| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is fhs
Identifier: 51894324
GI number: 51894324
Start: 3396482
End: 3398152
Strand: Reverse
Name: fhs
Synonym: STH3189
Alternate gene names: 51894324
Gene position: 3398152-3396482 (Counterclockwise)
Preceding gene: 51894325
Following gene: 51894323
Centisome position: 95.29
GC content: 68.76
Gene sequence:
>1671_bases TTGCTCTCCGACATCGCAATTGCGCAGCGTGCACGGCTTGAACCGATCACGAAGGTGGCAGAGCAGATCGGACTGGGTCC CGAAGACCTGGAGCTGTACGGCCGCTATAAGGCCAAGGTGGCCGACCACGTGTGGCCCCGCGTGAGGTCCAACCCCGACG GCAAGCTGATCCTGGTCACCGCCATCAGCCCGACGCCTGCCGGCGAGGGCAAGACCACGGTGACGGTGGGCCTGGGCCAG GCGATGTCCCGCATCGGGAAGCGGGCGATCATCGCCCTCCGGGAGCCCTCGCTGGGGCCGGCGTTCGGCGTGAAGGGCGG CGCGGCCGGCGGCGGCTACTCGCAGGTCGTTCCCATGGATGAGATCAACCTGCACTTCACCGGCGACTTCCACGCCGTGA CGGCGGCCAACAACCTGCTGGCGGCGATGATCGACAACCACCTCCACCAGGGCAACAAACTGGGCCTCGACCCGCGGCAG ATCACCTTCAAGCGGGTCCTGGACATGAACGACCGGGCCCTGCGGTCCGTGGTCATCGGTCTCGGCGGCAAGAACGGCGG CGTGCCGCGCCAGGAGGAGTTCATGATCACCCCGGCGTCGGAGGTCATGGCGACGCTCTGCCTGGCGGAGGACCTGGCCG ACCTGAAGCGACGCTGCGGTGAGATCATCGTCGGCTACACCTACGACGGCGCCCCGGTGCGGGCCCGGGACCTGAAGGCG GAAGGGGCGATGGCCACCCTCCTGAAGGAAGCCATCAAGCCCAACCTGGTGCAGACGCTGGAGAACACTCCGGCCTTCGT GCACGGCGGGCCCTTCGCCAACATCGCCCACGGGTGCAACACCGTCGTGGCGACCCGGCTCGCCCTGAAGCTGGCCGACT ACGTGATCACGGAGGCCGGCTTCGGTGCGGACCTGGGGGCGGAGAAGTTCATTGACATCAAGTGCCGGCTCTCCGGGCTG CGCCCCGACGCCGTGGTGGTGGTGGCCACCATCCGCTCGCTGAAGATGCACGGCGGCCTGAAGAAGGACGATCTGGCCCG GGAGGACCTGGAGGCCCTGCAGCGGGGCAGCGCCAACCTCATGCGTCACCTCCGCAACGTGACCGAGGTCTTCGGACTGC CGGCGGTCGTCGCGATCAACCGTTTTGCGGCCGACACCGAAGCCGAGATTGCCCTGCTGCGGGCACTGGTGGAGGAGGCC GGCGCCACGGCCGTGGTGGCGGACGTCCACGCCCGGGGCGGCGACGGCGGCATCGAGCTGGCGCAGCGGGTGGTGGAGCT GGTTGAACAGCCGAACCGGTTCCGCTTCGCCTACGACGACGAGGACAGCCTGAAGACCAAGATCGAGAAGGTCGCCACGC GGATCTACGGCGCCGACGGCGTCGATTTTACCCGGGAGGCCAGCCGCATGCTGAAGAAGCTGGAGAGCGAGGGCTTCGGC CGCGCACCGGTCTGCATCGCGAAGACCCAGTACTCGTTCTCCGACGACCCCAAGAAGTTGGGCGCGCCCACGGGCTGGCG GCTGACCGTCCGCGAGGTGCGGCCCAGCGCCGGCGCGGGCTTCGTGGTGGCGCTCACCGGCGAGATCATGACCATGCCCG GCCTGCCGCCGGTGCCCGCCGCGGAGAGCATCGACGTCTCCGACGACGGGGAGATCACAGGGCTGTTCTAG
Upstream 100 bases:
>100_bases GTGCTGCAGGCCTTCCACAGCCTGGTTCCGGATCCGGTGGTGCGGTTCCTGAAGCAGCAGTAGCAGTCCAGCGGAGTGAC CAGTGGAGGAGGAACGGACC
Downstream 100 bases:
>100_bases CCGGACCGGGCGCTGTTCGCTTCCGCAGGAAGGGAGAGGCGGAGGCCGGGGCGAATCCCTCCCCGGCCTTCGCACATTCA GAGACGAGGTGACCTGAATC
Product: formate-tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MLSDIAIAQRARLEPITKVAEQIGLGPEDLELYGRYKAKVADHVWPRVRSNPDGKLILVTAISPTPAGEGKTTVTVGLGQ AMSRIGKRAIIALREPSLGPAFGVKGGAAGGGYSQVVPMDEINLHFTGDFHAVTAANNLLAAMIDNHLHQGNKLGLDPRQ ITFKRVLDMNDRALRSVVIGLGGKNGGVPRQEEFMITPASEVMATLCLAEDLADLKRRCGEIIVGYTYDGAPVRARDLKA EGAMATLLKEAIKPNLVQTLENTPAFVHGGPFANIAHGCNTVVATRLALKLADYVITEAGFGADLGAEKFIDIKCRLSGL RPDAVVVVATIRSLKMHGGLKKDDLAREDLEALQRGSANLMRHLRNVTEVFGLPAVVAINRFAADTEAEIALLRALVEEA GATAVVADVHARGGDGGIELAQRVVELVEQPNRFRFAYDDEDSLKTKIEKVATRIYGADGVDFTREASRMLKKLESEGFG RAPVCIAKTQYSFSDDPKKLGAPTGWRLTVREVRPSAGAGFVVALTGEIMTMPGLPPVPAAESIDVSDDGEITGLF
Sequences:
>Translated_556_residues MLSDIAIAQRARLEPITKVAEQIGLGPEDLELYGRYKAKVADHVWPRVRSNPDGKLILVTAISPTPAGEGKTTVTVGLGQ AMSRIGKRAIIALREPSLGPAFGVKGGAAGGGYSQVVPMDEINLHFTGDFHAVTAANNLLAAMIDNHLHQGNKLGLDPRQ ITFKRVLDMNDRALRSVVIGLGGKNGGVPRQEEFMITPASEVMATLCLAEDLADLKRRCGEIIVGYTYDGAPVRARDLKA EGAMATLLKEAIKPNLVQTLENTPAFVHGGPFANIAHGCNTVVATRLALKLADYVITEAGFGADLGAEKFIDIKCRLSGL RPDAVVVVATIRSLKMHGGLKKDDLAREDLEALQRGSANLMRHLRNVTEVFGLPAVVAINRFAADTEAEIALLRALVEEA GATAVVADVHARGGDGGIELAQRVVELVEQPNRFRFAYDDEDSLKTKIEKVATRIYGADGVDFTREASRMLKKLESEGFG RAPVCIAKTQYSFSDDPKKLGAPTGWRLTVREVRPSAGAGFVVALTGEIMTMPGLPPVPAAESIDVSDDGEITGLF >Mature_556_residues MLSDIAIAQRARLEPITKVAEQIGLGPEDLELYGRYKAKVADHVWPRVRSNPDGKLILVTAISPTPAGEGKTTVTVGLGQ AMSRIGKRAIIALREPSLGPAFGVKGGAAGGGYSQVVPMDEINLHFTGDFHAVTAANNLLAAMIDNHLHQGNKLGLDPRQ ITFKRVLDMNDRALRSVVIGLGGKNGGVPRQEEFMITPASEVMATLCLAEDLADLKRRCGEIIVGYTYDGAPVRARDLKA EGAMATLLKEAIKPNLVQTLENTPAFVHGGPFANIAHGCNTVVATRLALKLADYVITEAGFGADLGAEKFIDIKCRLSGL RPDAVVVVATIRSLKMHGGLKKDDLAREDLEALQRGSANLMRHLRNVTEVFGLPAVVAINRFAADTEAEIALLRALVEEA GATAVVADVHARGGDGGIELAQRVVELVEQPNRFRFAYDDEDSLKTKIEKVATRIYGADGVDFTREASRMLKKLESEGFG RAPVCIAKTQYSFSDDPKKLGAPTGWRLTVREVRPSAGAGFVVALTGEIMTMPGLPPVPAAESIDVSDDGEITGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=620, Percent_Identity=44.6774193548387, Blast_Score=479, Evalue=1e-135, Organism=Homo sapiens, GI36796743, Length=620, Percent_Identity=44.1935483870968, Blast_Score=461, Evalue=1e-130, Organism=Homo sapiens, GI310124614, Length=81, Percent_Identity=39.5061728395062, Blast_Score=70, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17568737, Length=624, Percent_Identity=44.8717948717949, Blast_Score=465, Evalue=1e-131, Organism=Caenorhabditis elegans, GI17568739, Length=624, Percent_Identity=44.8717948717949, Blast_Score=465, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6319558, Length=631, Percent_Identity=42.4722662440571, Blast_Score=474, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6321643, Length=626, Percent_Identity=44.5686900958466, Blast_Score=473, Evalue=1e-134, Organism=Drosophila melanogaster, GI24645718, Length=620, Percent_Identity=43.8709677419355, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI17137370, Length=620, Percent_Identity=43.8709677419355, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI62472483, Length=620, Percent_Identity=43.8709677419355, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI45551871, Length=620, Percent_Identity=43.8709677419355, Blast_Score=469, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTHS_SYMTH (Q67JH9)
Other databases:
- EMBL: AP006840 - RefSeq: YP_077015.1 - ProteinModelPortal: Q67JH9 - SMR: Q67JH9 - GeneID: 2981679 - GenomeReviews: AP006840_GR - KEGG: sth:STH3189 - NMPDR: fig|292459.1.peg.3060 - HOGENOM: HBG677721 - OMA: KMPGLPK - BioCyc: STHE292459:STH3189-MONOMER - BRENDA: 6.3.4.3 - HAMAP: MF_01543 - InterPro: IPR000559 - InterPro: IPR020628
Pfam domain/function: PF01268 FTHFS
EC number: =6.3.4.3
Molecular weight: Translated: 59451; Mature: 59451
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00721 FTHFS_1; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDIAIAQRARLEPITKVAEQIGLGPEDLELYGRYKAKVADHVWPRVRSNPDGKLILVT CCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE AISPTPAGEGKTTVTVGLGQAMSRIGKRAIIALREPSLGPAFGVKGGAAGGGYSQVVPMD EECCCCCCCCCEEEEEEHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC EINLHFTGDFHAVTAANNLLAAMIDNHLHQGNKLGLDPRQITFKRVLDMNDRALRSVVIG CCEEEEECCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHEE LGGKNGGVPRQEEFMITPASEVMATLCLAEDLADLKRRCGEIIVGYTYDGAPVRARDLKA CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCC EGAMATLLKEAIKPNLVQTLENTPAFVHGGPFANIAHGCNTVVATRLALKLADYVITEAG CHHHHHHHHHHHCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC FGADLGAEKFIDIKCRLSGLRPDAVVVVATIRSLKMHGGLKKDDLAREDLEALQRGSANL CCCCCCCCCEEEEEEEECCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH MRHLRNVTEVFGLPAVVAINRFAADTEAEIALLRALVEEAGATAVVADVHARGGDGGIEL HHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHH AQRVVELVEQPNRFRFAYDDEDSLKTKIEKVATRIYGADGVDFTREASRMLKKLESEGFG HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC RAPVCIAKTQYSFSDDPKKLGAPTGWRLTVREVRPSAGAGFVVALTGEIMTMPGLPPVPA CCCEEEEEECCCCCCCHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCEEECCCCCCCCC AESIDVSDDGEITGLF CCCCCCCCCCCEEECC >Mature Secondary Structure MLSDIAIAQRARLEPITKVAEQIGLGPEDLELYGRYKAKVADHVWPRVRSNPDGKLILVT CCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE AISPTPAGEGKTTVTVGLGQAMSRIGKRAIIALREPSLGPAFGVKGGAAGGGYSQVVPMD EECCCCCCCCCEEEEEEHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC EINLHFTGDFHAVTAANNLLAAMIDNHLHQGNKLGLDPRQITFKRVLDMNDRALRSVVIG CCEEEEECCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHEE LGGKNGGVPRQEEFMITPASEVMATLCLAEDLADLKRRCGEIIVGYTYDGAPVRARDLKA CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCC EGAMATLLKEAIKPNLVQTLENTPAFVHGGPFANIAHGCNTVVATRLALKLADYVITEAG CHHHHHHHHHHHCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC FGADLGAEKFIDIKCRLSGLRPDAVVVVATIRSLKMHGGLKKDDLAREDLEALQRGSANL CCCCCCCCCEEEEEEEECCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH MRHLRNVTEVFGLPAVVAINRFAADTEAEIALLRALVEEAGATAVVADVHARGGDGGIEL HHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHH AQRVVELVEQPNRFRFAYDDEDSLKTKIEKVATRIYGADGVDFTREASRMLKKLESEGFG HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC RAPVCIAKTQYSFSDDPKKLGAPTGWRLTVREVRPSAGAGFVVALTGEIMTMPGLPPVPA CCCEEEEEECCCCCCCHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCEEECCCCCCCCC AESIDVSDDGEITGLF CCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA