Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

Click here to switch to the map view.

The map label for this gene is 51893702

Identifier: 51893702

GI number: 51893702

Start: 2753257

End: 2753691

Strand: Reverse

Name: 51893702

Synonym: STH2564

Alternate gene names: NA

Gene position: 2753691-2753257 (Counterclockwise)

Preceding gene: 51893703

Following gene: 51893701

Centisome position: 77.22

GC content: 67.13

Gene sequence:

>435_bases
GTGAGCTTGCAGCGGCTGCTTCGGACCATCGGCGTCCTCGCCCTGGTCGGCCTCGGCATCTCGCTTTACCTGACCTGGGT
CTACACCACGGACAGAGTGGCGATCTGCCTGGGCAGCGGCGGCTGTGAAACCGTGCAGTACAGCCCCTACGCCTGGATCC
TGGGCATCCCGATCCCCACGCTGGGCGCCGGCGCGTACCTGATGGTCCTGGCGCTGGCGGTGCTGGGGCTGCGCGGCTCG
CAGCCGGCCGAGTGGGTGGTGCTGGCGCTGTTTGGCACGGCGCTGGTGGGGCTTCTGTTCTCGGCGTACCTGACCTACCT
GGAGCTGTTCGTGATCCATGCGATCTGCCTGTGGTGCGCGGTGTCGGCGGTGATCCAGCTGTTCCTCTTCACCCTGGCGG
TCGTCGTCTGGCGTCGGTTCCAGGAGGCTGTATAG

Upstream 100 bases:

>100_bases
GGATCCGCGGGACGCCGACGTTCGTCATAAACGGTGAACCCGTGGAGATGGACTCTTTCGACGATATCCTGAGTGCGGTG
CGAGAGGAGTTGAAGCGCGA

Downstream 100 bases:

>100_bases
CTTTTTCGCGGCCGGTCATATACTACTACGGCAGATACCCTCGGCTTCGAGACGCTTCGTGCGATCCCTCGGAGCCGATT
TCTTGCAAAGAGGGGTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSLQRLLRTIGVLALVGLGISLYLTWVYTTDRVAICLGSGGCETVQYSPYAWILGIPIPTLGAGAYLMVLALAVLGLRGS
QPAEWVVLALFGTALVGLLFSAYLTYLELFVIHAICLWCAVSAVIQLFLFTLAVVVWRRFQEAV

Sequences:

>Translated_144_residues
MSLQRLLRTIGVLALVGLGISLYLTWVYTTDRVAICLGSGGCETVQYSPYAWILGIPIPTLGAGAYLMVLALAVLGLRGS
QPAEWVVLALFGTALVGLLFSAYLTYLELFVIHAICLWCAVSAVIQLFLFTLAVVVWRRFQEAV
>Mature_143_residues
SLQRLLRTIGVLALVGLGISLYLTWVYTTDRVAICLGSGGCETVQYSPYAWILGIPIPTLGAGAYLMVLALAVLGLRGSQ
PAEWVVLALFGTALVGLLFSAYLTYLELFVIHAICLWCAVSAVIQLFLFTLAVVVWRRFQEAV

Specific function: Unknown

COG id: COG4243

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15655; Mature: 15524

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQRLLRTIGVLALVGLGISLYLTWVYTTDRVAICLGSGGCETVQYSPYAWILGIPIPT
CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCEEECCEEEEEECCCCC
LGAGAYLMVLALAVLGLRGSQPAEWVVLALFGTALVGLLFSAYLTYLELFVIHAICLWCA
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSAVIQLFLFTLAVVVWRRFQEAV
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLQRLLRTIGVLALVGLGISLYLTWVYTTDRVAICLGSGGCETVQYSPYAWILGIPIPT
CHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCEEECCEEEEEECCCCC
LGAGAYLMVLALAVLGLRGSQPAEWVVLALFGTALVGLLFSAYLTYLELFVIHAICLWCA
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSAVIQLFLFTLAVVVWRRFQEAV
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA