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The map label for this gene is dmsC1 [H]

Identifier: 51893468

GI number: 51893468

Start: 2516441

End: 2517289

Strand: Reverse

Name: dmsC1 [H]

Synonym: STH2330

Alternate gene names: 51893468

Gene position: 2517289-2516441 (Counterclockwise)

Preceding gene: 51893469

Following gene: 51893467

Centisome position: 70.59

GC content: 69.38

Gene sequence:

>849_bases
ATGCACGACTGGTCGTTGATTCTCTACACGCTCTGCCTGCAGTCGTCCGTGGGCATCTACGTGGCGAGCCGGCTGGTGCT
GTGGAATGCGGAATCGAAGGAGGCGCGGATGCGCTTCCTGTACCTGGCCCTGGGCCTGGGCATCGCGGGCGTGCTGGCCT
CGCTGACGCACCTGGGGTACCCGCTCAACGCGCTGAAGACGATGGGGAACCTGGGCACGTCGTGGCTGAGCCGTGAGATC
CTGCTGACGCTGCTGTTCGGCGTGACCGGCATCGCGAGCGTGGTGCTGGAGCGGCAGGAGGTGGGCAGCCGCGAGACGAG
AAACGGCTGGGCGGTGCTGACGAGCCTGGCGGGCCTTGCGCTGATCTACGTCATGTCGATGATCTACCGCACCACGGCCT
TCCCCGCCTGGACGCACGTGTCGACGACGCTGGTGTTCTACGCCACTGCGGGGCTGATCGGCACGTCGGCGGTGTTCGCC
GGGCTGTGCTGCCGGACCGGTGGGGAGGAACCCCGGGGCCTGATGGGTCTGGTGGTGGGCGCCATGGCGATGCTGGCCCT
GCAGGTGATGGCGCTGGCGCTGCACGGGGTGTACCTGGGCACGGCCGGTCCCGAGGCGCAGGCCACCGCCGCCCTGATCG
CGGGGGAGTGGTCGGCGCTGTACTGGAGCCAGATCGTGTGCATCGCCGCCGGGACGGGGATCATGATGCCGCTGGTCTGG
CGGCGGGTGGCCCAGAAGAAGCTGGCGAACATGCCGCAGTTCGCCGGCGCCCTGGTGGCGCTGGTGGCCCTGGGCGAGCT
GGCCGGCCGGGTGGTGTTCTACGCCACGCGGGTCAAGATCGGGCTGTAG

Upstream 100 bases:

>100_bases
TGCAGGGGCTGGCCGATCCGTCCCGTACCCGCCCGTCCCTCCTGGTCAACCCGCCGACCGGGGCCATCAGCTCGCCGATT
GGAGGGAGCCGCAAGTGAAC

Downstream 100 bases:

>100_bases
CGCCTCCGCCGCTGCGCTGAAAGCTCGCTGCCCCGGTCCGCCCATGGACGGGCGAACCGGGAACGCGGCCCCGGCTCCCC
CCGACGGGGCGGGCTGGGGC

Product: anaerobic dimethyl sulfoxide reductase subunit C

Products: NA

Alternate protein names: DMSO reductase anchor subunit ynfH [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MHDWSLILYTLCLQSSVGIYVASRLVLWNAESKEARMRFLYLALGLGIAGVLASLTHLGYPLNALKTMGNLGTSWLSREI
LLTLLFGVTGIASVVLERQEVGSRETRNGWAVLTSLAGLALIYVMSMIYRTTAFPAWTHVSTTLVFYATAGLIGTSAVFA
GLCCRTGGEEPRGLMGLVVGAMAMLALQVMALALHGVYLGTAGPEAQATAALIAGEWSALYWSQIVCIAAGTGIMMPLVW
RRVAQKKLANMPQFAGALVALVALGELAGRVVFYATRVKIGL

Sequences:

>Translated_282_residues
MHDWSLILYTLCLQSSVGIYVASRLVLWNAESKEARMRFLYLALGLGIAGVLASLTHLGYPLNALKTMGNLGTSWLSREI
LLTLLFGVTGIASVVLERQEVGSRETRNGWAVLTSLAGLALIYVMSMIYRTTAFPAWTHVSTTLVFYATAGLIGTSAVFA
GLCCRTGGEEPRGLMGLVVGAMAMLALQVMALALHGVYLGTAGPEAQATAALIAGEWSALYWSQIVCIAAGTGIMMPLVW
RRVAQKKLANMPQFAGALVALVALGELAGRVVFYATRVKIGL
>Mature_282_residues
MHDWSLILYTLCLQSSVGIYVASRLVLWNAESKEARMRFLYLALGLGIAGVLASLTHLGYPLNALKTMGNLGTSWLSREI
LLTLLFGVTGIASVVLERQEVGSRETRNGWAVLTSLAGLALIYVMSMIYRTTAFPAWTHVSTTLVFYATAGLIGTSAVFA
GLCCRTGGEEPRGLMGLVVGAMAMLALQVMALALHGVYLGTAGPEAQATAALIAGEWSALYWSQIVCIAAGTGIMMPLVW
RRVAQKKLANMPQFAGALVALVALGELAGRVVFYATRVKIGL

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. The C subunit anchors the other two subunits to the membrane and stabilize the catalytic subunits [H]

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli dmsC [H]

Homologues:

Organism=Escherichia coli, GI1787873, Length=293, Percent_Identity=27.3037542662116, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787123, Length=291, Percent_Identity=26.1168384879725, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007059 [H]

Pfam domain/function: PF04976 DmsC [H]

EC number: NA

Molecular weight: Translated: 30059; Mature: 30059

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDWSLILYTLCLQSSVGIYVASRLVLWNAESKEARMRFLYLALGLGIAGVLASLTHLGY
CCCHHHHHHHHHHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLNALKTMGNLGTSWLSREILLTLLFGVTGIASVVLERQEVGSRETRNGWAVLTSLAGLA
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LIYVMSMIYRTTAFPAWTHVSTTLVFYATAGLIGTSAVFAGLCCRTGGEEPRGLMGLVVG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AMAMLALQVMALALHGVYLGTAGPEAQATAALIAGEWSALYWSQIVCIAAGTGIMMPLVW
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
RRVAQKKLANMPQFAGALVALVALGELAGRVVFYATRVKIGL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECC
>Mature Secondary Structure
MHDWSLILYTLCLQSSVGIYVASRLVLWNAESKEARMRFLYLALGLGIAGVLASLTHLGY
CCCHHHHHHHHHHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLNALKTMGNLGTSWLSREILLTLLFGVTGIASVVLERQEVGSRETRNGWAVLTSLAGLA
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LIYVMSMIYRTTAFPAWTHVSTTLVFYATAGLIGTSAVFAGLCCRTGGEEPRGLMGLVVG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AMAMLALQVMALALHGVYLGTAGPEAQATAALIAGEWSALYWSQIVCIAAGTGIMMPLVW
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
RRVAQKKLANMPQFAGALVALVALGELAGRVVFYATRVKIGL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]