| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is fchA [H]
Identifier: 51894325
GI number: 51894325
Start: 3398190
End: 3398837
Strand: Reverse
Name: fchA [H]
Synonym: STH3190
Alternate gene names: 51894325
Gene position: 3398837-3398190 (Counterclockwise)
Preceding gene: 51894326
Following gene: 51894324
Centisome position: 95.31
GC content: 71.91
Gene sequence:
>648_bases ATGCGCATCGGTGAACAGACGGTCAAGGGGTTCTGCGAGCAGGTGGCGGCCTCGACGCCGGCCCCCGGCGGCGGCACGGT GGCCGCCGTGGCCGGGGCCATGGGGGCCAGCCTGGTCGCCATGGTGGCGGGCCTGACCCGGGGGCGGGAGAAGTTCCGGG ACGTGGAGGCGGACATGGCGGCCGCCCAGGAAGCGGGCTTGAAGGAGGCGGAGGCGCTCCTCGGCCTGGCCGACCAGGAC CAGGCGGCGTTCAACCAGGTGATGGCGGCGTTCGCCCTGCCCAAGGGCACGCCGGAGGAGAAGTCGGCGCGTCGGCAGGC GGTCCAGGCGGCCTACCGGGAGGCGACCCGCACGCCGCTGGAGACCATGGATCACTGCCTGGCGGTGATGCGGCACGCGC TGGCGGCGGTGGCCCGGGGCAACCCCAACGCTGCCAGCGACGCGGTGGTGGGGCTCCTGATGGCGTCGGCGGGCTTCGAG GGGGCCCTGTGGAACGTGGCGATCAACCTCGGCTCCATTACGGATGAAGCCTTCCGTCAGGAGACGCTGGAACAGGTGGA GCGCATGCGTGCGGAACGGGAGGAGGTGCTGCAGGCCTTCCACAGCCTGGTTCCGGATCCGGTGGTGCGGTTCCTGAAGC AGCAGTAG
Upstream 100 bases:
>100_bases CATTCCCTACCACATGGGCATGGGTGTCGTGGCCAAGGTCGTGAAGCGGGGCAGGCTCATTGTGGACGAGGGAAAGGTAC GCAGGAGGTAGCGGTAGCCC
Downstream 100 bases:
>100_bases CAGTCCAGCGGAGTGACCAGTGGAGGAGGAACGGACCTTGCTCTCCGACATCGCAATTGCGCAGCGTGCACGGCTTGAAC CGATCACGAAGGTGGCAGAG
Product: formiminotetrahydrofolate cyclodeaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MRIGEQTVKGFCEQVAASTPAPGGGTVAAVAGAMGASLVAMVAGLTRGREKFRDVEADMAAAQEAGLKEAEALLGLADQD QAAFNQVMAAFALPKGTPEEKSARRQAVQAAYREATRTPLETMDHCLAVMRHALAAVARGNPNAASDAVVGLLMASAGFE GALWNVAINLGSITDEAFRQETLEQVERMRAEREEVLQAFHSLVPDPVVRFLKQQ
Sequences:
>Translated_215_residues MRIGEQTVKGFCEQVAASTPAPGGGTVAAVAGAMGASLVAMVAGLTRGREKFRDVEADMAAAQEAGLKEAEALLGLADQD QAAFNQVMAAFALPKGTPEEKSARRQAVQAAYREATRTPLETMDHCLAVMRHALAAVARGNPNAASDAVVGLLMASAGFE GALWNVAINLGSITDEAFRQETLEQVERMRAEREEVLQAFHSLVPDPVVRFLKQQ >Mature_215_residues MRIGEQTVKGFCEQVAASTPAPGGGTVAAVAGAMGASLVAMVAGLTRGREKFRDVEADMAAAQEAGLKEAEALLGLADQD QAAFNQVMAAFALPKGTPEEKSARRQAVQAAYREATRTPLETMDHCLAVMRHALAAVARGNPNAASDAVVGLLMASAGFE GALWNVAINLGSITDEAFRQETLEQVERMRAEREEVLQAFHSLVPDPVVRFLKQQ
Specific function: Required for both C1 and C2 metabolism [H]
COG id: COG3404
COG function: function code E; Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyclodeaminase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI46255035, Length=191, Percent_Identity=38.7434554973822, Blast_Score=81, Evalue=6e-16, Organism=Homo sapiens, GI11140815, Length=191, Percent_Identity=38.7434554973822, Blast_Score=81, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007044 [H]
Pfam domain/function: PF04961 FTCD_C [H]
EC number: =3.5.4.9 [H]
Molecular weight: Translated: 22749; Mature: 22749
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGEQTVKGFCEQVAASTPAPGGGTVAAVAGAMGASLVAMVAGLTRGREKFRDVEADMA CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAQEAGLKEAEALLGLADQDQAAFNQVMAAFALPKGTPEEKSARRQAVQAAYREATRTPL HHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHH ETMDHCLAVMRHALAAVARGNPNAASDAVVGLLMASAGFEGALWNVAINLGSITDEAFRQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHH ETLEQVERMRAEREEVLQAFHSLVPDPVVRFLKQQ HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MRIGEQTVKGFCEQVAASTPAPGGGTVAAVAGAMGASLVAMVAGLTRGREKFRDVEADMA CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAQEAGLKEAEALLGLADQDQAAFNQVMAAFALPKGTPEEKSARRQAVQAAYREATRTPL HHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHH ETMDHCLAVMRHALAAVARGNPNAASDAVVGLLMASAGFEGALWNVAINLGSITDEAFRQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHH ETLEQVERMRAEREEVLQAFHSLVPDPVVRFLKQQ HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7961516; 10215859 [H]