| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894380
Identifier: 51894380
GI number: 51894380
Start: 3459732
End: 3460487
Strand: Reverse
Name: 51894380
Synonym: STH3245
Alternate gene names: NA
Gene position: 3460487-3459732 (Counterclockwise)
Preceding gene: 51894381
Following gene: 51894379
Centisome position: 97.04
GC content: 66.14
Gene sequence:
>756_bases ATGGCCGTACACGTCATCGTCCTGGCCGGGGCCGCCAACGGCGGTCCGCTGCGGGAGGTCAGCTCCGCACCCAACGAGGC GCTCGTCGAGATCAATGGCAAGCCCATGATTCAGTACGTCATCGATGCACTGCAGGAGGCCAGGTCGATCGGGCGGATCG TGATCGTCGCCCCGCCCGGGCAGCTGGAGCCCCACGTGTCCGGCCGCAACCTCGAGTTCGTGCCCAGCCGAGACCACATT GTCGACAACATCCTGGAGGCGCTGAAAGTCCTGCAGCCGGAGGACCGGTTCCTGGTGATCAGCAGCGATGTGCCCCTGAT CACGGGCCAGATCGTAGACGACCTGATCGCCCTGTGCGCGCAGCGGCCGGCCGACCTGTACTATCCGATCGTGGAGCGCA AGGTCGCCGAGGAGCGGTACCCGGGCGTCCAGCGCACGTACGTCAGGCTGCGGGAGGGAACCTTCACGGGCGGGAACGTG TTCCTCGTCCACCCCTCCATCGTTGACCGGGTGGCGCCGAAGGTCCGGGCGTTCCTGGACTACCGCAAGAGCCCGCTCAA GATGGTCAGCCTGCTGGGGTGGGGGTTCACCCTGCGATACCTGCTCCTGCGCAACCTGAGCCTCAGGGAGTTGGAGGAGA AGGTCTCGCGCATGCTGGACATCAACGGGGCCGTGGTGGTCTGCCCGTGGCCTGAGGTGGGCATCGACGTGGACAAGCCG AGCGACCTGGGCCTGGTGGAGTCCCTTCTGAAATAG
Upstream 100 bases:
>100_bases TGAGGGTTCTGGGCGACGCCGGCAGGAACTCCGTCGGCGCGCCGAGAAGCAAACTGTTTGTTTCGTCCATAAACTTCTGG GCATCGAGGAGAGATCGGGC
Downstream 100 bases:
>100_bases CGGGCCGTCCGGGGCGGACAGGGGGTGGCAGCGATCGATCGGATGAATCGGAGCCAGCGACTGGTGGCCATCATGAAACT GCTCTCCGAGCGGCCGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MAVHVIVLAGAANGGPLREVSSAPNEALVEINGKPMIQYVIDALQEARSIGRIVIVAPPGQLEPHVSGRNLEFVPSRDHI VDNILEALKVLQPEDRFLVISSDVPLITGQIVDDLIALCAQRPADLYYPIVERKVAEERYPGVQRTYVRLREGTFTGGNV FLVHPSIVDRVAPKVRAFLDYRKSPLKMVSLLGWGFTLRYLLLRNLSLRELEEKVSRMLDINGAVVVCPWPEVGIDVDKP SDLGLVESLLK
Sequences:
>Translated_251_residues MAVHVIVLAGAANGGPLREVSSAPNEALVEINGKPMIQYVIDALQEARSIGRIVIVAPPGQLEPHVSGRNLEFVPSRDHI VDNILEALKVLQPEDRFLVISSDVPLITGQIVDDLIALCAQRPADLYYPIVERKVAEERYPGVQRTYVRLREGTFTGGNV FLVHPSIVDRVAPKVRAFLDYRKSPLKMVSLLGWGFTLRYLLLRNLSLRELEEKVSRMLDINGAVVVCPWPEVGIDVDKP SDLGLVESLLK >Mature_250_residues AVHVIVLAGAANGGPLREVSSAPNEALVEINGKPMIQYVIDALQEARSIGRIVIVAPPGQLEPHVSGRNLEFVPSRDHIV DNILEALKVLQPEDRFLVISSDVPLITGQIVDDLIALCAQRPADLYYPIVERKVAEERYPGVQRTYVRLREGTFTGGNVF LVHPSIVDRVAPKVRAFLDYRKSPLKMVSLLGWGFTLRYLLLRNLSLRELEEKVSRMLDINGAVVVCPWPEVGIDVDKPS DLGLVESLLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27801; Mature: 27670
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVHVIVLAGAANGGPLREVSSAPNEALVEINGKPMIQYVIDALQEARSIGRIVIVAPPG CEEEEEEEEECCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCCC QLEPHVSGRNLEFVPSRDHIVDNILEALKVLQPEDRFLVISSDVPLITGQIVDDLIALCA CCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHH QRPADLYYPIVERKVAEERYPGVQRTYVRLREGTFTGGNVFLVHPSIVDRVAPKVRAFLD CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHH YRKSPLKMVSLLGWGFTLRYLLLRNLSLRELEEKVSRMLDINGAVVVCPWPEVGIDVDKP HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC SDLGLVESLLK CCCHHHHHHHC >Mature Secondary Structure AVHVIVLAGAANGGPLREVSSAPNEALVEINGKPMIQYVIDALQEARSIGRIVIVAPPG EEEEEEEEECCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCCC QLEPHVSGRNLEFVPSRDHIVDNILEALKVLQPEDRFLVISSDVPLITGQIVDDLIALCA CCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHH QRPADLYYPIVERKVAEERYPGVQRTYVRLREGTFTGGNVFLVHPSIVDRVAPKVRAFLD CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHH YRKSPLKMVSLLGWGFTLRYLLLRNLSLRELEEKVSRMLDINGAVVVCPWPEVGIDVDKP HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC SDLGLVESLLK CCCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA