| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893703
Identifier: 51893703
GI number: 51893703
Start: 2753688
End: 2754107
Strand: Reverse
Name: 51893703
Synonym: STH2565
Alternate gene names: NA
Gene position: 2754107-2753688 (Counterclockwise)
Preceding gene: 51893704
Following gene: 51893702
Centisome position: 77.23
GC content: 66.43
Gene sequence:
>420_bases ATGGCGAGGGCGGGCGAGATCCGCTACGAGGTTCACTACCTGCCGATCTTCCCGGCGACCGGCCCGGCCATCTTCGCGGT GCAGTGCGCCGGCGAGCAGGGCTACTGGTGGGCAATGCACGGCCGCATCCTGGAGGATCAGACGCGAGGGATCCGCGCCG TCCAGACCCTCGACGATCTGGACGCGCTGCTGGCGCGCTACGCGGAGGAACTGGGGCTGGACATGGCGGCGTACCGCCAG TGCCTGGCCTCGGAGGAGAAGGTGCAGGGCTACATCGACCGGGTCAACGATCAGATCGCGGCCGCGCAGGATCTCGGGAT CCGCGGGACGCCGACGTTCGTCATAAACGGTGAACCCGTGGAGATGGACTCTTTCGACGATATCCTGAGTGCGGTGCGAG AGGAGTTGAAGCGCGAGTGA
Upstream 100 bases:
>100_bases CGGACCGGCCGACGCGCCGGTGACGGTCGTCGAGTACATGGACTACGCCTGACCGGGCTGCGCCACGGCCCACAAGGTCG TGGGTCCGCAGTTGGCGGAC
Downstream 100 bases:
>100_bases GCTTGCAGCGGCTGCTTCGGACCATCGGCGTCCTCGCCCTGGTCGGCCTCGGCATCTCGCTTTACCTGACCTGGGTCTAC ACCACGGACAGAGTGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MARAGEIRYEVHYLPIFPATGPAIFAVQCAGEQGYWWAMHGRILEDQTRGIRAVQTLDDLDALLARYAEELGLDMAAYRQ CLASEEKVQGYIDRVNDQIAAAQDLGIRGTPTFVINGEPVEMDSFDDILSAVREELKRE
Sequences:
>Translated_139_residues MARAGEIRYEVHYLPIFPATGPAIFAVQCAGEQGYWWAMHGRILEDQTRGIRAVQTLDDLDALLARYAEELGLDMAAYRQ CLASEEKVQGYIDRVNDQIAAAQDLGIRGTPTFVINGEPVEMDSFDDILSAVREELKRE >Mature_138_residues ARAGEIRYEVHYLPIFPATGPAIFAVQCAGEQGYWWAMHGRILEDQTRGIRAVQTLDDLDALLARYAEELGLDMAAYRQC LASEEKVQGYIDRVNDQIAAAQDLGIRGTPTFVINGEPVEMDSFDDILSAVREELKRE
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15578; Mature: 15447
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAGEIRYEVHYLPIFPATGPAIFAVQCAGEQGYWWAMHGRILEDQTRGIRAVQTLDDL CCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCEEEEECCEEECHHHCHHHHHHHHHHH DALLARYAEELGLDMAAYRQCLASEEKVQGYIDRVNDQIAAAQDLGIRGTPTFVINGEPV HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC EMDSFDDILSAVREELKRE CCCCHHHHHHHHHHHHCCC >Mature Secondary Structure ARAGEIRYEVHYLPIFPATGPAIFAVQCAGEQGYWWAMHGRILEDQTRGIRAVQTLDDL CCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCEEEEECCEEECHHHCHHHHHHHHHHH DALLARYAEELGLDMAAYRQCLASEEKVQGYIDRVNDQIAAAQDLGIRGTPTFVINGEPV HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC EMDSFDDILSAVREELKRE CCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA