKQAESVVKGLESKSKDITAILR
VINGIADQTNLLALNAAIEAARAGEAGRGFSVVAEEVRKLAEQSASSAKEIEALIQEIVNEIGKSLDMFRDVNREVQSGL
TITDETDTSFKQIYDMTNEIAGKLQTMNAAVEELSEGSQQVAGAVEEIADVSRESSGSIQDIAASAEEQLASMEEISSSA
ATLEQMAEELRDLTKKFKID

Sequences:

>Translated_660_residues
MSKIVNWVKRPSIAKKLILSFLLILTVPIIVLSYSAYQTASSTLDGEIMDNARENVNQLNEIINQNISQKTNAMSYFSGF
IKENSFTGKESDALKVKFEQFAKLHPDVEGIFTGSKDGKFIRYPDQKMPSGYNPVERDWYKKAAEHKGEVVITDPYKTAS
TGTVVITIAKMHEDGSGVVAVNMKIEELIKATERVTIGKKGFAFITSADKKFVAHPKHDAGTDVEGSWAEKVYANDKGTF
KYTLDGEKQMAFATNKLTGWKIGGTMYITELKEASQPVLNAALITLGASIIIGVLLMILIIRSITGPLRELVSSAKSISG
GDLTQKITVRSKDEIGQLGTSFNDMAESLSSLISVIQTSVENVASSSEQLTASADQTSKATEHITSAIEQFSNGNESQNE
KVEISAQQLTDMNSRLHEMSKVSASITESSIQSTDIAGTGGELVQKTVGQMNSIDHSVKQAESVVKGLESKSKDITAILR
VINGIADQTNLLALNAAIEAARAGEAGRGFSVVAEEVRKLAEQSASSAKEIEALIQEIVNEIGKSLDMFRDVNREVQSGL
TITDETDTSFKQIYDMTNEIAGKLQTMNAAVEELSEGSQQVAGAVEEIADVSRESSGSIQDIAASAEEQLASMEEISSSA
ATLEQMAEELRDLTKKFKID
>Mature_659_residues
SKIVNWVKRPSIAKKLILSFLLILTVPIIVLSYSAYQTASSTLDGEIMDNARENVNQLNEIINQNISQKTNAMSYFSGFI
KENSFTGKESDALKVKFEQFAKLHPDVEGIFTGSKDGKFIRYPDQKMPSGYNPVERDWYKKAAEHKGEVVITDPYKTAST
GTVVITIAKMHEDGSGVVAVNMKIEELIKATERVTIGKKGFAFITSADKKFVAHPKHDAGTDVEGSWAEKVYANDKGTFK
YTLDGEKQMAFATNKLTGWKIGGTMYITELKEASQPVLNAALITLGASIIIGVLLMILIIRSITGPLRELVSSAKSISGG
DLTQKITVRSKDEIGQLGTSFNDMAESLSSLISVIQTSVENVASSSEQLTASADQTSKATEHITSAIEQFSNGNESQNEK
VEISAQQLTDMNSRLHEMSKVSASITESSIQSTDIAGTGGELVQKTVGQMNSIDHSVKQAESVVKGLESKSKDITAILRV
INGIADQTNLLALNAAIEAARAGEAGRGFSVVAEEVRKLAEQSASSAKEIEALIQEIVNEIGKSLDMFRDVNREVQSGLT
ITDETDTSFKQIYDMTNEIAGKLQTMNAAVEELSEGSQQVAGAVEEIADVSRESSGSIQDIAASAEEQLASMEEISSSAA
TLEQMAEELRDLTKKFKID

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=365, Percent_Identity=32.8767123287671, Blast_Score=137, Evalue=3e-33,
Organism=Escherichia coli, GI2367378, Length=351, Percent_Identity=31.3390313390313, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI1788195, Length=317, Percent_Identity=31.5457413249211, Blast_Score=129, Evalue=7e-31,
Organism=Escherichia coli, GI1788194, Length=345, Percent_Identity=30.7246376811594, Blast_Score=122, Evalue=7e-29,
Organism=Escherichia coli, GI1789453, Length=360, Percent_Identity=26.1111111111111, Blast_Score=101, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 71467; Mature: 71336

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIVNWVKRPSIAKKLILSFLLILTVPIIVLSYSAYQTASSTLDGEIMDNARENVNQLN
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EIINQNISQKTNAMSYFSGFIKENSFTGKESDALKVKFEQFAKLHPDVEGIFTGSKDGKF
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCE
IRYPDQKMPSGYNPVERDWYKKAAEHKGEVVITDPYKTASTGTVVITIAKMHEDGSGVVA
EECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCEEE
VNMKIEELIKATERVTIGKKGFAFITSADKKFVAHPKHDAGTDVEGSWAEKVYANDKGTF
EECCHHHHHHHHHHHEECCCCCEEEECCCCHHCCCCCCCCCCCCCCCHHHHHHCCCCCCE
KYTLDGEKQMAFATNKLTGWKIGGTMYITELKEASQPVLNAALITLGASIIIGVLLMILI
EEEECCCCHHHHHHCCCCCEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRSITGPLRELVSSAKSISGGDLTQKITVRSKDEIGQLGTSFNDMAESLSSLISVIQTSV
HHHCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ENVASSSEQLTASADQTSKATEHITSAIEQFSNGNESQNEKVEISAQQLTDMNSRLHEMS
HHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHH
KVSASITESSIQSTDIAGTGGELVQKTVGQMNSIDHSVKQAESVVKGLESKSKDITAILR
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VINGIADQTNLLALNAAIEAARAGEAGRGFSVVAEEVRKLAEQSASSAKEIEALIQEIVN
HHHHHCCCCHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EIGKSLDMFRDVNREVQSGLTITDETDTSFKQIYDMTNEIAGKLQTMNAAVEELSEGSQQ
HHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGAVEEIADVSRESSGSIQDIAASAEEQLASMEEISSSAATLEQMAEELRDLTKKFKID
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKIVNWVKRPSIAKKLILSFLLILTVPIIVLSYSAYQTASSTLDGEIMDNARENVNQLN
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EIINQNISQKTNAMSYFSGFIKENSFTGKESDALKVKFEQFAKLHPDVEGIFTGSKDGKF
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCE
IRYPDQKMPSGYNPVERDWYKKAAEHKGEVVITDPYKTASTGTVVITIAKMHEDGSGVVA
EECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCEEE
VNMKIEELIKATERVTIGKKGFAFITSADKKFVAHPKHDAGTDVEGSWAEKVYANDKGTF
EECCHHHHHHHHHHHEECCCCCEEEECCCCHHCCCCCCCCCCCCCCCHHHHHHCCCCCCE
KYTLDGEKQMAFATNKLTGWKIGGTMYITELKEASQPVLNAALITLGASIIIGVLLMILI
EEEECCCCHHHHHHCCCCCEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRSITGPLRELVSSAKSISGGDLTQKITVRSKDEIGQLGTSFNDMAESLSSLISVIQTSV
HHHCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ENVASSSEQLTASADQTSKATEHITSAIEQFSNGNESQNEKVEISAQQLTDMNSRLHEMS
HHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHH
KVSASITESSIQSTDIAGTGGELVQKTVGQMNSIDHSVKQAESVVKGLESKSKDITAILR
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VINGIADQTNLLALNAAIEAARAGEAGRGFSVVAEEVRKLAEQSASSAKEIEALIQEIVN
HHHHHCCCCHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EIGKSLDMFRDVNREVQSGLTITDETDTSFKQIYDMTNEIAGKLQTMNAAVEELSEGSQQ
HHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGAVEEIADVSRESSGSIQDIAASAEEQLASMEEISSSAATLEQMAEELRDLTKKFKID
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]