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The map label for this gene is rbr [H]

Identifier: 51893467

GI number: 51893467

Start: 2515539

End: 2516129

Strand: Reverse

Name: rbr [H]

Synonym: STH2329

Alternate gene names: 51893467

Gene position: 2516129-2515539 (Counterclockwise)

Preceding gene: 51893468

Following gene: 51893461

Centisome position: 70.56

GC content: 65.65

Gene sequence:

>591_bases
ATGAACCTGAAAGGCACCAGGACGCTGGAGAACCTGCTGAAGGCGTTTGCGGGGGAGAGCCAGGCCCAGGCCCGGTACAT
GATGTACGCCAAGGTCGCCCGGGACGAGGGGCTGGAGCAGATCGCCGCGATCTTCGAGGAGACAGCCCTGAACGAGGCGG
AGCACGGGAAGCGGTTCTTCAGCCTGGCCGCAGCCGGGCTGGAGGGTGAGATGCCGGCCGACGTGGAGATCCAGGCCGCG
TACCCGATCGCGATCGGCAACACCGTGGAGAACCTGAAGGCCGCCGCCGCCGGCGAGCACCACGAGTGGGCCGAGATGTA
CCCCGAGTTCGCGGACATCGCGGAGGCGGAGGGGTTCAAGGAGATCGCCACGGCGTTCCGGATGATCGCCAAGGCGGAGA
CCGCGCACGAGACCCGCTACCGCAAGCTGGTGGAGAACCTGGAGAAGGGCGTCGTCTTCCAGCGCGACGGCAAGTACTTC
TGGAAGTGCCGCAACTGCGGGTACATCCACGAGGGCACGGCCGCGCCGAAGTTCTGCCCGGCATGCCAGTACCCGCAGGC
GTACTTTGAGATCTTCGTGGAGAACTACTAA

Upstream 100 bases:

>100_bases
GCATGGGTCCTTTGGACAAGTGAAACCGAGAACAAACTCGGGTAGAATGGGGATGTACACCAGCGACCGCGGACCCCTCG
CTGGGGAAAGGAGAATCCGT

Downstream 100 bases:

>100_bases
GTTTAAGGAAGGCGCGCGACGGCCCCTGTGCCCGGTCCCGGGCACAGGGGCCGCGCTTTTCGTCTGCTACCGGCTGTCCT
CCCCGAGGCTGCGCGCCTCC

Product: rubrerythrin

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNLKGTRTLENLLKAFAGESQAQARYMMYAKVARDEGLEQIAAIFEETALNEAEHGKRFFSLAAAGLEGEMPADVEIQAA
YPIAIGNTVENLKAAAAGEHHEWAEMYPEFADIAEAEGFKEIATAFRMIAKAETAHETRYRKLVENLEKGVVFQRDGKYF
WKCRNCGYIHEGTAAPKFCPACQYPQAYFEIFVENY

Sequences:

>Translated_196_residues
MNLKGTRTLENLLKAFAGESQAQARYMMYAKVARDEGLEQIAAIFEETALNEAEHGKRFFSLAAAGLEGEMPADVEIQAA
YPIAIGNTVENLKAAAAGEHHEWAEMYPEFADIAEAEGFKEIATAFRMIAKAETAHETRYRKLVENLEKGVVFQRDGKYF
WKCRNCGYIHEGTAAPKFCPACQYPQAYFEIFVENY
>Mature_196_residues
MNLKGTRTLENLLKAFAGESQAQARYMMYAKVARDEGLEQIAAIFEETALNEAEHGKRFFSLAAAGLEGEMPADVEIQAA
YPIAIGNTVENLKAAAAGEHHEWAEMYPEFADIAEAEGFKEIATAFRMIAKAETAHETRYRKLVENLEKGVVFQRDGKYF
WKCRNCGYIHEGTAAPKFCPACQYPQAYFEIFVENY

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 22039; Mature: 22039

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKGTRTLENLLKAFAGESQAQARYMMYAKVARDEGLEQIAAIFEETALNEAEHGKRFF
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH
SLAAAGLEGEMPADVEIQAAYPIAIGNTVENLKAAAAGEHHEWAEMYPEFADIAEAEGFK
HHHHHCCCCCCCCCEEEEEECCEEECCHHHHHHHHHCCCCHHHHHHCHHHHHHHHHCCHH
EIATAFRMIAKAETAHETRYRKLVENLEKGVVFQRDGKYFWKCRNCGYIHEGTAAPKFCP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCEECCCCCCCCCC
ACQYPQAYFEIFVENY
CCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNLKGTRTLENLLKAFAGESQAQARYMMYAKVARDEGLEQIAAIFEETALNEAEHGKRFF
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH
SLAAAGLEGEMPADVEIQAAYPIAIGNTVENLKAAAAGEHHEWAEMYPEFADIAEAEGFK
HHHHHCCCCCCCCCEEEEEECCEEECCHHHHHHHHHCCCCHHHHHHCHHHHHHHHHCCHH
EIATAFRMIAKAETAHETRYRKLVENLEKGVVFQRDGKYFWKCRNCGYIHEGTAAPKFCP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCEECCCCCCCCCC
ACQYPQAYFEIFVENY
CCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8955396; 11792842 [H]