| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893704
Identifier: 51893704
GI number: 51893704
Start: 2754156
End: 2754383
Strand: Reverse
Name: 51893704
Synonym: STH2566
Alternate gene names: NA
Gene position: 2754383-2754156 (Counterclockwise)
Preceding gene: 51893709
Following gene: 51893703
Centisome position: 77.24
GC content: 74.56
Gene sequence:
>228_bases GTGAGCAGGAAGGGTCACGGCAAGCGAGGTTCCTCTGCCGTCTGGGCGGTCACGGCGGCGGCCGTCGCCCTGGTGGCGGT CCTCATCTGCGCCAGCGTCTGGTCGGCCAGGAGCGGCCGGGCGCCGGCCGGCGAGGCGGTCCGCGACGCGGACCTGGGCG CCGTGGGCAACGCCATCGGACCGGCCGACGCGCCGGTGACGGTCGTCGAGTACATGGACTACGCCTGA
Upstream 100 bases:
>100_bases GGCAGCGACCATCGGTCGTCTCCGGGGCAGATCCCGGCCGCTGGAGCGACGTGTCGAAGAACCGAGAGGGCAACAACGGG GCAAAGGATGTGCGACAACA
Downstream 100 bases:
>100_bases CCGGGCTGCGCCACGGCCCACAAGGTCGTGGGTCCGCAGTTGGCGGACATGGCGAGGGCGGGCGAGATCCGCTACGAGGT TCACTACCTGCCGATCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MSRKGHGKRGSSAVWAVTAAAVALVAVLICASVWSARSGRAPAGEAVRDADLGAVGNAIGPADAPVTVVEYMDYA
Sequences:
>Translated_75_residues MSRKGHGKRGSSAVWAVTAAAVALVAVLICASVWSARSGRAPAGEAVRDADLGAVGNAIGPADAPVTVVEYMDYA >Mature_74_residues SRKGHGKRGSSAVWAVTAAAVALVAVLICASVWSARSGRAPAGEAVRDADLGAVGNAIGPADAPVTVVEYMDYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7498; Mature: 7366
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKGHGKRGSSAVWAVTAAAVALVAVLICASVWSARSGRAPAGEAVRDADLGAVGNAIG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCC PADAPVTVVEYMDYA CCCCCCHHHHHHCCC >Mature Secondary Structure SRKGHGKRGSSAVWAVTAAAVALVAVLICASVWSARSGRAPAGEAVRDADLGAVGNAIG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCC PADAPVTVVEYMDYA CCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA