| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893702
Identifier: 51893702
GI number: 51893702
Start: 2753257
End: 2753691
Strand: Reverse
Name: 51893702
Synonym: STH2564
Alternate gene names: NA
Gene position: 2753691-2753257 (Counterclockwise)
Preceding gene: 51893703
Following gene: 51893701
Centisome position: 77.22
GC content: 67.13
Gene sequence:
>435_bases GTGAGCTTGCAGCGGCTGCTTCGGACCATCGGCGTCCTCGCCCTGGTCGGCCTCGGCATCTCGCTTTACCTGACCTGGGT CTACACCACGGACAGAGTGGCGATCTGCCTGGGCAGCGGCGGCTGTGAAACCGTGCAGTACAGCCCCTACGCCTGGATCC TGGGCATCCCGATCCCCACGCTGGGCGCCGGCGCGTACCTGATGGTCCTGGCGCTGGCGGTGCTGGGGCTGCGCGGCTCG CAGCCGGCCGAGTGGGTGGTGCTGGCGCTGTTTGGCACGGCGCTGGTGGGGCTTCTGTTCTCGGCGTACCTGACCTACCT GGAGCTGTTCGTGATCCATGCGATCTGCCTGTGGTGCGCGGTGTCGGCGGTGATCCAGCTGTTCCTCTTCACCCTGGCGG TCGTCGTCTGGCGTCGGTTCCAGGAGGCTGTATAG
Upstream 100 bases:
>100_bases GGATCCGCGGGACGCCGACGTTCGTCATAAACGGTGAACCCGTGGAGATGGACTCTTTCGACGATATCCTGAGTGCGGTG CGAGAGGAGTTGAAGCGCGA
Downstream 100 bases:
>100_bases CTTTTTCGCGGCCGGTCATATACTACTACGGCAGATACCCTCGGCTTCGAGACGCTTCGTGCGATCCCTCGGAGCCGATT TCTTGCAAAGAGGGGTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSLQRLLRTIGVLALVGLGISLYLTWVYTTDRVAICLGSGGCETVQYSPYAWILGIPIPTLGAGAYLMVLALAVLGLRGS QPAEWVVLALFGTALVGLLFSAYLTYLELFVIHAICLWCAVSAVIQLFLFTLAVVVWRRFQEAV
Sequences:
>Translated_144_residues MSLQRLLRTIGVLALVGLGISLYLTWVYTTDRVAICLGSGGCETVQYSPYAWILGIPIPTLGAGAYLMVLALAVLGLRGS QPAEWVVLALFGTALVGLLFSAYLTYLELFVIHAICLWCAVSAVIQLFLFTLAVVVWRRFQEAV >Mature_143_residues SLQRLLRTIGVLALVGLGISLYLTWVYTTDRVAICLGSGGCETVQYSPYAWILGIPIPTLGAGAYLMVLALAVLGLRGSQ PAEWVVLALFGTALVGLLFSAYLTYLELFVIHAICLWCAVSAVIQLFLFTLAVVVWRRFQEAV
Specific function: Unknown
COG id: COG4243
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15655; Mature: 15524
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQRLLRTIGVLALVGLGISLYLTWVYTTDRVAICLGSGGCETVQYSPYAWILGIPIPT CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCEEECCEEEEEECCCCC LGAGAYLMVLALAVLGLRGSQPAEWVVLALFGTALVGLLFSAYLTYLELFVIHAICLWCA CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSAVIQLFLFTLAVVVWRRFQEAV HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLQRLLRTIGVLALVGLGISLYLTWVYTTDRVAICLGSGGCETVQYSPYAWILGIPIPT CHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCEEECCEEEEEECCCCC LGAGAYLMVLALAVLGLRGSQPAEWVVLALFGTALVGLLFSAYLTYLELFVIHAICLWCA CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSAVIQLFLFTLAVVVWRRFQEAV HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA