Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894267

Identifier: 51894267

GI number: 51894267

Start: 3331826

End: 3332953

Strand: Reverse

Name: 51894267

Synonym: STH3132

Alternate gene names: NA

Gene position: 3332953-3331826 (Counterclockwise)

Preceding gene: 51894268

Following gene: 51894266

Centisome position: 93.46

GC content: 70.92

Gene sequence:

>1128_bases
GTGTCGCTGAATCGTCTCTGGTCAGGGAGGTGGGGCGTGACCCTCACCGGCGTTGTCGTTGGGATCCTGGCGCCCATCCT
GGTGAAGCTGGGCAACCCCGGGAACATGGGGGTGTGCGTCGCCTGTTTCACCCGTGACATCGCGGGCGCCCTCGGGCTGC
ACCGGGCTGCGGCCGTGCAGTACATCCGGCCCGAGATCATCGGCCTGGTCCTGGGTGCGACGATCGCCGCGCTGGGCGCC
GGCGAGTGGCGCGCCCGGGGCGGCTCCTCGCCGCTGGTGCGGTACATCATGGGCGTCATCGCCGCGATCGGCGCGCTGGT
CTTCCTCGGCTGTCCGTGGCGGGCGTTCCTGCGGATCGGCGGCGGCGACTGGAACGCCGTCGTCGGCGTCCTCGGTTTCG
CCGCAGGCATCTGGGCGGCCACCTTCTTCCTGCGCCGGGGCTACAGCCTGGGCAAGAGCAAGCCGATGGCGCCGGTCGCC
GGCTGGATCATGCCGGCGGCCATGGTCGGCCTCCTGGTGCTCCTCCTGGCGGCGCCGCTGTTCGGGCGGGACGCCGACGG
GAACCCGGTGGGCCCGATCTTCTTCAGCACCAGCGGTCCGGGCTCGCAGCACGCCGCCTGGTGGATCTCGCTCCTGTTCG
CCCTGGTCATCGGGTACCTGGGGCAGCGGAGCCGCTTCTGTTCGGTGGGGGCGTTCAGAAATCTGTTCATGCTGCGTGAC
ACCAAGCTGCTGACGGGCGTCGTCGCCCTGATCATAACCGCCGCGGTGGCGAACCTGGCCCTGGGCCAGTTCCACCCGGG
CTTCGCCAACCAGCCCATCGCCCATACGGACGGGCTCTGGAACTTCATGGGCATGCTGCTCTCCGGCCTGGCCTTCACGC
TCGGCGGCGGCTGCCCCGGCCGGCAGCTCTTCCTCTCCGGCGAGGGCGACACCGACGCGGCGGTCTTCACCTTCGGACTG
CTGACCGGCACCGCCCTGGCGCACAACTTCAACCTGGCCAGCTCGGCCGCGGGGCCGTCGCCCTACGGGCCGGCGGCGGT
GATCATCGGGCTCATCGTCGTGGTCGTCCTGGGCTTCACCATGCGGGACGTGGCGGCGGGTGAGGACCAGTCCCGGTCGG
CGGCATGA

Upstream 100 bases:

>100_bases
TGCTGGGGGACCGGCGCCTGCCTTGCTTTTTCTGTTGGAGGATTCAGGTATCGGACGTCAAAGATTACTACCAATCATCC
TTAAGGGAGGCGCATGAGTT

Downstream 100 bases:

>100_bases
GCGCCGAACTGATTTACCTGGACAACGCCGCCACCTCGTGGCCCAAGCCGGCGGCGGTGGTGCGGGCGATGGCCGAGTGC
CTGGAGAATGAGGCCGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MSLNRLWSGRWGVTLTGVVVGILAPILVKLGNPGNMGVCVACFTRDIAGALGLHRAAAVQYIRPEIIGLVLGATIAALGA
GEWRARGGSSPLVRYIMGVIAAIGALVFLGCPWRAFLRIGGGDWNAVVGVLGFAAGIWAATFFLRRGYSLGKSKPMAPVA
GWIMPAAMVGLLVLLLAAPLFGRDADGNPVGPIFFSTSGPGSQHAAWWISLLFALVIGYLGQRSRFCSVGAFRNLFMLRD
TKLLTGVVALIITAAVANLALGQFHPGFANQPIAHTDGLWNFMGMLLSGLAFTLGGGCPGRQLFLSGEGDTDAAVFTFGL
LTGTALAHNFNLASSAAGPSPYGPAAVIIGLIVVVVLGFTMRDVAAGEDQSRSAA

Sequences:

>Translated_375_residues
MSLNRLWSGRWGVTLTGVVVGILAPILVKLGNPGNMGVCVACFTRDIAGALGLHRAAAVQYIRPEIIGLVLGATIAALGA
GEWRARGGSSPLVRYIMGVIAAIGALVFLGCPWRAFLRIGGGDWNAVVGVLGFAAGIWAATFFLRRGYSLGKSKPMAPVA
GWIMPAAMVGLLVLLLAAPLFGRDADGNPVGPIFFSTSGPGSQHAAWWISLLFALVIGYLGQRSRFCSVGAFRNLFMLRD
TKLLTGVVALIITAAVANLALGQFHPGFANQPIAHTDGLWNFMGMLLSGLAFTLGGGCPGRQLFLSGEGDTDAAVFTFGL
LTGTALAHNFNLASSAAGPSPYGPAAVIIGLIVVVVLGFTMRDVAAGEDQSRSAA
>Mature_374_residues
SLNRLWSGRWGVTLTGVVVGILAPILVKLGNPGNMGVCVACFTRDIAGALGLHRAAAVQYIRPEIIGLVLGATIAALGAG
EWRARGGSSPLVRYIMGVIAAIGALVFLGCPWRAFLRIGGGDWNAVVGVLGFAAGIWAATFFLRRGYSLGKSKPMAPVAG
WIMPAAMVGLLVLLLAAPLFGRDADGNPVGPIFFSTSGPGSQHAAWWISLLFALVIGYLGQRSRFCSVGAFRNLFMLRDT
KLLTGVVALIITAAVANLALGQFHPGFANQPIAHTDGLWNFMGMLLSGLAFTLGGGCPGRQLFLSGEGDTDAAVFTFGLL
TGTALAHNFNLASSAAGPSPYGPAAVIIGLIVVVVLGFTMRDVAAGEDQSRSAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38823; Mature: 38692

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNRLWSGRWGVTLTGVVVGILAPILVKLGNPGNMGVCVACFTRDIAGALGLHRAAAVQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YIRPEIIGLVLGATIAALGAGEWRARGGSSPLVRYIMGVIAAIGALVFLGCPWRAFLRIG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHEEC
GGDWNAVVGVLGFAAGIWAATFFLRRGYSLGKSKPMAPVAGWIMPAAMVGLLVLLLAAPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
FGRDADGNPVGPIFFSTSGPGSQHAAWWISLLFALVIGYLGQRSRFCSVGAFRNLFMLRD
CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TKLLTGVVALIITAAVANLALGQFHPGFANQPIAHTDGLWNFMGMLLSGLAFTLGGGCPG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
RQLFLSGEGDTDAAVFTFGLLTGTALAHNFNLASSAAGPSPYGPAAVIIGLIVVVVLGFT
CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH
MRDVAAGEDQSRSAA
HHHHHCCCCCCCCCC
>Mature Secondary Structure 
SLNRLWSGRWGVTLTGVVVGILAPILVKLGNPGNMGVCVACFTRDIAGALGLHRAAAVQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YIRPEIIGLVLGATIAALGAGEWRARGGSSPLVRYIMGVIAAIGALVFLGCPWRAFLRIG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHEEC
GGDWNAVVGVLGFAAGIWAATFFLRRGYSLGKSKPMAPVAGWIMPAAMVGLLVLLLAAPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
FGRDADGNPVGPIFFSTSGPGSQHAAWWISLLFALVIGYLGQRSRFCSVGAFRNLFMLRD
CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TKLLTGVVALIITAAVANLALGQFHPGFANQPIAHTDGLWNFMGMLLSGLAFTLGGGCPG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
RQLFLSGEGDTDAAVFTFGLLTGTALAHNFNLASSAAGPSPYGPAAVIIGLIVVVVLGFT
CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH
MRDVAAGEDQSRSAA
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA