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The map label for this gene is gatC

Identifier: 52784529

GI number: 52784529

Start: 735263

End: 735553

Strand: Direct

Name: gatC

Synonym: BLi00730

Alternate gene names: 52784529

Gene position: 735263-735553 (Clockwise)

Preceding gene: 52784526

Following gene: 52784530

Centisome position: 17.41

GC content: 45.36

Gene sequence:

>291_bases
ATGTCGCGTATTTCTATAGAAGAAGTAAAGCATGTCGCCCATCTTGCCAGACTGGCGATTACGGACGAGGAAGCGGCGAT
GTTTACCGAACAGCTTGACAGCATTATTTCATTTGCAGAAGAGCTGAACGAAGTCGATACAGAGAATGTTAAACCAACAA
CGCACGTATTGCAAATGAAGAATATCATGAGGGAAGATGTACCTGATAAAGGGCTTCCGGTTGAAGACGTCGTCAAAAAT
GCGCCTGATCATAAAGACGGCTACATCCGCGTGCCGTCAATCTTGGACTAA

Upstream 100 bases:

>100_bases
AATGGGGCGAAGATCGCGGTTTTGTTGATTTAGAAGGCTAAAATTTGATATGATCAGTATTATATGACTAAGCGAGAATA
ACCTTGGAGGTGTTTTTAGT

Downstream 100 bases:

>100_bases
TAAAGGAGGGAGCGAGAAAACATGTCACTGTTTGACCATAAAATATCTGAATTAAAACGTCTCATACATAATAAAGAGAT
CAGCATATCAGATTTAGTCG

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSRISIEEVKHVAHLARLAITDEEAAMFTEQLDSIISFAEELNEVDTENVKPTTHVLQMKNIMREDVPDKGLPVEDVVKN
APDHKDGYIRVPSILD

Sequences:

>Translated_96_residues
MSRISIEEVKHVAHLARLAITDEEAAMFTEQLDSIISFAEELNEVDTENVKPTTHVLQMKNIMREDVPDKGLPVEDVVKN
APDHKDGYIRVPSILD
>Mature_95_residues
SRISIEEVKHVAHLARLAITDEEAAMFTEQLDSIISFAEELNEVDTENVKPTTHVLQMKNIMREDVPDKGLPVEDVVKNA
PDHKDGYIRVPSILD

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_BACLD (Q65MP9)

Other databases:

- EMBL:   CP000002
- EMBL:   AE017333
- RefSeq:   YP_077953.1
- RefSeq:   YP_090358.1
- ProteinModelPortal:   Q65MP9
- SMR:   Q65MP9
- STRING:   Q65MP9
- EnsemblBacteria:   EBBACT00000057633
- EnsemblBacteria:   EBBACT00000058979
- GeneID:   3031303
- GeneID:   3099931
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi00730
- KEGG:   bli:BL00600
- NMPDR:   fig|279010.5.peg.1036
- eggNOG:   COG0721
- GeneTree:   EBGT00050000001712
- HOGENOM:   HBG586403
- OMA:   PTSHAVP
- ProtClustDB:   PRK00034
- BioCyc:   BLIC279010-1:BLI00730-MONOMER
- BioCyc:   BLIC279010:BL00600-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10838; Mature: 10707

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRISIEEVKHVAHLARLAITDEEAAMFTEQLDSIISFAEELNEVDTENVKPTTHVLQMK
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
NIMREDVPDKGLPVEDVVKNAPDHKDGYIRVPSILD
HHHHHCCCCCCCCHHHHHHCCCCCCCCEEECCCCCC
>Mature Secondary Structure 
SRISIEEVKHVAHLARLAITDEEAAMFTEQLDSIISFAEELNEVDTENVKPTTHVLQMK
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
NIMREDVPDKGLPVEDVVKNAPDHKDGYIRVPSILD
HHHHHCCCCCCCCHHHHHHCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA