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The map label for this gene is yttP [H]

Identifier: 52140855

GI number: 52140855

Start: 4505349

End: 4505987

Strand: Reverse

Name: yttP [H]

Synonym: BCZK4396

Alternate gene names: 52140855

Gene position: 4505987-4505349 (Counterclockwise)

Preceding gene: 52140853

Following gene: 52140856

Centisome position: 85.0

GC content: 35.05

Gene sequence:

>639_bases
ATGAAACAGACGAAACAAAAAGTAATTGATGCGGCAATATCGTTGTTTAACACGAAAGGTTATGATGGAACGTCGGTGCG
AGACATTGCAAAGCGAGCGGATGTGAATGTAGCGAATATTTCATATTATTTTGCTGGAAAGCAAGGCCTATTAGAGCAGC
TTATTACTGATTTTTTAGAAGGGTATATTCATGTGATTGAAACGTCGTTTGAACAGAGAGAGTATTTGTCGGCTAAAGAT
GTGATGGTGCAAATGGTACGAGGGATTTTGCGATATCAATTTGAAAATAGGGAACTGACACGTTTTTTTTACCGAGAGCT
TTCGCTTGATACGACATTAATTCGTGAAGTGATGACCGTTTATTTTTCTAAAGAAAGATATTATATAGAGCAAATGATTA
GACAGGGACAAATGAAGCAAGAATTTAAAAAAGTATCTTTTACAATGTTTATGACGCAATTAAAAGGCATGGTGAATATG
CCGTTTTTATATCCGCAATATATATCAGAAGTGTTGCATTCTTTTCCATCTGAGACCTTTTTCTTAGAAATGTACACGAA
AGAAATTGAACAATGGATGGAACAAACATTATGTATAACGAATATGTACTATGAATGGCCAAGAGCTGTTCATATGTGA

Upstream 100 bases:

>100_bases
CGATGTATTTCACATGACTTTGTCGATAGAAAATTAAAGGAATTTGTCTTAAAAGTCAAGAAATTTAAACTATAGCTGTT
CAGTGAGAGGAAGTGAGCGC

Downstream 100 bases:

>100_bases
AAAATCCCCACCTAACGAACTGAGGTGGGGATTTTTGTGCTTTCTTTTCTTTGCCATAAATTGTTGCATAATAGCGCGAT
AATTGTTAACGAGGCTCCGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Stress response protein yttP [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKQTKQKVIDAAISLFNTKGYDGTSVRDIAKRADVNVANISYYFAGKQGLLEQLITDFLEGYIHVIETSFEQREYLSAKD
VMVQMVRGILRYQFENRELTRFFYRELSLDTTLIREVMTVYFSKERYYIEQMIRQGQMKQEFKKVSFTMFMTQLKGMVNM
PFLYPQYISEVLHSFPSETFFLEMYTKEIEQWMEQTLCITNMYYEWPRAVHM

Sequences:

>Translated_212_residues
MKQTKQKVIDAAISLFNTKGYDGTSVRDIAKRADVNVANISYYFAGKQGLLEQLITDFLEGYIHVIETSFEQREYLSAKD
VMVQMVRGILRYQFENRELTRFFYRELSLDTTLIREVMTVYFSKERYYIEQMIRQGQMKQEFKKVSFTMFMTQLKGMVNM
PFLYPQYISEVLHSFPSETFFLEMYTKEIEQWMEQTLCITNMYYEWPRAVHM
>Mature_212_residues
MKQTKQKVIDAAISLFNTKGYDGTSVRDIAKRADVNVANISYYFAGKQGLLEQLITDFLEGYIHVIETSFEQREYLSAKD
VMVQMVRGILRYQFENRELTRFFYRELSLDTTLIREVMTVYFSKERYYIEQMIRQGQMKQEFKKVSFTMFMTQLKGMVNM
PFLYPQYISEVLHSFPSETFFLEMYTKEIEQWMEQTLCITNMYYEWPRAVHM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 25474; Mature: 25474

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTKQKVIDAAISLFNTKGYDGTSVRDIAKRADVNVANISYYFAGKQGLLEQLITDFLE
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHH
GYIHVIETSFEQREYLSAKDVMVQMVRGILRYQFENRELTRFFYRELSLDTTLIREVMTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
YFSKERYYIEQMIRQGQMKQEFKKVSFTMFMTQLKGMVNMPFLYPQYISEVLHSFPSETF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH
FLEMYTKEIEQWMEQTLCITNMYYEWPRAVHM
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MKQTKQKVIDAAISLFNTKGYDGTSVRDIAKRADVNVANISYYFAGKQGLLEQLITDFLE
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHH
GYIHVIETSFEQREYLSAKDVMVQMVRGILRYQFENRELTRFFYRELSLDTTLIREVMTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
YFSKERYYIEQMIRQGQMKQEFKKVSFTMFMTQLKGMVNMPFLYPQYISEVLHSFPSETF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH
FLEMYTKEIEQWMEQTLCITNMYYEWPRAVHM
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 11988534 [H]