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The map label for this gene is ydbT [H]

Identifier: 52784368

GI number: 52784368

Start: 554303

End: 555784

Strand: Direct

Name: ydbT [H]

Synonym: BLi00548

Alternate gene names: 52784368

Gene position: 554303-555784 (Clockwise)

Preceding gene: 52784367

Following gene: 52784370

Centisome position: 13.13

GC content: 47.91

Gene sequence:

>1482_bases
ATGATGTCTGAACCGAGACGCATGCACCCTGCCGCCGTCATTCTCAACTTTATCAAAGGCCTTGTTGAGACGGTTAAAAA
TTTTATCATTCCATTTGGCGTGGTGATTTTTTTAAATCAATCGCAAACAGTCAAAATGATAGCGATCGCCGCGGCCGTGC
TGTTTTTCATTGCTTTGGTTGTGACGAGCATCATCAAGTGGAGCAAATTTACATACCGTATCGAAGAGGATGAATTGCGA
ATAGAGGAAGGCTTGATCAATAAGAAAAAAAGGTATATTCCGATCGAACGGATTCAAACGATCAACACAAGCGCAGGCCT
CATTCAACAAATGTTCAAGCTGGTGAAGCTTCAAGTCGAAACGGCAAGCGGAGGAACGGAAGCGGAAGTTTCCCTGGTCG
CCATTACCCAGGCAGAAGCCGAACGTATTCAGCAAGCGCTTTTCGAAAGGAAAAAAGCGGCGGAAGACACGGGGACCGAT
GTCCCGGTTCCGCTGGAAGAAACTGCTGAAGAGGCGGAGGAAGCGGAAGAGCCGGTAATGATGTACAAAATGACCGGCCA
GGAGCTCTTAACCGCCGCTTCAACCTCAAGCGGCATCGGCGTTATTATTTCAGGGGTATTCGCTTTTTTCACTCAAGTCG
ATGATTTCTTTGATTTGGATTGGCTGTATGACCGCTTTGCTTTTTTGAACAGCGCAGGTGCCGCCGTCATCGCATTGGCC
GCCTTTGTTGCCCTTTTCATCGCATGGCTGCTCAGCATCGTCGGGATGCTTTTGAAATATGCGAATTTTACTGTCGTGCG
TAAAGAGAAAGAAATCGTCATTTCCAGAGGGCTGATTGAAAAGCAACAAATCACGATTCCGCTCCAGCGGATTCAAGCGA
TTAAAATCAAGGAGAGCCTGATCAGGCAGCCTTTTGGACTTGCAGCCGTCACGATCGTCAGCGCAGGCGGAAACGTCCTG
GAAGAAGATAAATCAGCCATCTTATTTCCAATCATCAGCAAAAAAATAATCAATCAGCGTCTCGGCGAATTCATTCCGGA
TTATGCGCCGGAAGACGATTTGAACCGCTTGCCGAAACGCGCGCTGCGCCGCTATATCCTGCGCGCATCCTGGCCGGTTC
TCGCCGTCGTTCCGCTTTCCATTCTGTTTCCGCCATGGGGCTATTTGTCCGCTGTATTGATTCCTTTTTACTGGATCATC
GGCTATTTCTCATACCGCGATGCCGGATGGAAGATCAGCGGCAGCAAAATCATCATGTCATCGCGCTTCATCGGCAGAAC
AACCGCTGTCATTCAACGCAGGCGCATGCAGGTTTTCGAAGTCAGCCGCTCGTATTTCCAGCGCAGAAAACAGCTTGTTT
CGATTCATACATCAACAAAATCGTCTGTTTTAATGGAGAAGTTTTCGGTGGCTGATGTTGAGGAGAAAGATTCGGACGAT
ATCATTGCATGGTATTCATATGAAAAAAGAGTGAACGGTTAA

Upstream 100 bases:

>100_bases
ATTTCAACAGCAGCGACGACCCATTCCATTCCCGCTTTGGATGTTGAAGAGGCCGATCAGCTCAGAGATTCCATTTCCAG
GCTGGCAAGGGTGACTGAAG

Downstream 100 bases:

>100_bases
AAGCCGTTCACTCTTTTGTTTAACAATGGCGGAGCCAAGGCGAGTCCGCCCAGCAGACCGAAGATGTGCGCCATCATATT
GATATTTTGGTTTACAAACG

Product: YdbT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MMSEPRRMHPAAVILNFIKGLVETVKNFIIPFGVVIFLNQSQTVKMIAIAAAVLFFIALVVTSIIKWSKFTYRIEEDELR
IEEGLINKKKRYIPIERIQTINTSAGLIQQMFKLVKLQVETASGGTEAEVSLVAITQAEAERIQQALFERKKAAEDTGTD
VPVPLEETAEEAEEAEEPVMMYKMTGQELLTAASTSSGIGVIISGVFAFFTQVDDFFDLDWLYDRFAFLNSAGAAVIALA
AFVALFIAWLLSIVGMLLKYANFTVVRKEKEIVISRGLIEKQQITIPLQRIQAIKIKESLIRQPFGLAAVTIVSAGGNVL
EEDKSAILFPIISKKIINQRLGEFIPDYAPEDDLNRLPKRALRRYILRASWPVLAVVPLSILFPPWGYLSAVLIPFYWII
GYFSYRDAGWKISGSKIIMSSRFIGRTTAVIQRRRMQVFEVSRSYFQRRKQLVSIHTSTKSSVLMEKFSVADVEEKDSDD
IIAWYSYEKRVNG

Sequences:

>Translated_493_residues
MMSEPRRMHPAAVILNFIKGLVETVKNFIIPFGVVIFLNQSQTVKMIAIAAAVLFFIALVVTSIIKWSKFTYRIEEDELR
IEEGLINKKKRYIPIERIQTINTSAGLIQQMFKLVKLQVETASGGTEAEVSLVAITQAEAERIQQALFERKKAAEDTGTD
VPVPLEETAEEAEEAEEPVMMYKMTGQELLTAASTSSGIGVIISGVFAFFTQVDDFFDLDWLYDRFAFLNSAGAAVIALA
AFVALFIAWLLSIVGMLLKYANFTVVRKEKEIVISRGLIEKQQITIPLQRIQAIKIKESLIRQPFGLAAVTIVSAGGNVL
EEDKSAILFPIISKKIINQRLGEFIPDYAPEDDLNRLPKRALRRYILRASWPVLAVVPLSILFPPWGYLSAVLIPFYWII
GYFSYRDAGWKISGSKIIMSSRFIGRTTAVIQRRRMQVFEVSRSYFQRRKQLVSIHTSTKSSVLMEKFSVADVEEKDSDD
IIAWYSYEKRVNG
>Mature_493_residues
MMSEPRRMHPAAVILNFIKGLVETVKNFIIPFGVVIFLNQSQTVKMIAIAAAVLFFIALVVTSIIKWSKFTYRIEEDELR
IEEGLINKKKRYIPIERIQTINTSAGLIQQMFKLVKLQVETASGGTEAEVSLVAITQAEAERIQQALFERKKAAEDTGTD
VPVPLEETAEEAEEAEEPVMMYKMTGQELLTAASTSSGIGVIISGVFAFFTQVDDFFDLDWLYDRFAFLNSAGAAVIALA
AFVALFIAWLLSIVGMLLKYANFTVVRKEKEIVISRGLIEKQQITIPLQRIQAIKIKESLIRQPFGLAAVTIVSAGGNVL
EEDKSAILFPIISKKIINQRLGEFIPDYAPEDDLNRLPKRALRRYILRASWPVLAVVPLSILFPPWGYLSAVLIPFYWII
GYFSYRDAGWKISGSKIIMSSRFIGRTTAVIQRRRMQVFEVSRSYFQRRKQLVSIHTSTKSSVLMEKFSVADVEEKDSDD
IIAWYSYEKRVNG

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 55666; Mature: 55666

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSEPRRMHPAAVILNFIKGLVETVKNFIIPFGVVIFLNQSQTVKMIAIAAAVLFFIALV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHH
VTSIIKWSKFTYRIEEDELRIEEGLINKKKRYIPIERIQTINTSAGLIQQMFKLVKLQVE
HHHHHHHHHHEEEECHHHHHHHHHHHCCHHCCCCHHHHHHCCCHHHHHHHHHHHHHEEEE
TASGGTEAEVSLVAITQAEAERIQQALFERKKAAEDTGTDVPVPLEETAEEAEEAEEPVM
ECCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEE
MYKMTGQELLTAASTSSGIGVIISGVFAFFTQVDDFFDLDWLYDRFAFLNSAGAAVIALA
EEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH
AFVALFIAWLLSIVGMLLKYANFTVVRKEKEIVISRGLIEKQQITIPLQRIQAIKIKESL
HHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHH
IRQPFGLAAVTIVSAGGNVLEEDKSAILFPIISKKIINQRLGEFIPDYAPEDDLNRLPKR
HCCCCCHHHHEEEECCCCHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ALRRYILRASWPVLAVVPLSILFPPWGYLSAVLIPFYWIIGYFSYRDAGWKISGSKIIMS
HHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEE
SRFIGRTTAVIQRRRMQVFEVSRSYFQRRKQLVSIHTSTKSSVLMEKFSVADVEEKDSDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
IIAWYSYEKRVNG
EEEEEEHHHCCCC
>Mature Secondary Structure
MMSEPRRMHPAAVILNFIKGLVETVKNFIIPFGVVIFLNQSQTVKMIAIAAAVLFFIALV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHH
VTSIIKWSKFTYRIEEDELRIEEGLINKKKRYIPIERIQTINTSAGLIQQMFKLVKLQVE
HHHHHHHHHHEEEECHHHHHHHHHHHCCHHCCCCHHHHHHCCCHHHHHHHHHHHHHEEEE
TASGGTEAEVSLVAITQAEAERIQQALFERKKAAEDTGTDVPVPLEETAEEAEEAEEPVM
ECCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEE
MYKMTGQELLTAASTSSGIGVIISGVFAFFTQVDDFFDLDWLYDRFAFLNSAGAAVIALA
EEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH
AFVALFIAWLLSIVGMLLKYANFTVVRKEKEIVISRGLIEKQQITIPLQRIQAIKIKESL
HHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHH
IRQPFGLAAVTIVSAGGNVLEEDKSAILFPIISKKIINQRLGEFIPDYAPEDDLNRLPKR
HCCCCCHHHHEEEECCCCHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ALRRYILRASWPVLAVVPLSILFPPWGYLSAVLIPFYWIIGYFSYRDAGWKISGSKIIMS
HHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEE
SRFIGRTTAVIQRRRMQVFEVSRSYFQRRKQLVSIHTSTKSSVLMEKFSVADVEEKDSDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
IIAWYSYEKRVNG
EEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]