Click here to switch to the map view.

The map label for this gene is mcpA [H]

Identifier: 52786995

GI number: 52786995

Start: 3161215

End: 3163197

Strand: Reverse

Name: mcpA [H]

Synonym: BLi03297

Alternate gene names: 52786995

Gene position: 3163197-3161215 (Counterclockwise)

Preceding gene: 52786997

Following gene: 52786994

Centisome position: 74.91

GC content: 47.45

Gene sequence:

>1983_bases
ATGAAAAAGCTTTTAAATTGGACGAAACGTCCTTCTATTTCTAAAAAATTAATTTTCTCATTTATATTCATTTTAACAAT
TCCGATCTTGGTTCTTTCGGTTACTTCATATTTTACGGCCAGCAGCACGCTCGAGGATGAGATTTTGAGAAGTGCGAAAG
ACAATATCGATGAACTGAACGACATTATTCAGCAAGATATCGGCAGCAAGGAGACTTCCATTGCGTATTTCAGCGAATGG
ATTGATCAAAAAGCGTACAAAGAGAAAGGCCAGACTGCAATTAAACAACGGTTTGAGCAGTTTGCAAAACAGAATCCCGA
CGTCGAACTCGTCTTCACCGGATCGGAAGATAGTGTTTACGCACAATATCCGAATGCTCCACTGCCCGACGGGTATGACC
CGGTAGAACGCGACTGGTACAAACAGGCTGTCCAGGAAAAAGGGAAAACGATTGTAACTGAACCTTATGAGTCTGCATCA
ACGGGGCATATGGTCGTCACGATCGCCAAGCAGAATAAAGACGGTTCTGGCGTAGTCGCCCTTGACTTGAACATTGACAA
GCTGATCAAATCGGCAAACAGCATCAGCATCGGAAAAACCGGATATGCATTCATCATCGGCGAGGGGAAAACGTATGTCG
CCCATCCGAAAATTAAAGCCGGCACAGAAGCAGAAGCTGATCTGACAGAGCAAATGTTCAGCAAAGAGAGCGGCTTGTTC
ACCTTTAATGAAAAAGGCAAAGAAAAGAAAACGGTCTTCACGACAAACAAACTAACCGGTTGGAAAATCGGCGGAAAGAT
GAATACAGCAGAGATTAAAGACGCTGCCCAGCCCGTGCTTCACATGGCAGTCATGACATTGGCAGGCGCGATTATTCTGG
GCGGAATCCTTGTTTACTTTATCGTCCGCGCGATCAGCAAGCCTTTAAATCAACTCGTCTCTTCTGCAAAAAGCATCAGC
GAAGGAGATCTGACACAAAAAATCGATGTCCGCTCCAAAGACGAATTCGGCCAGCTGGGCACAAGCTTCAACGAAATGGC
TGACTCGTTGCGCTCGCTGATCAGCACGATTCAAGAATCGGTCGACAATGTGGCATCTTCTTCAGAGCAGCTGACGGCAA
GCGCGGACCAGACAAGCAAAGCGACCGAGCACATTACATTAGCCATCGAGCGGTTCTCAAGCGGCGCTGAAAGTCAAAGC
GAAAAAGTCGAAGAAAGCTCACAGCGGCTCAGCCAAATGAATGAGAAGCTGAATGAAATTGCAGGCGTGTCAGAATCGAT
TACAGAATCCTCGGGTAAATCGACGGAAATTGCCGAAACAGGCGGAGAGCTCGTCCAACAAACCGTCGGGCAGATGAACT
CGATCAACAGGTCTGTCAAACAGGCTGAACAGGTTGTCAAAGGGCTTGAAGCGAAATCGAAAGATATCACCGCGATCCTG
CGCGTCATAAACGGAATCGCCGATCAAACGAATTTATTAGCTCTGAACGCCGCCATCGAGGCAGCGCGGGCCGGCGAATC
AGGCAGAGGCTTCTCGGTTGTCGCTGAAGAAGTCAGAAAGCTTGCGGCTCAATCAGCGGGATCGGCAAAAGAAATCGAAG
CGCTGATTCAGGATATCGTTAAGGAAATCGAACATTCGCTCAACATGTTCAAATCGGTCAACCAGGAAGTACAGTCAGGA
CTCGAAATTACCGAAGAAACGGAATCTAGTTTTAAACACATTTACGACATGACAAACGAAATCGCAGGCAAGCTGCAAAC
GATGAATGCCGCCGTAGAGCATTTATCAACAGGTTCTCACGAAATATCCGATGCGGTCGAAGAGATCGCCGACGTATCGC
GTGAAAGCTCTGCCGGCATTCAGGACATCGCCGCTTCAGCGGAAGAACAGCTGGCTTCCATGGAAGAAATCAGCTCATCC
GCTGCAACGCTCGAACAGATGGCTGAAGAGCTGCGCGATTTAACGAAAAAGTTTAAGATTTGA

Upstream 100 bases:

>100_bases
TATGCCTGATGCTTGGGCAGGAAAACGGTCTAATTTTCCGCTTTTTTTATTTAAAAAATAGACCCCGTCTCCGATAAAAG
TAGAGAAAGGGGAATCACAC

Downstream 100 bases:

>100_bases
TGAAAAGAGGCTGCTGGTCAGCCTCTTTTTTCAGTTCTATCTTCAAGAATTTTCAGAAATACTTTTTAAAGTTTTTTAAT
ATGCAAAAGTAAATGAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: H1 [H]

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MKKLLNWTKRPSISKKLIFSFIFILTIPILVLSVTSYFTASSTLEDEILRSAKDNIDELNDIIQQDIGSKETSIAYFSEW
IDQKAYKEKGQTAIKQRFEQFAKQNPDVELVFTGSEDSVYAQYPNAPLPDGYDPVERDWYKQAVQEKGKTIVTEPYESAS
TGHMVVTIAKQNKDGSGVVALDLNIDKLIKSANSISIGKTGYAFIIGEGKTYVAHPKIKAGTEAEADLTEQMFSKESGLF
TFNEKGKEKKTVFTTNKLTGWKIGGKMNTAEIKDAAQPVLHMAVMTLAGAIILGGILVYFIVRAISKPLNQLVSSAKSIS
EGDLTQKIDVRSKDEFGQLGTSFNEMADSLRSLISTIQESVDNVASSSEQLTASADQTSKATEHITLAIERFSSGAESQS
EKVEESSQRLSQMNEKLNEIAGVSESITESSGKSTEIAETGGELVQQTVGQMNSINRSVKQAEQVVKGLEAKSKDITAIL
RVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAAQSAGSAKEIEALIQDIVKEIEHSLNMFKSVNQEVQSG
LEITEETESSFKHIYDMTNEIAGKLQTMNAAVEHLSTGSHEISDAVEEIADVSRESSAGIQDIAASAEEQLASMEEISSS
AATLEQMAEELRDLTKKFKI

Sequences:

>Translated_660_residues
MKKLLNWTKRPSISKKLIFSFIFILTIPILVLSVTSYFTASSTLEDEILRSAKDNIDELNDIIQQDIGSKETSIAYFSEW
IDQKAYKEKGQTAIKQRFEQFAKQNPDVELVFTGSEDSVYAQYPNAPLPDGYDPVERDWYKQAVQEKGKTIVTEPYESAS
TGHMVVTIAKQNKDGSGVVALDLNIDKLIKSANSISIGKTGYAFIIGEGKTYVAHPKIKAGTEAEADLTEQMFSKESGLF
TFNEKGKEKKTVFTTNKLTGWKIGGKMNTAEIKDAAQPVLHMAVMTLAGAIILGGILVYFIVRAISKPLNQLVSSAKSIS
EGDLTQKIDVRSKDEFGQLGTSFNEMADSLRSLISTIQESVDNVASSSEQLTASADQTSKATEHITLAIERFSSGAESQS
EKVEESSQRLSQMNEKLNEIAGVSESITESSGKSTEIAETGGELVQQTVGQMNSINRSVKQAEQVVKGLEAKSKDITAIL
RVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAAQSAGSAKEIEALIQDIVKEIEHSLNMFKSVNQEVQSG
LEITEETESSFKHIYDMTNEIAGKLQTMNAAVEHLSTGSHEISDAVEEIADVSRESSAGIQDIAASAEEQLASMEEISSS
AATLEQMAEELRDLTKKFKI
>Mature_660_residues
MKKLLNWTKRPSISKKLIFSFIFILTIPILVLSVTSYFTASSTLEDEILRSAKDNIDELNDIIQQDIGSKETSIAYFSEW
IDQKAYKEKGQTAIKQRFEQFAKQNPDVELVFTGSEDSVYAQYPNAPLPDGYDPVERDWYKQAVQEKGKTIVTEPYESAS
TGHMVVTIAKQNKDGSGVVALDLNIDKLIKSANSISIGKTGYAFIIGEGKTYVAHPKIKAGTEAEADLTEQMFSKESGLF
TFNEKGKEKKTVFTTNKLTGWKIGGKMNTAEIKDAAQPVLHMAVMTLAGAIILGGILVYFIVRAISKPLNQLVSSAKSIS
EGDLTQKIDVRSKDEFGQLGTSFNEMADSLRSLISTIQESVDNVASSSEQLTASADQTSKATEHITLAIERFSSGAESQS
EKVEESSQRLSQMNEKLNEIAGVSESITESSGKSTEIAETGGELVQQTVGQMNSINRSVKQAEQVVKGLEAKSKDITAIL
RVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAAQSAGSAKEIEALIQDIVKEIEHSLNMFKSVNQEVQSG
LEITEETESSFKHIYDMTNEIAGKLQTMNAAVEHLSTGSHEISDAVEEIADVSRESSAGIQDIAASAEEQLASMEEISSS
AATLEQMAEELRDLTKKFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=336, Percent_Identity=31.547619047619, Blast_Score=135, Evalue=7e-33,
Organism=Escherichia coli, GI1787690, Length=388, Percent_Identity=29.639175257732, Blast_Score=129, Evalue=6e-31,
Organism=Escherichia coli, GI1788195, Length=320, Percent_Identity=30, Blast_Score=129, Evalue=8e-31,
Organism=Escherichia coli, GI1788194, Length=365, Percent_Identity=29.8630136986301, Blast_Score=120, Evalue=4e-28,
Organism=Escherichia coli, GI1789453, Length=375, Percent_Identity=25.8666666666667, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 71872; Mature: 71872

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLNWTKRPSISKKLIFSFIFILTIPILVLSVTSYFTASSTLEDEILRSAKDNIDELN
CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHH
DIIQQDIGSKETSIAYFSEWIDQKAYKEKGQTAIKQRFEQFAKQNPDVELVFTGSEDSVY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEE
AQYPNAPLPDGYDPVERDWYKQAVQEKGKTIVTEPYESASTGHMVVTIAKQNKDGSGVVA
EECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEECCCCCCCEEE
LDLNIDKLIKSANSISIGKTGYAFIIGEGKTYVAHPKIKAGTEAEADLTEQMFSKESGLF
EECCHHHHHHCCCCCEECCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCE
TFNEKGKEKKTVFTTNKLTGWKIGGKMNTAEIKDAAQPVLHMAVMTLAGAIILGGILVYF
EECCCCCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVRAISKPLNQLVSSAKSISEGDLTQKIDVRSKDEFGQLGTSFNEMADSLRSLISTIQES
HHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
VDNVASSSEQLTASADQTSKATEHITLAIERFSSGAESQSEKVEESSQRLSQMNEKLNEI
HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGVSESITESSGKSTEIAETGGELVQQTVGQMNSINRSVKQAEQVVKGLEAKSKDITAIL
HCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAAQSAGSAKEIEALIQDIV
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KEIEHSLNMFKSVNQEVQSGLEITEETESSFKHIYDMTNEIAGKLQTMNAAVEHLSTGSH
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EISDAVEEIADVSRESSAGIQDIAASAEEQLASMEEISSSAATLEQMAEELRDLTKKFKI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLLNWTKRPSISKKLIFSFIFILTIPILVLSVTSYFTASSTLEDEILRSAKDNIDELN
CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHH
DIIQQDIGSKETSIAYFSEWIDQKAYKEKGQTAIKQRFEQFAKQNPDVELVFTGSEDSVY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEE
AQYPNAPLPDGYDPVERDWYKQAVQEKGKTIVTEPYESASTGHMVVTIAKQNKDGSGVVA
EECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEECCCCCCCEEE
LDLNIDKLIKSANSISIGKTGYAFIIGEGKTYVAHPKIKAGTEAEADLTEQMFSKESGLF
EECCHHHHHHCCCCCEECCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCE
TFNEKGKEKKTVFTTNKLTGWKIGGKMNTAEIKDAAQPVLHMAVMTLAGAIILGGILVYF
EECCCCCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVRAISKPLNQLVSSAKSISEGDLTQKIDVRSKDEFGQLGTSFNEMADSLRSLISTIQES
HHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
VDNVASSSEQLTASADQTSKATEHITLAIERFSSGAESQSEKVEESSQRLSQMNEKLNEI
HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGVSESITESSGKSTEIAETGGELVQQTVGQMNSINRSVKQAEQVVKGLEAKSKDITAIL
HCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAAQSAGSAKEIEALIQDIV
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KEIEHSLNMFKSVNQEVQSGLEITEETESSFKHIYDMTNEIAGKLQTMNAAVEHLSTGSH
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EISDAVEEIADVSRESSAGIQDIAASAEEQLASMEEISSSAATLEQMAEELRDLTKKFKI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]