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The map label for this gene is yxdM [H]

Identifier: 52140665

GI number: 52140665

Start: 4673966

End: 4675939

Strand: Direct

Name: yxdM [H]

Synonym: BCZK4589

Alternate gene names: 52140665

Gene position: 4673966-4675939 (Clockwise)

Preceding gene: 52140666

Following gene: 52140664

Centisome position: 88.17

GC content: 31.91

Gene sequence:

>1974_bases
ATGACCTTTTGGCAATTTGCATTTAAAAACGTCACGCGCAACTCGAGAGCTTATTTTGCTTACTTTGTAAGTAGTTCTTT
TTCGATTGCCGTTTTCTTTTCATTTGCTGTTTACTTATTCCATCCGAAATTACAAAAATTTGGCATGGTCTCTGAAATTT
CAGGATTAATGATATTTTCAGAAGTAGTAATTGTATTTTTCTCTTTCTTCTTTTTACTATATTCCATTGGCACTTTTTTA
AAAGTTAGAAAAAAACAATTCGGCGTTTTGACCGTTTTAGGAATATCTAGAAAACAATTACATCGTCTTGTTTTTATGGA
GAATATGTTAATCGGTATTTTATCTATCTTTTTCGGTATGCAGTTTGGACTTGTCTTCTCGCAATTTTTCTTATTAGTGA
CAGCAAAAATTACGCACGTACCGGGCATATATTTATACTTACCTATTAACGCATTTATTTTAACGACAATCGTCTTCCTT
AGTCTTTTTATCGTTGTATCTACATTGACACCGATGCTCATTCGTACAAAAAAAGCGGTACACCTTTTAAAAATAAATAG
TAAAAAACGAAAAGAAAGAAAGCCGTCCATACTTATTTCTTTATTTGGTGCGATTTGTTTATTTGGTGGCTATGCGTTAG
CTGGAAATCCTAAATATTTCGTATCAGTAAGCCCACAAATAGGTGTTATATATATGGTTTCAAGTATTTTCGTCATTCCA
GCGCTCGTTACAATCGGTACATATTTCTTCTTTTCACAAATTAGTTTCTTACTTATTTATATTTTAAAGAAAAGAAGAAA
GTTTTATATGAAACAAATTAATATGCTTTGGATTTCTGATTTAGCAAACCGTATTCGAACGAATATTAATATGCTTTTTA
TTGTAGCAATGCTATCTACTATCGCTTTCACAATGATTACGTTTCTATATGGGTTCGGAAAATTTATTAAGCTAGACGTT
AATCGAACTTCGCCTTTCCCAATTTCTTATTTTTCTTATGATGCAAATCCTTTTGTTACAGAGCATTTAAATTGGCTTGA
GCAACAATTACAAAAAGAGCATTTTCCTTATGAGAAAATAACAGCTGATATATATGAAACACCGCTAAAAGAAGATAAAG
GTATAGCTATTTATAATGACGTATACGCAATTAAGCAAAGTGACTATAACAAACTTGCGGATTCTTTACGAATGAAACAA
CTATTTATGAATGATAACGAGGCATATGTTTTAACAGGGACGTCTTATATCACTATATTTAATGAATTTGAGCAAAGCTA
CAAAAGAGATTACATTACACTCTCTAGTACAAATACGAAATTAAAAGTTAAAGGCTATGAACAGATCCATGCAATTCCAT
CTAATTTTTCATATCAAACGATAGTTTTGCCTGATATTATCGTGAACAACTTACCTAACACAGTAAAGCATATATCGGCG
TACAATTACAAAATCCAAAACTGGGAACAGACATATGAAATCGCTAATACTTTTATAGAAAAGGTGCAAAAAGATCGCAA
TAAATCTCAGTATGAAGGACCTCTTATTCGCTCCTTTGAATCAGCAGGATCGTTATACAGAATAACATCTGGTAGTGCCG
CATACTTCCTAATTGGAACATTTTTAGGAGTTATTTTCTTCATTGGAGCCGGTAGCGTTCTTTACTTTAGAATGTATACA
GATTTGACGAACGAACAAGAGAAATATATAACGATTTCTAAGATCGGTGTGACAGATAAAGAGATGAAACGATCTGCAAC
CATTCAGCTTAGTATTTTATTTTTCGTTCCGTACATTATGGCATCCATTCATACAATGTTCGCAACGAAAATGCTACAAG
ATGTAATTGGCTTATCTTTGTTCAAGGAAGTTTCAGCCGTTCTTATTATTTTTGGATTCGTTGAAATCGTATTTTTCTTA
TTCATTCGTTCACTTTATATGCAAAAGCTATCACAATATACTAATACACATTAA

Upstream 100 bases:

>100_bases
GCATGATCGTGACATATGCAAGCAAAATGTATGAGAACTCACTCTCATACATTTTTTGCAATAAAACTACTTCTATATCT
TCTAACAGGAGGTATAATTT

Downstream 100 bases:

>100_bases
AAAGGTGGGATTTCTTCCCTCCTTCTTCATGCCCATTATATTAGGAGGTTTAGGTGAATGACATTTTGGCAGTTTGCATT
TAAAAACGTCACACGGAACG

Product: ABC transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MTFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQKFGMVSEISGLMIFSEVVIVFFSFFFLLYSIGTFL
KVRKKQFGVLTVLGISRKQLHRLVFMENMLIGILSIFFGMQFGLVFSQFFLLVTAKITHVPGIYLYLPINAFILTTIVFL
SLFIVVSTLTPMLIRTKKAVHLLKINSKKRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIGVIYMVSSIFVIP
ALVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINMLFIVAMLSTIAFTMITFLYGFGKFIKLDV
NRTSPFPISYFSYDANPFVTEHLNWLEQQLQKEHFPYEKITADIYETPLKEDKGIAIYNDVYAIKQSDYNKLADSLRMKQ
LFMNDNEAYVLTGTSYITIFNEFEQSYKRDYITLSSTNTKLKVKGYEQIHAIPSNFSYQTIVLPDIIVNNLPNTVKHISA
YNYKIQNWEQTYEIANTFIEKVQKDRNKSQYEGPLIRSFESAGSLYRITSGSAAYFLIGTFLGVIFFIGAGSVLYFRMYT
DLTNEQEKYITISKIGVTDKEMKRSATIQLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFL
FIRSLYMQKLSQYTNTH

Sequences:

>Translated_657_residues
MTFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQKFGMVSEISGLMIFSEVVIVFFSFFFLLYSIGTFL
KVRKKQFGVLTVLGISRKQLHRLVFMENMLIGILSIFFGMQFGLVFSQFFLLVTAKITHVPGIYLYLPINAFILTTIVFL
SLFIVVSTLTPMLIRTKKAVHLLKINSKKRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIGVIYMVSSIFVIP
ALVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINMLFIVAMLSTIAFTMITFLYGFGKFIKLDV
NRTSPFPISYFSYDANPFVTEHLNWLEQQLQKEHFPYEKITADIYETPLKEDKGIAIYNDVYAIKQSDYNKLADSLRMKQ
LFMNDNEAYVLTGTSYITIFNEFEQSYKRDYITLSSTNTKLKVKGYEQIHAIPSNFSYQTIVLPDIIVNNLPNTVKHISA
YNYKIQNWEQTYEIANTFIEKVQKDRNKSQYEGPLIRSFESAGSLYRITSGSAAYFLIGTFLGVIFFIGAGSVLYFRMYT
DLTNEQEKYITISKIGVTDKEMKRSATIQLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFL
FIRSLYMQKLSQYTNTH
>Mature_656_residues
TFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQKFGMVSEISGLMIFSEVVIVFFSFFFLLYSIGTFLK
VRKKQFGVLTVLGISRKQLHRLVFMENMLIGILSIFFGMQFGLVFSQFFLLVTAKITHVPGIYLYLPINAFILTTIVFLS
LFIVVSTLTPMLIRTKKAVHLLKINSKKRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIGVIYMVSSIFVIPA
LVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINMLFIVAMLSTIAFTMITFLYGFGKFIKLDVN
RTSPFPISYFSYDANPFVTEHLNWLEQQLQKEHFPYEKITADIYETPLKEDKGIAIYNDVYAIKQSDYNKLADSLRMKQL
FMNDNEAYVLTGTSYITIFNEFEQSYKRDYITLSSTNTKLKVKGYEQIHAIPSNFSYQTIVLPDIIVNNLPNTVKHISAY
NYKIQNWEQTYEIANTFIEKVQKDRNKSQYEGPLIRSFESAGSLYRITSGSAAYFLIGTFLGVIFFIGAGSVLYFRMYTD
LTNEQEKYITISKIGVTDKEMKRSATIQLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFLF
IRSLYMQKLSQYTNTH

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 76003; Mature: 75871

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQKFGMVSEISGLMIFS
CCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EVVIVFFSFFFLLYSIGTFLKVRKKQFGVLTVLGISRKQLHRLVFMENMLIGILSIFFGM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QFGLVFSQFFLLVTAKITHVPGIYLYLPINAFILTTIVFLSLFIVVSTLTPMLIRTKKAV
HHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLLKINSKKRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIGVIYMVSSIFVIP
EEEEECCHHHHHCCHHHHHHHHHHHHHHCCEEECCCCEEEEEECCCCHHHHHHHHHHHHH
ALVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINMLFIVAMLST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
IAFTMITFLYGFGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQQLQKEHFPYEKI
HHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHH
TADIYETPLKEDKGIAIYNDVYAIKQSDYNKLADSLRMKQLFMNDNEAYVLTGTSYITIF
HHHHHHCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEHH
NEFEQSYKRDYITLSSTNTKLKVKGYEQIHAIPSNFSYQTIVLPDIIVNNLPNTVKHISA
HHHHHHHCCCEEEEECCCCEEEEECHHHHHCCCCCCCEEEEEEHHHHHHCCCHHHHHHHH
YNYKIQNWEQTYEIANTFIEKVQKDRNKSQYEGPLIRSFESAGSLYRITSGSAAYFLIGT
CCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHH
FLGVIFFIGAGSVLYFRMYTDLTNEQEKYITISKIGVTDKEMKRSATIQLSILFFVPYIM
HHHHHHHHCCCHHEEEEEHHHCCCCCCCEEEEEECCCCHHHHHCCHHEEEHHHHHHHHHH
ASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFLFIRSLYMQKLSQYTNTH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQKFGMVSEISGLMIFS
CHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EVVIVFFSFFFLLYSIGTFLKVRKKQFGVLTVLGISRKQLHRLVFMENMLIGILSIFFGM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QFGLVFSQFFLLVTAKITHVPGIYLYLPINAFILTTIVFLSLFIVVSTLTPMLIRTKKAV
HHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLLKINSKKRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIGVIYMVSSIFVIP
EEEEECCHHHHHCCHHHHHHHHHHHHHHCCEEECCCCEEEEEECCCCHHHHHHHHHHHHH
ALVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINMLFIVAMLST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
IAFTMITFLYGFGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQQLQKEHFPYEKI
HHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHH
TADIYETPLKEDKGIAIYNDVYAIKQSDYNKLADSLRMKQLFMNDNEAYVLTGTSYITIF
HHHHHHCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEHH
NEFEQSYKRDYITLSSTNTKLKVKGYEQIHAIPSNFSYQTIVLPDIIVNNLPNTVKHISA
HHHHHHHCCCEEEEECCCCEEEEECHHHHHCCCCCCCEEEEEEHHHHHHCCCHHHHHHHH
YNYKIQNWEQTYEIANTFIEKVQKDRNKSQYEGPLIRSFESAGSLYRITSGSAAYFLIGT
CCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHH
FLGVIFFIGAGSVLYFRMYTDLTNEQEKYITISKIGVTDKEMKRSATIQLSILFFVPYIM
HHHHHHHHCCCHHEEEEEHHHCCCCCCCEEEEEECCCCHHHHHCCHHEEEHHHHHHHHHH
ASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFLFIRSLYMQKLSQYTNTH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]