| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is purR [H]
Identifier: 51894379
GI number: 51894379
Start: 3458877
End: 3459689
Strand: Reverse
Name: purR [H]
Synonym: STH3244
Alternate gene names: 51894379
Gene position: 3459689-3458877 (Counterclockwise)
Preceding gene: 51894380
Following gene: 51894378
Centisome position: 97.02
GC content: 70.48
Gene sequence:
>813_bases ATGAATCGGAGCCAGCGACTGGTGGCCATCATGAAACTGCTCTCCGAGCGGCCGGGAGAGCTCCTGCCGCTGAGCTTCTT CACCGAGCGGTTCGGTGCCGCCAAGTCCACCATTTCCGAGGACCTGGCCCTGGTGAAGGAGGCCCTGGAGGCCGACGGTT CAGGCCGCCTGCGCACGCACGCCGGGGCGGCGGGCGGGGTGCAGTACTGGCCGCTGCCCTCCCGGGAGGAGGAGCAGGAA ACCCTGCTGGAGCTCTGCCGGCTCCTGAGCGATCCGGGGCGGATCCTGCCCGGCGGGTTCGTCTACATGACCGATCTCAT CACCCACCCGATCTGGAGCGCCCGCATCGGGGCGATCATGGCCGCGCGGTTCATCGACGCCGAACCCGACGTCGTGCTCA CCGTAGAGACCAAGGGGATCCCCCTGGCCCTGATGGTCGCCCGCGCCCTGGGGCTGCCCATGGTGGTCGCCCGGCGCGAG GGCCGGGTGACGGAGGGGCCCTCCGTCACGCTCCACTACATCTCCGGATCCCGCCGCATCCACACCATGACGGTCGGCCT CCGGGCCCTGTGGCGCGGCGCCCGGGTCCTGGTGGTCGACGACTTCATGAAGGCGGGCGCGACCGCCCGCGCCATGGTGG ATGTGGCCGGCGAGATGGGCGCCTCCGTGGCCGGCGTGGGAGTCTTTGTCTCCACCGCGGAACCGGCCAGGAAGCAGGTG CAGCGCTACGTGTCGCTGCTCACGCTGGAGCAGGTGGACGAGGTGGCCCGCACGGTCCGGGTGGTTCCGGCCGACCGACT GACGAAGGAGTGA
Upstream 100 bases:
>100_bases GGGCATCGACGTGGACAAGCCGAGCGACCTGGGCCTGGTGGAGTCCCTTCTGAAATAGCGGGCCGTCCGGGGCGGACAGG GGGTGGCAGCGATCGATCGG
Downstream 100 bases:
>100_bases ACCGTGGGTGACGGTAACCTTTGCGGACATCGAGAAGGCGCGCATTCTGCTGAGCGGACACATCAAGCGGACACCCATGC TTCAGAGCCCTGGCATCACC
Product: pur operon repressor
Products: L-Glutamate; Diphosphate; 5-Phospho-beta-D-ribosylamine [C]
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MNRSQRLVAIMKLLSERPGELLPLSFFTERFGAAKSTISEDLALVKEALEADGSGRLRTHAGAAGGVQYWPLPSREEEQE TLLELCRLLSDPGRILPGGFVYMTDLITHPIWSARIGAIMAARFIDAEPDVVLTVETKGIPLALMVARALGLPMVVARRE GRVTEGPSVTLHYISGSRRIHTMTVGLRALWRGARVLVVDDFMKAGATARAMVDVAGEMGASVAGVGVFVSTAEPARKQV QRYVSLLTLEQVDEVARTVRVVPADRLTKE
Sequences:
>Translated_270_residues MNRSQRLVAIMKLLSERPGELLPLSFFTERFGAAKSTISEDLALVKEALEADGSGRLRTHAGAAGGVQYWPLPSREEEQE TLLELCRLLSDPGRILPGGFVYMTDLITHPIWSARIGAIMAARFIDAEPDVVLTVETKGIPLALMVARALGLPMVVARRE GRVTEGPSVTLHYISGSRRIHTMTVGLRALWRGARVLVVDDFMKAGATARAMVDVAGEMGASVAGVGVFVSTAEPARKQV QRYVSLLTLEQVDEVARTVRVVPADRLTKE >Mature_270_residues MNRSQRLVAIMKLLSERPGELLPLSFFTERFGAAKSTISEDLALVKEALEADGSGRLRTHAGAAGGVQYWPLPSREEEQE TLLELCRLLSDPGRILPGGFVYMTDLITHPIWSARIGAIMAARFIDAEPDVVLTVETKGIPLALMVARALGLPMVVARRE GRVTEGPSVTLHYISGSRRIHTMTVGLRALWRGARVLVVDDFMKAGATARAMVDVAGEMGASVAGVGVFVSTAEPARKQV QRYVSLLTLEQVDEVARTVRVVPADRLTKE
Specific function: Controls the transcription of the pur operon for purine biosynthetic genes, binds to the control region of the operon. DNA binding is inhibited by 5-phosphoribosyl 1-pyrophosphate [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR015265 - InterPro: IPR010078 - InterPro: IPR011991 - ProDom: PD029816 [H]
Pfam domain/function: PF00156 Pribosyltran; PF09182 PuR_N [H]
EC number: 2.4.2.14 [C]
Molecular weight: Translated: 29344; Mature: 29344
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSQRLVAIMKLLSERPGELLPLSFFTERFGAAKSTISEDLALVKEALEADGSGRLRTH CCCHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC AGAAGGVQYWPLPSREEEQETLLELCRLLSDPGRILPGGFVYMTDLITHPIWSARIGAIM CCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH AARFIDAEPDVVLTVETKGIPLALMVARALGLPMVVARREGRVTEGPSVTLHYISGSRRI HHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCEE HTMTVGLRALWRGARVLVVDDFMKAGATARAMVDVAGEMGASVAGVGVFVSTAEPARKQV EEHHHHHHHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHH QRYVSLLTLEQVDEVARTVRVVPADRLTKE HHHHHHHHHHHHHHHHHHHCCCCHHHCCCC >Mature Secondary Structure MNRSQRLVAIMKLLSERPGELLPLSFFTERFGAAKSTISEDLALVKEALEADGSGRLRTH CCCHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC AGAAGGVQYWPLPSREEEQETLLELCRLLSDPGRILPGGFVYMTDLITHPIWSARIGAIM CCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH AARFIDAEPDVVLTVETKGIPLALMVARALGLPMVVARREGRVTEGPSVTLHYISGSRRI HHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCEE HTMTVGLRALWRGARVLVVDDFMKAGATARAMVDVAGEMGASVAGVGVFVSTAEPARKQV EEHHHHHHHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHH QRYVSLLTLEQVDEVARTVRVVPADRLTKE HHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Mg-phosphoribosyldiphosphate Mg-phosphoribosyldiphosphate, [C]
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.067 {5-phospho-alpha-D-ribose} 1.7 {glutamine}} 8.8 {NH3}} [C]
Substrates: L-Glutamine; H2O; 5-Phospho-alpha-D-ribose 1-diphosphate [C]
Specific reaction: L-Glutamine + H2O + 5-Phospho-alpha-D-ribose 1-diphosphate --> L-Glutamate + Diphosphate + 5-Phospho-beta-D-ribosylamine [C]
General reaction: Pentosyl group transfer [C]
Inhibitor: 1, 10-Phenanthroline; 2-Mercaptoethanol; 6-Diazo-5-oxo-L-norleucine analogue [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377; 7638212 [H]