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The map label for this gene is ytxD [H]

Identifier: 52786849

GI number: 52786849

Start: 3006354

End: 3007172

Strand: Reverse

Name: ytxD [H]

Synonym: BLi03124

Alternate gene names: 52786849

Gene position: 3007172-3006354 (Counterclockwise)

Preceding gene: 52786850

Following gene: 52786848

Centisome position: 71.22

GC content: 46.15

Gene sequence:

>819_bases
ATGAAACGATTTGATTATCTGACACCGGTCGGTTTTATTCTGGGTATTTTCATTTTAGTGCTCGGCGTTGTCTCTGGAGC
GGGGCTTTCCGGTTTTTATTCGTTTATCGATTTGACGTCTTTTTTTATTGTGACGGGTGGATTGTGTGCAGCTGTATTCA
TCAGCTTTTCCCCGAAAGATTTAAAAAGAGCGCCGGCTGTGCTGAAGCAGGTCTTTATTTCGGAGGAAGATGATGTGCGC
GAATTGGTCAAAACCTTTGTCAGCCTGTCTGAACAGGCGCGCAAACAAGGAATTTTATCATTGGACGCCAATGTCAATGA
AATGAAAGACCCGTTTTTGAAAAAAGGCCTGCTCCTTGCCATCGACGGATGGGATGAGGAGACGATCCGCAATGTGATGA
ACTCGGAAATTGCCGCGATGGAAGAACGACACAGAAAGGGGAGAAGGATCTTTGAAAAAGCAGGAGAATTTGCGCCTGCA
TGGGGAATGATCGGAACGCTTGTCGGTCTCGTCATGATGCTCAAAAACCTGAACAAGCCGGAAACGCTCGGTCCGAATAT
GGCAATCGCCCTTTTGACGACGCTTTACGGATCACTTTTAGCCAACATGCTGTTTATACCGATCGCCGCGAAGCTTGAAG
AAAAGACGGAGAATGAAATCTTTAAGAAGCAAGTCATGATCGAAGGCATCATCGGCATCCAATCGGGAAGAAATCCGCGA
AATCTTGAAAGTCAGCTTGTCGTTTTCAGTTCAAAAGAAGAATGGACAAAAAAGCGGGCGGACCGCATGAAACAAAAGGA
CAGGCCTCATGAAGCTTAG

Upstream 100 bases:

>100_bases
AATGATCATCATTAAATAAACGAGAAAGAAAGCAAGTGTTCACAGCTTTTTTCGTGAATTGCTTGCTTTCTTTTCCTTGA
GCTGGAGAGATTATGAAAAA

Downstream 100 bases:

>100_bases
ACATGAACGAAGGAAGCGCGAGCAGGGCCGCAAATCGCCAAACTGGATCATCACGTTTTCGGATTTGATTACGCTCATCC
TCGTGTTCTTTATTTTACTG

Product: flagellar motor protein MotP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKRFDYLTPVGFILGIFILVLGVVSGAGLSGFYSFIDLTSFFIVTGGLCAAVFISFSPKDLKRAPAVLKQVFISEEDDVR
ELVKTFVSLSEQARKQGILSLDANVNEMKDPFLKKGLLLAIDGWDEETIRNVMNSEIAAMEERHRKGRRIFEKAGEFAPA
WGMIGTLVGLVMMLKNLNKPETLGPNMAIALLTTLYGSLLANMLFIPIAAKLEEKTENEIFKKQVMIEGIIGIQSGRNPR
NLESQLVVFSSKEEWTKKRADRMKQKDRPHEA

Sequences:

>Translated_272_residues
MKRFDYLTPVGFILGIFILVLGVVSGAGLSGFYSFIDLTSFFIVTGGLCAAVFISFSPKDLKRAPAVLKQVFISEEDDVR
ELVKTFVSLSEQARKQGILSLDANVNEMKDPFLKKGLLLAIDGWDEETIRNVMNSEIAAMEERHRKGRRIFEKAGEFAPA
WGMIGTLVGLVMMLKNLNKPETLGPNMAIALLTTLYGSLLANMLFIPIAAKLEEKTENEIFKKQVMIEGIIGIQSGRNPR
NLESQLVVFSSKEEWTKKRADRMKQKDRPHEA
>Mature_272_residues
MKRFDYLTPVGFILGIFILVLGVVSGAGLSGFYSFIDLTSFFIVTGGLCAAVFISFSPKDLKRAPAVLKQVFISEEDDVR
ELVKTFVSLSEQARKQGILSLDANVNEMKDPFLKKGLLLAIDGWDEETIRNVMNSEIAAMEERHRKGRRIFEKAGEFAPA
WGMIGTLVGLVMMLKNLNKPETLGPNMAIALLTTLYGSLLANMLFIPIAAKLEEKTENEIFKKQVMIEGIIGIQSGRNPR
NLESQLVVFSSKEEWTKKRADRMKQKDRPHEA

Specific function: May be involved in some transport function [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 30419; Mature: 30419

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFDYLTPVGFILGIFILVLGVVSGAGLSGFYSFIDLTSFFIVTGGLCAAVFISFSPKD
CCCCHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LKRAPAVLKQVFISEEDDVRELVKTFVSLSEQARKQGILSLDANVNEMKDPFLKKGLLLA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCCCEEE
IDGWDEETIRNVMNSEIAAMEERHRKGRRIFEKAGEFAPAWGMIGTLVGLVMMLKNLNKP
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
ETLGPNMAIALLTTLYGSLLANMLFIPIAAKLEEKTENEIFKKQVMIEGIIGIQSGRNPR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NLESQLVVFSSKEEWTKKRADRMKQKDRPHEA
CCHHHEEEECCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKRFDYLTPVGFILGIFILVLGVVSGAGLSGFYSFIDLTSFFIVTGGLCAAVFISFSPKD
CCCCHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LKRAPAVLKQVFISEEDDVRELVKTFVSLSEQARKQGILSLDANVNEMKDPFLKKGLLLA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCCCEEE
IDGWDEETIRNVMNSEIAAMEERHRKGRRIFEKAGEFAPAWGMIGTLVGLVMMLKNLNKP
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
ETLGPNMAIALLTTLYGSLLANMLFIPIAAKLEEKTENEIFKKQVMIEGIIGIQSGRNPR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NLESQLVVFSSKEEWTKKRADRMKQKDRPHEA
CCHHHEEEECCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377 [H]