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The map label for this gene is ydcC [H]

Identifier: 52784370

GI number: 52784370

Start: 556675

End: 557682

Strand: Direct

Name: ydcC [H]

Synonym: BLi00550

Alternate gene names: 52784370

Gene position: 556675-557682 (Clockwise)

Preceding gene: 52784368

Following gene: 52784371

Centisome position: 13.18

GC content: 44.74

Gene sequence:

>1008_bases
GTGAGAAAAAGCTTTGTTTTGCTTTTAACGGGGCTGCTTGTAATCCTTATGCTTTCTGCCTGCGGCCAAAAATCGCAAGA
AGATGTTGTGACGGGGCTCGACAAGAAGGCAAAAGAATACACGTCCTATAAGGCAAAAGCGAAAATGACCATTGAAACGG
GAAATGAACCGCAGGAGTACAACGTGGAAATCTGGCATAAAAAACCTTCTCTTTACCGGGTCTATTTGGAAAACCCGAAA
AAAGACCAGAGCCAGGTGATCTTGCGCAATGAAAACGGCGTGTTTGTTTTGACTCCGTCGCTGAATAAAAGCTTCCGCTT
TCACAGCGACTGGCCCAATAACAGCAGCCAGGTATACTTATTCGAATCGCTCGTAAAGGATGTCAAAAATGATGGGGAAG
CTTCTTTTTCCGCAAAGGATTCAAAATACATTTTTGAAACGAAAACGAATTATCAGCATAATCAGATGCTGCCGACTCAG
GAAATCGTTTTCCATAAAAAGACCATGGCTCCTTCATCGGTTAAAGTGATGGATACCGACCGCAAACCGATGGTAAAGGT
TGAGTTTACAAGCTTTGAATTCGATAAGCCGCTCGATAAAGACTCTTTTGATGAAAAGAAAAATATGACGCTGTCTCAAA
TTGACGTAGCGACAAGCGCTGACGTGTCAGACTCTTTCGCTGTCAAAACGCCGCTCGATGTGCCTCAGGGCGTGAAAAAG
CTTGAAGAGAAAGAGATGGCGACTGAAGACGGCAAACGGATCGTCATCACATATGGCGGTGAAAAATCCTTTACATTGAT
TCAGGAAAAAGCCCGCGTCGCCAAAACATCCACTTCCGTATCCATGAACGGAGAGCCCGTTGACCTCGGCTTCACGGTCG
GCGCACTGACGGATAAATCGTTGTCATGGACATATGACGGAGTCGATTACTTTATCTCATCAGAAGATCTTTCTCAAGAT
GAACTTCTGATGGTTGCAAAAAGCATGCAGGGACAGTCTTCGAAATAG

Upstream 100 bases:

>100_bases
CACGCCGATACAGCCGGCCCTGTTCTTATGGCGTACCGTTAAAGTCGAACAAGCGGTTTCTTCCTTTTTACATCAATGAT
TAAAAAGGGGTTGAAAAAAG

Downstream 100 bases:

>100_bases
ACTGTGCCGTATCCGGCAGCCTGTTTTCCGCCCGGAAGCGGAAAGCAGGCTTTTTTATATTTGCGTCGCAAGCGTATGAT
TTCGACAGCTTTTCCGTAAA

Product: YdcC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MRKSFVLLLTGLLVILMLSACGQKSQEDVVTGLDKKAKEYTSYKAKAKMTIETGNEPQEYNVEIWHKKPSLYRVYLENPK
KDQSQVILRNENGVFVLTPSLNKSFRFHSDWPNNSSQVYLFESLVKDVKNDGEASFSAKDSKYIFETKTNYQHNQMLPTQ
EIVFHKKTMAPSSVKVMDTDRKPMVKVEFTSFEFDKPLDKDSFDEKKNMTLSQIDVATSADVSDSFAVKTPLDVPQGVKK
LEEKEMATEDGKRIVITYGGEKSFTLIQEKARVAKTSTSVSMNGEPVDLGFTVGALTDKSLSWTYDGVDYFISSEDLSQD
ELLMVAKSMQGQSSK

Sequences:

>Translated_335_residues
MRKSFVLLLTGLLVILMLSACGQKSQEDVVTGLDKKAKEYTSYKAKAKMTIETGNEPQEYNVEIWHKKPSLYRVYLENPK
KDQSQVILRNENGVFVLTPSLNKSFRFHSDWPNNSSQVYLFESLVKDVKNDGEASFSAKDSKYIFETKTNYQHNQMLPTQ
EIVFHKKTMAPSSVKVMDTDRKPMVKVEFTSFEFDKPLDKDSFDEKKNMTLSQIDVATSADVSDSFAVKTPLDVPQGVKK
LEEKEMATEDGKRIVITYGGEKSFTLIQEKARVAKTSTSVSMNGEPVDLGFTVGALTDKSLSWTYDGVDYFISSEDLSQD
ELLMVAKSMQGQSSK
>Mature_335_residues
MRKSFVLLLTGLLVILMLSACGQKSQEDVVTGLDKKAKEYTSYKAKAKMTIETGNEPQEYNVEIWHKKPSLYRVYLENPK
KDQSQVILRNENGVFVLTPSLNKSFRFHSDWPNNSSQVYLFESLVKDVKNDGEASFSAKDSKYIFETKTNYQHNQMLPTQ
EIVFHKKTMAPSSVKVMDTDRKPMVKVEFTSFEFDKPLDKDSFDEKKNMTLSQIDVATSADVSDSFAVKTPLDVPQGVKK
LEEKEMATEDGKRIVITYGGEKSFTLIQEKARVAKTSTSVSMNGEPVDLGFTVGALTDKSLSWTYDGVDYFISSEDLSQD
ELLMVAKSMQGQSSK

Specific function: required for efficient sporulation [H]

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37818; Mature: 37818

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSFVLLLTGLLVILMLSACGQKSQEDVVTGLDKKAKEYTSYKAKAKMTIETGNEPQEY
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHCEEEEEEEEEECCCCCCEE
NVEIWHKKPSLYRVYLENPKKDQSQVILRNENGVFVLTPSLNKSFRFHSDWPNNSSQVYL
CEEEEECCCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCEEEECCCCCCCCEEEE
FESLVKDVKNDGEASFSAKDSKYIFETKTNYQHNQMLPTQEIVFHKKTMAPSSVKVMDTD
HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHEEHHCCCCCCEEEEECC
RKPMVKVEFTSFEFDKPLDKDSFDEKKNMTLSQIDVATSADVSDSFAVKTPLDVPQGVKK
CCCEEEEEEECEECCCCCCCCCCCHHHCCEEEHEEEECCCCCCCCEEEECCCCCHHHHHH
LEEKEMATEDGKRIVITYGGEKSFTLIQEKARVAKTSTSVSMNGEPVDLGFTVGALTDKS
HHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCEEEEEEEEECCCCCC
LSWTYDGVDYFISSEDLSQDELLMVAKSMQGQSSK
CEEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRKSFVLLLTGLLVILMLSACGQKSQEDVVTGLDKKAKEYTSYKAKAKMTIETGNEPQEY
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHCEEEEEEEEEECCCCCCEE
NVEIWHKKPSLYRVYLENPKKDQSQVILRNENGVFVLTPSLNKSFRFHSDWPNNSSQVYL
CEEEEECCCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCEEEECCCCCCCCEEEE
FESLVKDVKNDGEASFSAKDSKYIFETKTNYQHNQMLPTQEIVFHKKTMAPSSVKVMDTD
HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHEEHHCCCCCCEEEEECC
RKPMVKVEFTSFEFDKPLDKDSFDEKKNMTLSQIDVATSADVSDSFAVKTPLDVPQGVKK
CCCEEEEEEECEECCCCCCCCCCCHHHCCEEEHEEEECCCCCCCCEEEECCCCCHHHHHH
LEEKEMATEDGKRIVITYGGEKSFTLIQEKARVAKTSTSVSMNGEPVDLGFTVGALTDKS
HHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCEEEEEEEEECCCCCC
LSWTYDGVDYFISSEDLSQDELLMVAKSMQGQSSK
CEEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]