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The map label for this gene is ydbS [H]

Identifier: 52784367

GI number: 52784367

Start: 553834

End: 554313

Strand: Direct

Name: ydbS [H]

Synonym: BLi00547

Alternate gene names: 52784367

Gene position: 553834-554313 (Clockwise)

Preceding gene: 52784366

Following gene: 52784368

Centisome position: 13.12

GC content: 49.79

Gene sequence:

>480_bases
TTGAGAAGCGAGCCGAAAAATCAAATCAGCCGTGATGGCGTTAAAGTCTGGAGAATCACGGCTTGTATCACATCATTCGT
TTTAATGCTGGCTGCAGCAGGCCTGATTGCCGCCGGGGTGATATTTAAGTGGCCGGTATGGATCGGCATTTTGTCAGCGG
CCGTTTGGCTGGGGATTTCATTTGTCATCATTATCATGATTCCGAATATCCGCCACAGAGTCTGGCGCTACGAAGTCCAT
GAGAACGAAATTGATATTCAGCACGGCATCTTTGTGGTGACCCGCGTGATCGTTCCGATGGTCAGAGTCCAGCATGTTGA
TACATCGCAGGGCCCCATCCTCAGAAAATATAATCTCGCCTCCGTGCAAATTTCAACAGCAGCGACGACCCATTCCATTC
CCGCTTTGGATGTTGAAGAGGCCGATCAGCTCAGAGATTCCATTTCCAGGCTGGCAAGGGTGACTGAAGATGATGTCTGA

Upstream 100 bases:

>100_bases
CCTTTTTTACGGATTCGCCTTTTTTTAAAAACTAAAGCCTTTAAACGAAACATTTTCAGACCGAAGACCGTAAATAGAAT
GAGATTGGGGGAATCGAGTT

Downstream 100 bases:

>100_bases
ACCGAGACGCATGCACCCTGCCGCCGTCATTCTCAACTTTATCAAAGGCCTTGTTGAGACGGTTAAAAATTTTATCATTC
CATTTGGCGTGGTGATTTTT

Product: YdbS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MRSEPKNQISRDGVKVWRITACITSFVLMLAAAGLIAAGVIFKWPVWIGILSAAVWLGISFVIIIMIPNIRHRVWRYEVH
ENEIDIQHGIFVVTRVIVPMVRVQHVDTSQGPILRKYNLASVQISTAATTHSIPALDVEEADQLRDSISRLARVTEDDV

Sequences:

>Translated_159_residues
MRSEPKNQISRDGVKVWRITACITSFVLMLAAAGLIAAGVIFKWPVWIGILSAAVWLGISFVIIIMIPNIRHRVWRYEVH
ENEIDIQHGIFVVTRVIVPMVRVQHVDTSQGPILRKYNLASVQISTAATTHSIPALDVEEADQLRDSISRLARVTEDDV
>Mature_159_residues
MRSEPKNQISRDGVKVWRITACITSFVLMLAAAGLIAAGVIFKWPVWIGILSAAVWLGISFVIIIMIPNIRHRVWRYEVH
ENEIDIQHGIFVVTRVIVPMVRVQHVDTSQGPILRKYNLASVQISTAATTHSIPALDVEEADQLRDSISRLARVTEDDV

Specific function: Unknown

COG id: COG3402

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 17849; Mature: 17849

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSEPKNQISRDGVKVWRITACITSFVLMLAAAGLIAAGVIFKWPVWIGILSAAVWLGIS
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVIIIMIPNIRHRVWRYEVHENEIDIQHGIFVVTRVIVPMVRVQHVDTSQGPILRKYNLA
HHHHHHCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
SVQISTAATTHSIPALDVEEADQLRDSISRLARVTEDDV
EEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSEPKNQISRDGVKVWRITACITSFVLMLAAAGLIAAGVIFKWPVWIGILSAAVWLGIS
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVIIIMIPNIRHRVWRYEVHENEIDIQHGIFVVTRVIVPMVRVQHVDTSQGPILRKYNLA
HHHHHHCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
SVQISTAATTHSIPALDVEEADQLRDSISRLARVTEDDV
EEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]