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The map label for this gene is ynbB [H]

Identifier: 52785747

GI number: 52785747

Start: 1946299

End: 1947564

Strand: Direct

Name: ynbB [H]

Synonym: BLi01991

Alternate gene names: 52785747

Gene position: 1946299-1947564 (Clockwise)

Preceding gene: 52785746

Following gene: 52785748

Centisome position: 46.09

GC content: 51.03

Gene sequence:

>1266_bases
ATGTTTGAGACATTAAAACACGGAGATCTACTAAAGAAAACGGCGGTGGAGGCTGAAACCGACATCGCACAGATCCACAA
AACAATTGATGAAATCAGTGAACGAAATGAGTGGAGGGTGCTCGAAAGCTACAGAAAGCACAAAGTATCGGACACGCATT
TCACACCATCGACAGGCTACGGCTACGATGACATCGGCCGCGATACGCTGGAAAAAATCTATGCCGACGTCTTCGGCGGT
GAAGCGGCCCTTGTCAGACCGCAGATCATCTCGGGAACCCATGCAATATCAATCGCTTTATTCGGCGTTCTCCGCCCGGG
GGAAGAACTTCTTTACATCACTGGCAAACCGTACGATACCCTCGAAGAGATCGTCGGCGTCAGGGGCGAGGAAAACTCGG
GGTCTTTGAAGGATTTCCAGATCGGATACAGCCATGTCGAGCTGACAGAAGAGGGAGCCGTTGATTTTGACCGGGTGGCA
GCTTCCATCACGCCGCAGACAAAGGTCGTCGGAATCCAGCGCTCAAAAGGATACGCAGACCGTCCGTCTTTTACAATTGA
TGAGATTGAGAAGATGATTCGCTTTGTTAAAGAAATAAACGAAAACATCATCGTTTTCGTCGACAACTGCTACGGCGAAT
TTGTAGAAGAGCGTGAGCCGTGCCATGTTGGAGCGGATCTCATGGCAGGCTCGCTTATTAAAAACCCGGGAGGCGGCCTC
GCCAAAACAGGCGGCTATATCACCGGCAAGGAAAAATGGGTGAAAGCCTGCTCCTACAGAATGACTTCACCGGGAATTGG
CAGTGAAGCCGGTGCATCGTTGTACACGCTCCAGGAGATGTATCAGGGCTTTTTCCTTGCGCCGCATGTCGTCTCCCAGG
CATTAAAAGGAGCAGTGTTCACAGCCCGATTCCTCGAAAAGCTCGGCTTTAGGACGAATCCTTCATGGGGCAGCAAGCGG
ACCGATTTGATCCAGTCTGTCGAATTTTCCACCCCGGAGCAGATGATCGCGTTTTGCCAGGCGATTCAGTACGCTTCTCC
GATCAATGCCCATGTGACGCCGTATCCGAGCTATATGCCGGGCTATGAAGACGATGTCATTATGGCTGCAGGCACTTTCG
TACAGGGAGCAAGCATTGAATTATCAGCGGATGGCCCTATAAGACCGCCTTATGTGGCGTATGTCCAAGGCGGATTAACC
TACTCCCATGTGAAAAATGCGATATGCAGTGCTGTGGATGCGCTCATGAAGCAGGGATTAATGTAA

Upstream 100 bases:

>100_bases
CGAAGATCGCGAAGCATATGAAGTGGAAGGATATATTCTCCCTGACCAAAACATTTTGGGAGAGCTGAAGAAGTATATGT
AGGAAAGGATACTGCAAAAC

Downstream 100 bases:

>100_bases
AGAAAATAAAGAATATTTTCATGTAAAGAATCCTTACATCGAGTTGACACATTATATAACATCACATATAATAAATTTAT
ATAAGAAAAGGAGGAAATTG

Product: YnbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MFETLKHGDLLKKTAVEAETDIAQIHKTIDEISERNEWRVLESYRKHKVSDTHFTPSTGYGYDDIGRDTLEKIYADVFGG
EAALVRPQIISGTHAISIALFGVLRPGEELLYITGKPYDTLEEIVGVRGEENSGSLKDFQIGYSHVELTEEGAVDFDRVA
ASITPQTKVVGIQRSKGYADRPSFTIDEIEKMIRFVKEINENIIVFVDNCYGEFVEEREPCHVGADLMAGSLIKNPGGGL
AKTGGYITGKEKWVKACSYRMTSPGIGSEAGASLYTLQEMYQGFFLAPHVVSQALKGAVFTARFLEKLGFRTNPSWGSKR
TDLIQSVEFSTPEQMIAFCQAIQYASPINAHVTPYPSYMPGYEDDVIMAAGTFVQGASIELSADGPIRPPYVAYVQGGLT
YSHVKNAICSAVDALMKQGLM

Sequences:

>Translated_421_residues
MFETLKHGDLLKKTAVEAETDIAQIHKTIDEISERNEWRVLESYRKHKVSDTHFTPSTGYGYDDIGRDTLEKIYADVFGG
EAALVRPQIISGTHAISIALFGVLRPGEELLYITGKPYDTLEEIVGVRGEENSGSLKDFQIGYSHVELTEEGAVDFDRVA
ASITPQTKVVGIQRSKGYADRPSFTIDEIEKMIRFVKEINENIIVFVDNCYGEFVEEREPCHVGADLMAGSLIKNPGGGL
AKTGGYITGKEKWVKACSYRMTSPGIGSEAGASLYTLQEMYQGFFLAPHVVSQALKGAVFTARFLEKLGFRTNPSWGSKR
TDLIQSVEFSTPEQMIAFCQAIQYASPINAHVTPYPSYMPGYEDDVIMAAGTFVQGASIELSADGPIRPPYVAYVQGGLT
YSHVKNAICSAVDALMKQGLM
>Mature_421_residues
MFETLKHGDLLKKTAVEAETDIAQIHKTIDEISERNEWRVLESYRKHKVSDTHFTPSTGYGYDDIGRDTLEKIYADVFGG
EAALVRPQIISGTHAISIALFGVLRPGEELLYITGKPYDTLEEIVGVRGEENSGSLKDFQIGYSHVELTEEGAVDFDRVA
ASITPQTKVVGIQRSKGYADRPSFTIDEIEKMIRFVKEINENIIVFVDNCYGEFVEEREPCHVGADLMAGSLIKNPGGGL
AKTGGYITGKEKWVKACSYRMTSPGIGSEAGASLYTLQEMYQGFFLAPHVVSQALKGAVFTARFLEKLGFRTNPSWGSKR
TDLIQSVEFSTPEQMIAFCQAIQYASPINAHVTPYPSYMPGYEDDVIMAAGTFVQGASIELSADGPIRPPYVAYVQGGLT
YSHVKNAICSAVDALMKQGLM

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 46309; Mature: 46309

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFETLKHGDLLKKTAVEAETDIAQIHKTIDEISERNEWRVLESYRKHKVSDTHFTPSTGY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC
GYDDIGRDTLEKIYADVFGGEAALVRPQIISGTHAISIALFGVLRPGEELLYITGKPYDT
CCHHCCHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHHHCCCCCEEEEEECCCHHH
LEEIVGVRGEENSGSLKDFQIGYSHVELTEEGAVDFDRVAASITPQTKVVGIQRSKGYAD
HHHHHCCCCCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCCCCC
RPSFTIDEIEKMIRFVKEINENIIVFVDNCYGEFVEEREPCHVGADLMAGSLIKNPGGGL
CCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
AKTGGYITGKEKWVKACSYRMTSPGIGSEAGASLYTLQEMYQGFFLAPHVVSQALKGAVF
CCCCCEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TARFLEKLGFRTNPSWGSKRTDLIQSVEFSTPEQMIAFCQAIQYASPINAHVTPYPSYMP
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GYEDDVIMAAGTFVQGASIELSADGPIRPPYVAYVQGGLTYSHVKNAICSAVDALMKQGL
CCCCCEEEEECCEEECCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC
M
C
>Mature Secondary Structure
MFETLKHGDLLKKTAVEAETDIAQIHKTIDEISERNEWRVLESYRKHKVSDTHFTPSTGY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC
GYDDIGRDTLEKIYADVFGGEAALVRPQIISGTHAISIALFGVLRPGEELLYITGKPYDT
CCHHCCHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHHHCCCCCEEEEEECCCHHH
LEEIVGVRGEENSGSLKDFQIGYSHVELTEEGAVDFDRVAASITPQTKVVGIQRSKGYAD
HHHHHCCCCCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCCCCC
RPSFTIDEIEKMIRFVKEINENIIVFVDNCYGEFVEEREPCHVGADLMAGSLIKNPGGGL
CCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
AKTGGYITGKEKWVKACSYRMTSPGIGSEAGASLYTLQEMYQGFFLAPHVVSQALKGAVF
CCCCCEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TARFLEKLGFRTNPSWGSKRTDLIQSVEFSTPEQMIAFCQAIQYASPINAHVTPYPSYMP
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GYEDDVIMAAGTFVQGASIELSADGPIRPPYVAYVQGGLTYSHVKNAICSAVDALMKQGL
CCCCCEEEEECCEEECCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC
M
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]