| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is livK [C]
Identifier: 51893499
GI number: 51893499
Start: 2551404
End: 2552591
Strand: Reverse
Name: livK [C]
Synonym: STH2361
Alternate gene names: 51893499
Gene position: 2552591-2551404 (Counterclockwise)
Preceding gene: 51893500
Following gene: 51893498
Centisome position: 71.58
GC content: 69.87
Gene sequence:
>1188_bases GTGTCTCTGCGCGGGGCGCAACGTGCCCGGTTCTGGCTGGCATGGGTTCTGGCGTTTTCGGTGGTGCTGGCCGGTTGTAG CTCCGCCGCGACGGCGCCGTCGGGGGCGCAGGGATCCGCAGGGAGCCAGAACGGGGCGCAGGGGGAGGTGCTCATCGGCG TGATGGGGCCTCTGACCGGGGACAGCGCCGAGTACGGCAAGATCTGGCGCCGGGGCTTTGACCTGGCCCTGGAGGAGATC AACGCCGCCGGCGGGGTGCAGGGCCGGCCGCTGAACTACGTGTTTGAGGACACCCAGAGCGATCCCAAACAGAGCCCGGC CGTCGCCCAGAAGTTCGTCAATGACCCGCGGGTCGTGGCGGTCATCGGCGACTTCAGCTCGCCCGCTTCCATGGCCGCCT CGCCCATCTTCCAGCGGGCCGGGCTGGTGCAGCTGGGCATCACCAACTCGCACCCGGACTTCACCAAGACCGGCGACTTC ATCTGGAGCAACTCCACCAGCCAGACGGACGAGGCGCCCTTCCTGGCCCGGCTGGCGGTGGAGCAGCTGGGCCGGAAGCG GCTGGCGGTGCTGCACCAGAACACCGATTGGGGCAAGACCACCGCCGATCTGTTCGTCGAGCAGGCCCGGGCCCTGGGCG CCGAGGTGGTGCTGCAGGAGGCCTATCTACTTACCGAAAAGGACTTCCGCCCGGTTCTGACCAAGGCCCGGGACGCCCAG CCTGACGCTCTGGTGCTGATTTCCTACTACAACGACGGAGCGCTGATCGCCCAGCAGATCCCCGCGGTGGGGCTGGACGT GACCGTGCTGGCCGCCAGCTCGGTCTACTCGCCCCAGTTCCTCAACCTGGGCGGGGCGGCGGTGGAGGGGGTCTACACGG TGAGCCGGTTCCACCCGGCGGATCCCCGCCCCGAGGCGCAGCAGTTCGTGGAGCGGTTCCGGGAGCGGTACGGCACGGAC CCCGACACCTTCGCCGCCGGGGCGTACGACGGGATGAAGATCCTGGCCGCGGTGCTGAACCGGGTGGGGGTGGACCGCAA GGCCCTGCGGGACGGCCTGGAGCAGGCCGAGCACCTGGAGACCATCCTGCAGGGCGCCACCGCCTTCGGCGAGGACCGGC GGCTCCGCAACCCCCGCTTCGTACCGCTGGTGGTCCGTGGCGGCGCCTTTGCGATCTGGAACCCGTAG
Upstream 100 bases:
>100_bases ATAATGCTACGCTTCAATGCAACCTATTCCGACCGGAATACGTGAGATTTCGGGTCGGCCATCGCACGCGTGAAAACACG GAGAAAGGGGAGTGGTTCTG
Downstream 100 bases:
>100_bases GAGGGGGAGCATGCTGGACCAGCTGATCAACGGCCTGGTGGTTGGCAACCTCTACGCCCTCACGGCGGTGGGCATCACCC AGATCTACGGCGTGGCCAAC
Product: branched chain amino acid ABC transporter substrate-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSLRGAQRARFWLAWVLAFSVVLAGCSSAATAPSGAQGSAGSQNGAQGEVLIGVMGPLTGDSAEYGKIWRRGFDLALEEI NAAGGVQGRPLNYVFEDTQSDPKQSPAVAQKFVNDPRVVAVIGDFSSPASMAASPIFQRAGLVQLGITNSHPDFTKTGDF IWSNSTSQTDEAPFLARLAVEQLGRKRLAVLHQNTDWGKTTADLFVEQARALGAEVVLQEAYLLTEKDFRPVLTKARDAQ PDALVLISYYNDGALIAQQIPAVGLDVTVLAASSVYSPQFLNLGGAAVEGVYTVSRFHPADPRPEAQQFVERFRERYGTD PDTFAAGAYDGMKILAAVLNRVGVDRKALRDGLEQAEHLETILQGATAFGEDRRLRNPRFVPLVVRGGAFAIWNP
Sequences:
>Translated_395_residues MSLRGAQRARFWLAWVLAFSVVLAGCSSAATAPSGAQGSAGSQNGAQGEVLIGVMGPLTGDSAEYGKIWRRGFDLALEEI NAAGGVQGRPLNYVFEDTQSDPKQSPAVAQKFVNDPRVVAVIGDFSSPASMAASPIFQRAGLVQLGITNSHPDFTKTGDF IWSNSTSQTDEAPFLARLAVEQLGRKRLAVLHQNTDWGKTTADLFVEQARALGAEVVLQEAYLLTEKDFRPVLTKARDAQ PDALVLISYYNDGALIAQQIPAVGLDVTVLAASSVYSPQFLNLGGAAVEGVYTVSRFHPADPRPEAQQFVERFRERYGTD PDTFAAGAYDGMKILAAVLNRVGVDRKALRDGLEQAEHLETILQGATAFGEDRRLRNPRFVPLVVRGGAFAIWNP >Mature_394_residues SLRGAQRARFWLAWVLAFSVVLAGCSSAATAPSGAQGSAGSQNGAQGEVLIGVMGPLTGDSAEYGKIWRRGFDLALEEIN AAGGVQGRPLNYVFEDTQSDPKQSPAVAQKFVNDPRVVAVIGDFSSPASMAASPIFQRAGLVQLGITNSHPDFTKTGDFI WSNSTSQTDEAPFLARLAVEQLGRKRLAVLHQNTDWGKTTADLFVEQARALGAEVVLQEAYLLTEKDFRPVLTKARDAQP DALVLISYYNDGALIAQQIPAVGLDVTVLAASSVYSPQFLNLGGAAVEGVYTVSRFHPADPRPEAQQFVERFRERYGTDP DTFAAGAYDGMKILAAVLNRVGVDRKALRDGLEQAEHLETILQGATAFGEDRRLRNPRFVPLVVRGGAFAIWNP
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=320, Percent_Identity=26.5625, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI48994941, Length=294, Percent_Identity=26.530612244898, Blast_Score=110, Evalue=2e-25,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42523; Mature: 42392
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRGAQRARFWLAWVLAFSVVLAGCSSAATAPSGAQGSAGSQNGAQGEVLIGVMGPLTG CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC DSAEYGKIWRRGFDLALEEINAAGGVQGRPLNYVFEDTQSDPKQSPAVAQKFVNDPRVVA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHCCCCEEEE VIGDFSSPASMAASPIFQRAGLVQLGITNSHPDFTKTGDFIWSNSTSQTDEAPFLARLAV EEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHH EQLGRKRLAVLHQNTDWGKTTADLFVEQARALGAEVVLQEAYLLTEKDFRPVLTKARDAQ HHHCHHHEEHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC PDALVLISYYNDGALIAQQIPAVGLDVTVLAASSVYSPQFLNLGGAAVEGVYTVSRFHPA CCEEEEEEEECCCCHHHHHCCCCCCCEEEEECCCCCCCHHCCCCCHHHHHHHHHHHCCCC DPRPEAQQFVERFRERYGTDPDTFAAGAYDGMKILAAVLNRVGVDRKALRDGLEQAEHLE CCCHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TILQGATAFGEDRRLRNPRFVPLVVRGGAFAIWNP HHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEECC >Mature Secondary Structure SLRGAQRARFWLAWVLAFSVVLAGCSSAATAPSGAQGSAGSQNGAQGEVLIGVMGPLTG CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC DSAEYGKIWRRGFDLALEEINAAGGVQGRPLNYVFEDTQSDPKQSPAVAQKFVNDPRVVA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHCCCCEEEE VIGDFSSPASMAASPIFQRAGLVQLGITNSHPDFTKTGDFIWSNSTSQTDEAPFLARLAV EEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHH EQLGRKRLAVLHQNTDWGKTTADLFVEQARALGAEVVLQEAYLLTEKDFRPVLTKARDAQ HHHCHHHEEHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC PDALVLISYYNDGALIAQQIPAVGLDVTVLAASSVYSPQFLNLGGAAVEGVYTVSRFHPA CCEEEEEEEECCCCHHHHHCCCCCCCEEEEECCCCCCCHHCCCCCHHHHHHHHHHHCCCC DPRPEAQQFVERFRERYGTDPDTFAAGAYDGMKILAAVLNRVGVDRKALRDGLEQAEHLE CCCHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TILQGATAFGEDRRLRNPRFVPLVVRGGAFAIWNP HHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA